RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 LST1O00453 97 aa10.01□□□□□ -0.81
NUP98-204ENST00000397004 C2orf82Q6UX34 121 aa10.01□□□□□ -0.81
NUP98-204ENST00000397004 TTC32Q5I0X7 151 aa10.01□□□□□ -0.81
NUP98-204ENST00000397004 ZNF625Q96I27 306 aaPredicted RBP10.01□□□□□ -0.81
NUP98-204ENST00000397004 TLN2Q9Y4G6 2542 aa10.01□□□□□ -0.81
NUP98-204ENST00000397004 B5MCH6 92 aa10.01□□□□□ -0.81
NUP98-204ENST00000397004 C15orf53Q8NAA6 179 aa10.01□□□□□ -0.81
NUP98-204ENST00000397004 A0A0U1RRA0 63 aa10.01□□□□□ -0.81
NUP98-204ENST00000397004 UBE2WQ96B02 151 aa10.01□□□□□ -0.81
NUP98-204ENST00000397004 NOTCH3Q9UM47 2321 aa10□□□□□ -0.81
NUP98-204ENST00000397004 JMJD1CQ15652 2540 aa10□□□□□ -0.81
NUP98-204ENST00000397004 IGLV5-45A0A087WSX0 123 aa10□□□□□ -0.81
NUP98-204ENST00000397004 PTPN13Q12923 2485 aa10□□□□□ -0.81
NUP98-204ENST00000397004 C22orf24Q9Y442 160 aa10□□□□□ -0.81
NUP98-204ENST00000397004 IGHV3-53P01767 116 aa9.99□□□□□ -0.81
NUP98-204ENST00000397004 GAGE2BQ13066 116 aa9.99□□□□□ -0.81
NUP98-204ENST00000397004 GAGE2EQ4V326 116 aa9.99□□□□□ -0.81
NUP98-204ENST00000397004 LINC00242Q5T6M2 205 aa9.99□□□□□ -0.81
NUP98-204ENST00000397004 UBE2E2Q96LR5 201 aa9.99□□□□□ -0.81
NUP98-204ENST00000397004 SPANXA1Q9NS26 97 aa9.99□□□□□ -0.81
NUP98-204ENST00000397004 GAGE2DQ9UEU5 116 aa9.99□□□□□ -0.81
NUP98-204ENST00000397004 ZFYVE26Q68DK2 2539 aa9.99□□□□□ -0.81
NUP98-204ENST00000397004 TRAV8-4A0A0B4J246 113 aa9.99□□□□□ -0.81
NUP98-204ENST00000397004 SNCGO76070 127 aa9.98□□□□□ -0.81
NUP98-204ENST00000397004 NTM-AS1Q6ZSK4 140 aa9.98□□□□□ -0.81
NUP98-204ENST00000397004 WNK1Q9H4A3 2382 aa9.97□□□□□ -0.81
NUP98-204ENST00000397004 LRRK2Q5S007 2527 aa9.97□□□□□ -0.81
NUP98-204ENST00000397004 MAP6D1Q9H9H5 199 aa9.97□□□□□ -0.81
NUP98-204ENST00000397004 NDUFA1O15239 70 aa9.97□□□□□ -0.81
NUP98-204ENST00000397004 DEFB121Q5J5C9 76 aa9.97□□□□□ -0.81
NUP98-204ENST00000397004 LINC00308Q8TCZ7 52 aa9.97□□□□□ -0.81
NUP98-204ENST00000397004 IGLV5-39A0A0G2JS06 123 aa9.97□□□□□ -0.81
NUP98-204ENST00000397004 GAGE5Q13069 117 aa9.97□□□□□ -0.81
NUP98-204ENST00000397004 GAGE6Q13070 117 aa9.97□□□□□ -0.81
NUP98-204ENST00000397004 BEAN1Q3B7T3 259 aa9.97□□□□□ -0.81
NUP98-204ENST00000397004 SETD2Q9BYW2 2564 aaPredicted RBP9.96□□□□□ -0.81
NUP98-204ENST00000397004 VPREB3Q9UKI3 123 aa9.96□□□□□ -0.81
NUP98-204ENST00000397004 Q96MF0 132 aa9.96□□□□□ -0.82
NUP98-204ENST00000397004 Q9H8V8 135 aa9.96□□□□□ -0.82
NUP98-204ENST00000397004 CR1P17927 2039 aa9.95□□□□□ -0.82
NUP98-204ENST00000397004 FAM208BQ5VWN6 2430 aa9.95□□□□□ -0.82
NUP98-204ENST00000397004 SMIM1B2RUZ4 78 aa9.95□□□□□ -0.82
NUP98-204ENST00000397004 SMCR5Q8TEV8 140 aa9.95□□□□□ -0.82
NUP98-204ENST00000397004 H3BT86 120 aa9.95□□□□□ -0.82
NUP98-204ENST00000397004 TIMM17BO60830 172 aa9.95□□□□□ -0.82
NUP98-204ENST00000397004 TIRAPP58753 221 aa9.95□□□□□ -0.82
NUP98-204ENST00000397004 FAM218AQ96MZ4 157 aa9.95□□□□□ -0.82
NUP98-204ENST00000397004 LINC01587Q99440 93 aa9.95□□□□□ -0.82
NUP98-204ENST00000397004 NAV2Q8IVL1 2488 aa9.94□□□□□ -0.82
NUP98-204ENST00000397004 RS1O15537 224 aa9.94□□□□□ -0.82
NUP98-204ENST00000397004 Q6YL49 198 aa9.94□□□□□ -0.82
NUP98-204ENST00000397004 SONP18583 2426 aaKnown RBP9.94□□□□□ -0.82
NUP98-204ENST00000397004 FSHBP01225 129 aa9.94□□□□□ -0.82
NUP98-204ENST00000397004 IFITM1P13164 125 aa9.94□□□□□ -0.82
NUP98-204ENST00000397004 ZNF415Q09FC8 603 aa9.94□□□□□ -0.82
NUP98-204ENST00000397004 F5H768 121 aa9.93□□□□□ -0.82
NUP98-204ENST00000397004 Q6Q795 121 aa9.93□□□□□ -0.82
NUP98-204ENST00000397004 C1orf158Q8N1D5 194 aa9.93□□□□□ -0.82
NUP98-204ENST00000397004 LINC01356Q8N9X3 169 aa9.93□□□□□ -0.82
NUP98-204ENST00000397004 XCL2Q9UBD3 114 aa9.93□□□□□ -0.82
NUP98-204ENST00000397004 SHISA2Q6UWI4 295 aa9.93□□□□□ -0.82
NUP98-204ENST00000397004 PIK3CD-AS1Q5SR53 167 aa9.92□□□□□ -0.82
NUP98-204ENST00000397004 KMT2BQ9UMN6 2715 aaPredicted RBP9.92□□□□□ -0.82
NUP98-204ENST00000397004 APCP25054 2843 aa9.92□□□□□ -0.82
NUP98-204ENST00000397004 SVIPQ8NHG7 77 aa9.92□□□□□ -0.82
NUP98-204ENST00000397004 ZNF462Q96JM2 2506 aa9.92□□□□□ -0.82
NUP98-204ENST00000397004 ODF3L2Q3SX64 289 aa9.91□□□□□ -0.82
NUP98-204ENST00000397004 IL17DQ8TAD2 202 aa9.91□□□□□ -0.82
NUP98-204ENST00000397004 TRAV13-1A0A0B4J241 112 aa9.91□□□□□ -0.82
NUP98-204ENST00000397004 DEFB114Q30KQ6 69 aa9.91□□□□□ -0.82
NUP98-204ENST00000397004 CHCHD5Q9BSY4 110 aa9.91□□□□□ -0.82
NUP98-204ENST00000397004 COX6CP09669 75 aa9.9□□□□□ -0.82
NUP98-204ENST00000397004 PLA2G2AP14555 144 aa9.89□□□□□ -0.83
NUP98-204ENST00000397004 Q6ZTI0 123 aa9.89□□□□□ -0.83
NUP98-204ENST00000397004 DNAJC30Q96LL9 226 aa9.89□□□□□ -0.83
NUP98-204ENST00000397004 GAGE12JA6NER3 117 aa9.89□□□□□ -0.83
NUP98-204ENST00000397004 GAGE7O76087 117 aa9.89□□□□□ -0.83
NUP98-204ENST00000397004 GAGE12FP0CL80 117 aa9.89□□□□□ -0.83
NUP98-204ENST00000397004 GAGE12GP0CL81 117 aa9.89□□□□□ -0.83
NUP98-204ENST00000397004 GAGE12IP0CL82 117 aa9.89□□□□□ -0.83
NUP98-204ENST00000397004 GAGE4Q13068 117 aa9.89□□□□□ -0.83
NUP98-204ENST00000397004 FAM19A3Q7Z5A8 133 aa9.89□□□□□ -0.83
NUP98-204ENST00000397004 YAE1D1Q9NRH1 226 aa9.89□□□□□ -0.83
NUP98-204ENST00000397004 C9orf129Q5T035 196 aaKnown RBP9.88□□□□□ -0.83
NUP98-204ENST00000397004 FAM240AA0A1B0GVK7 77 aa9.88□□□□□ -0.83
NUP98-204ENST00000397004 KRTAP10-9P60411 292 aa9.88□□□□□ -0.83
NUP98-204ENST00000397004 C3orf56Q8N813 242 aa9.88□□□□□ -0.83
NUP98-204ENST00000397004 COX7A2LO14548 114 aa9.88□□□□□ -0.83
NUP98-204ENST00000397004 CDC42SE2Q9NRR3 84 aa9.88□□□□□ -0.83
NUP98-204ENST00000397004 LOC100131303A0A0U1RQF7 123 aa9.87□□□□□ -0.83
NUP98-204ENST00000397004 IGHV4-31P0DP07 118 aa9.87□□□□□ -0.83
NUP98-204ENST00000397004 TRGV1A0A0A0MS02 117 aa9.87□□□□□ -0.83
NUP98-204ENST00000397004 ITPR3Q14573 2671 aa9.86□□□□□ -0.83
NUP98-204ENST00000397004 GIG44P09565 113 aaPredicted RBP9.86□□□□□ -0.83
NUP98-204ENST00000397004 DSCR9P59020 149 aa9.86□□□□□ -0.83
NUP98-204ENST00000397004 DGAT2L7PQ6IED9 249 aa9.86□□□□□ -0.83
NUP98-204ENST00000397004 TRBV7-7A0A0K0K1E9 115 aa9.86□□□□□ -0.83
NUP98-204ENST00000397004 HERVK_113P63121 156 aa9.86□□□□□ -0.83
NUP98-204ENST00000397004 DAZ2Q13117 558 aaKnown RBP9.86□□□□□ -0.83
NUP98-204ENST00000397004 DAZ4Q86SG3 579 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms