RNA–Protein interactions for RNA: ENST00000414670.2

ITGB1-203, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-203ENST00000414670 RNASE3P12724 160 aaKnown RBP4.53□□□□□ -1.68
ITGB1-203ENST00000414670 SRSF9Q13242 221 aaKnown RBP eCLIP4.53□□□□□ -1.68
ITGB1-203ENST00000414670 Q8N1Y9 231 aa4.53□□□□□ -1.68
ITGB1-203ENST00000414670 TMEM141Q96I45 108 aa4.53□□□□□ -1.68
ITGB1-203ENST00000414670 SCGB3A1Q96QR1 104 aa4.53□□□□□ -1.68
ITGB1-203ENST00000414670 MDFIQ99750 246 aa4.53□□□□□ -1.68
ITGB1-203ENST00000414670 LINC00467Q9BRT7 94 aa4.53□□□□□ -1.68
ITGB1-203ENST00000414670 SMIM2Q9BVW6 85 aa4.53□□□□□ -1.68
ITGB1-203ENST00000414670 MSRB1Q9NZV6 116 aa4.53□□□□□ -1.68
ITGB1-203ENST00000414670 MDFICQ9P1T7 246 aa4.53□□□□□ -1.68
ITGB1-203ENST00000414670 PHLDA3Q9Y5J5 127 aa4.53□□□□□ -1.68
ITGB1-203ENST00000414670 TNFRSF18Q9Y5U5 241 aa4.53□□□□□ -1.68
ITGB1-203ENST00000414670 A0A0B4J2C4 111 aa4.52□□□□□ -1.69
ITGB1-203ENST00000414670 FAM240AA0A1B0GVK7 77 aa4.52□□□□□ -1.69
ITGB1-203ENST00000414670 SNCGO76070 127 aa4.52□□□□□ -1.69
ITGB1-203ENST00000414670 TCL1BO95988 128 aa4.52□□□□□ -1.69
ITGB1-203ENST00000414670 IGHV3-30P01768 117 aa4.52□□□□□ -1.69
ITGB1-203ENST00000414670 GIG44P09565 113 aaPredicted RBP4.52□□□□□ -1.69
ITGB1-203ENST00000414670 CFC1BP0CG36 223 aa4.52□□□□□ -1.69
ITGB1-203ENST00000414670 CFC1P0CG37 223 aa4.52□□□□□ -1.69
ITGB1-203ENST00000414670 IGHV3-30-5P0DP03 117 aa4.52□□□□□ -1.69
ITGB1-203ENST00000414670 HTN1P15515 57 aa4.52□□□□□ -1.69
ITGB1-203ENST00000414670 LORP23490 312 aaPredicted RBP4.52□□□□□ -1.69
ITGB1-203ENST00000414670 HERVK_113P61574 105 aa4.52□□□□□ -1.69
ITGB1-203ENST00000414670 EGFEM1PQ0D2K5 195 aa4.52□□□□□ -1.69
ITGB1-203ENST00000414670 SPANXN1Q5VSR9 72 aa4.52□□□□□ -1.69
ITGB1-203ENST00000414670 C1orf158Q8N1D5 194 aa4.52□□□□□ -1.69
ITGB1-203ENST00000414670 C9orf85Q96MD7 179 aa4.52□□□□□ -1.69
ITGB1-203ENST00000414670 PRADC1Q9BSG0 188 aa4.52□□□□□ -1.69
ITGB1-203ENST00000414670 IGHV3OR16-12A0A075B7B8 117 aa4.51□□□□□ -1.69
ITGB1-203ENST00000414670 LOC107984156A0A0G2JMH3 177 aa4.51□□□□□ -1.69
ITGB1-203ENST00000414670 TRBV30A0A0K0K1B3 111 aa4.51□□□□□ -1.69
ITGB1-203ENST00000414670 C11orf86A6NJI1 115 aa4.51□□□□□ -1.69
ITGB1-203ENST00000414670 ZNF815PA8K554 130 aa4.51□□□□□ -1.69
ITGB1-203ENST00000414670 SPRY2O43597 315 aa4.51□□□□□ -1.69
ITGB1-203ENST00000414670 SLC25A20O43772 301 aa4.51□□□□□ -1.69
ITGB1-203ENST00000414670 GAS8-AS1O95177 125 aa4.51□□□□□ -1.69
ITGB1-203ENST00000414670 IGHV3-33P01772 117 aa4.51□□□□□ -1.69
ITGB1-203ENST00000414670 KRTAP10-11P60412 298 aa4.51□□□□□ -1.69
ITGB1-203ENST00000414670 SUMO2P61956 95 aaKnown RBP4.51□□□□□ -1.69
ITGB1-203ENST00000414670 ZNF415Q09FC8 603 aa4.51□□□□□ -1.69
ITGB1-203ENST00000414670 ARL17AQ8IVW1 177 aa4.51□□□□□ -1.69
ITGB1-203ENST00000414670 ANKRD29Q8N6D5 301 aa4.51□□□□□ -1.69
ITGB1-203ENST00000414670 SS18L2Q9UHA2 77 aa4.51□□□□□ -1.69
ITGB1-203ENST00000414670 PCLOQ9Y6V0 5065 aa4.51□□□□□ -1.69
ITGB1-203ENST00000414670 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.5□□□□□ -1.69
ITGB1-203ENST00000414670 TRBV7-7A0A0K0K1E9 115 aa4.5□□□□□ -1.69
ITGB1-203ENST00000414670 TRBV10-2A0A0K0K1G8 114 aa4.5□□□□□ -1.69
ITGB1-203ENST00000414670 IGIPA6NJ69 53 aa4.5□□□□□ -1.69
ITGB1-203ENST00000414670 NXPH4O95158 308 aa4.5□□□□□ -1.69
ITGB1-203ENST00000414670 PRM2P04554 102 aa4.5□□□□□ -1.69
ITGB1-203ENST00000414670 ACYP1P07311 99 aa4.5□□□□□ -1.69
ITGB1-203ENST00000414670 IGHV4-30-4P0DP06 118 aa4.5□□□□□ -1.69
ITGB1-203ENST00000414670 GATA1P15976 413 aaPredicted RBP4.5□□□□□ -1.69
ITGB1-203ENST00000414670 APOC4P55056 127 aa4.5□□□□□ -1.69
ITGB1-203ENST00000414670 RPS28P62857 69 aaKnown RBP4.5□□□□□ -1.69
ITGB1-203ENST00000414670 HERV-K104P63124 156 aa4.5□□□□□ -1.69
ITGB1-203ENST00000414670 CSNK1G2-AS1Q8NCQ2 148 aa4.5□□□□□ -1.69
ITGB1-203ENST00000414670 KIR2DL5BQ8NHK3 375 aa4.5□□□□□ -1.69
ITGB1-203ENST00000414670 BAALCQ8WXS3 180 aa4.5□□□□□ -1.69
ITGB1-203ENST00000414670 RASL10AQ92737 203 aa4.5□□□□□ -1.69
ITGB1-203ENST00000414670 PTH2Q96A98 100 aa4.5□□□□□ -1.69
ITGB1-203ENST00000414670 TIMM17AQ99595 171 aa4.5□□□□□ -1.69
ITGB1-203ENST00000414670 VWFP04275 2813 aa4.49□□□□□ -1.69
ITGB1-203ENST00000414670 SDHAF1A6NFY7 115 aa4.49□□□□□ -1.69
ITGB1-203ENST00000414670 H3BT86 120 aa4.49□□□□□ -1.69
ITGB1-203ENST00000414670 ATP5G1P05496 136 aa4.49□□□□□ -1.69
ITGB1-203ENST00000414670 CRYGDP07320 174 aa4.49□□□□□ -1.69
ITGB1-203ENST00000414670 PMVKQ15126 192 aa4.49□□□□□ -1.69
ITGB1-203ENST00000414670 ATXN8Q156A1 80 aa4.49□□□□□ -1.69
ITGB1-203ENST00000414670 LINC01620Q4KN68 170 aa4.49□□□□□ -1.69
ITGB1-203ENST00000414670 SCGB1D4Q6XE38 83 aa4.49□□□□□ -1.69
ITGB1-203ENST00000414670 C11orf72Q8NBR9 251 aa4.49□□□□□ -1.69
ITGB1-203ENST00000414670 TMEM263Q8WUH6 116 aaKnown RBP4.49□□□□□ -1.69
ITGB1-203ENST00000414670 AMELXQ99217 191 aa4.49□□□□□ -1.69
ITGB1-203ENST00000414670 SPXQ9BT56 116 aa4.49□□□□□ -1.69
ITGB1-203ENST00000414670 DPH3P1Q9H4G8 78 aa4.49□□□□□ -1.69
ITGB1-203ENST00000414670 COL6A5A8TX70 2615 aa4.49□□□□□ -1.69
ITGB1-203ENST00000414670 TRAV4A0A0B4J268 109 aa4.48□□□□□ -1.69
ITGB1-203ENST00000414670 TRBV6-5A0A0K0K1A5 114 aa4.48□□□□□ -1.69
ITGB1-203ENST00000414670 A8MZ25 164 aa4.48□□□□□ -1.69
ITGB1-203ENST00000414670 M0R2P5 195 aa4.48□□□□□ -1.69
ITGB1-203ENST00000414670 VCYO14598 125 aa4.48□□□□□ -1.69
ITGB1-203ENST00000414670 LEPROTO15243 131 aa4.48□□□□□ -1.69
ITGB1-203ENST00000414670 POLR2KP53803 58 aaKnown RBP4.48□□□□□ -1.69
ITGB1-203ENST00000414670 ZNF876PQ49A33 203 aa4.48□□□□□ -1.69
ITGB1-203ENST00000414670 PIK3CD-AS1Q5SR53 167 aa4.48□□□□□ -1.69
ITGB1-203ENST00000414670 C2orf66Q6UXQ4 117 aa4.48□□□□□ -1.69
ITGB1-203ENST00000414670 C14orf178Q8N769 122 aaPredicted RBP4.48□□□□□ -1.69
ITGB1-203ENST00000414670 PLEKHB2Q96CS7 222 aa4.48□□□□□ -1.69
ITGB1-203ENST00000414670 C16orf74Q96GX8 76 aa4.48□□□□□ -1.69
ITGB1-203ENST00000414670 IGLV4-69A0A075B6H9 119 aa4.47□□□□□ -1.69
ITGB1-203ENST00000414670 TRAV8-4A0A0B4J246 113 aa4.47□□□□□ -1.69
ITGB1-203ENST00000414670 SMIM9A6NGZ8 99 aa4.47□□□□□ -1.69
ITGB1-203ENST00000414670 C9JAW5 83 aa4.47□□□□□ -1.69
ITGB1-203ENST00000414670 CCDC179H3BU77 68 aa4.47□□□□□ -1.69
ITGB1-203ENST00000414670 MGPP08493 103 aa4.47□□□□□ -1.69
ITGB1-203ENST00000414670 LINC00315P59091 139 aa4.47□□□□□ -1.69
ITGB1-203ENST00000414670 MEIG1Q5JSS6 88 aa4.47□□□□□ -1.69
ITGB1-203ENST00000414670 TMEM170BQ5T4T1 132 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms