RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 PRSS47A8MTI9 375 aa13.14□□□□□ -0.31
SNCA-203ENST00000394986 UBE2D4Q9Y2X8 147 aa13.14□□□□□ -0.31
SNCA-203ENST00000394986 MRPL18Q9H0U6 180 aaKnown RBP13.13□□□□□ -0.31
SNCA-203ENST00000394986 COX19Q49B96 90 aa13.13□□□□□ -0.31
SNCA-203ENST00000394986 Q8N8P6 123 aa13.13□□□□□ -0.31
SNCA-203ENST00000394986 CDC42SE2Q9NRR3 84 aa13.13□□□□□ -0.31
SNCA-203ENST00000394986 LRP1BQ9NZR2 4599 aa13.12□□□□□ -0.31
SNCA-203ENST00000394986 MT-ND6P03923 174 aa13.12□□□□□ -0.31
SNCA-203ENST00000394986 RAB5AP20339 215 aa13.12□□□□□ -0.31
SNCA-203ENST00000394986 FABP9Q0Z7S8 132 aa13.12□□□□□ -0.31
SNCA-203ENST00000394986 RNASE13Q5GAN3 156 aaKnown RBP13.12□□□□□ -0.31
SNCA-203ENST00000394986 DGAT2L7PQ6IED9 249 aa13.12□□□□□ -0.31
SNCA-203ENST00000394986 CBLN2Q8IUK8 224 aa13.12□□□□□ -0.31
SNCA-203ENST00000394986 PGPEP1Q9NXJ5 209 aa13.12□□□□□ -0.31
SNCA-203ENST00000394986 TRAV8-4A0A0B4J246 113 aa13.11□□□□□ -0.31
SNCA-203ENST00000394986 IFI27P40305 119 aaPredicted RBP13.11□□□□□ -0.31
SNCA-203ENST00000394986 Q6ZUT4 128 aa13.11□□□□□ -0.31
SNCA-203ENST00000394986 ZNF664Q8N3J9 261 aa13.11□□□□□ -0.31
SNCA-203ENST00000394986 YPEL4Q96NS1 127 aa13.11□□□□□ -0.31
SNCA-203ENST00000394986 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.1□□□□□ -0.31
SNCA-203ENST00000394986 TMEM18Q96B42 140 aa13.1□□□□□ -0.31
SNCA-203ENST00000394986 ALKBH7Q9BT30 221 aaPredicted RBP13.1□□□□□ -0.31
SNCA-203ENST00000394986 GAGE12HA6NDE8 117 aa13.08□□□□□ -0.32
SNCA-203ENST00000394986 USP17L23D6RBM5 183 aa13.08□□□□□ -0.32
SNCA-203ENST00000394986 CDPF1Q6NVV7 123 aa13.08□□□□□ -0.32
SNCA-203ENST00000394986 CHCHD10Q8WYQ3 142 aaPredicted RBP13.08□□□□□ -0.32
SNCA-203ENST00000394986 OPRPNQ99935 248 aaPredicted RBP13.08□□□□□ -0.32
SNCA-203ENST00000394986 TIMM21Q9BVV7 248 aa13.08□□□□□ -0.32
SNCA-203ENST00000394986 CSDC2Q9Y534 153 aaKnown RBP13.08□□□□□ -0.32
SNCA-203ENST00000394986 TRAPPC1Q9Y5R8 145 aa13.08□□□□□ -0.32
SNCA-203ENST00000394986 IGLV5-52A0A0A0MRZ9 124 aa13.07□□□□□ -0.32
SNCA-203ENST00000394986 LINC00959A0A1B0GUT2 108 aa13.07□□□□□ -0.32
SNCA-203ENST00000394986 SMAGPQ0VAQ4 97 aa13.06□□□□□ -0.32
SNCA-203ENST00000394986 NTN5Q8WTR8 489 aaPredicted RBP13.06□□□□□ -0.32
SNCA-203ENST00000394986 FAM104AQ969W3 186 aa13.06□□□□□ -0.32
SNCA-203ENST00000394986 NXT2Q9NPJ8 142 aaKnown RBP13.06□□□□□ -0.32
SNCA-203ENST00000394986 SMCO4Q9NRQ5 59 aa13.06□□□□□ -0.32
SNCA-203ENST00000394986 KIAA1109Q2LD37 5005 aa13.06□□□□□ -0.32
SNCA-203ENST00000394986 SPANXA1Q9NS26 97 aa13.05□□□□□ -0.32
SNCA-203ENST00000394986 CCL25O15444 150 aa13.05□□□□□ -0.32
SNCA-203ENST00000394986 XCL1P47992 114 aa13.05□□□□□ -0.32
SNCA-203ENST00000394986 KRTAP10-1P60331 282 aa13.04□□□□□ -0.32
SNCA-203ENST00000394986 ORMDL2Q53FV1 153 aa13.04□□□□□ -0.32
SNCA-203ENST00000394986 PRSS3P2Q8NHM4 247 aa13.04□□□□□ -0.32
SNCA-203ENST00000394986 TRAV13-1A0A0B4J241 112 aa13.03□□□□□ -0.32
SNCA-203ENST00000394986 C2orf66Q6UXQ4 117 aa13.03□□□□□ -0.32
SNCA-203ENST00000394986 PRSS1P07477 247 aa13.02□□□□□ -0.33
SNCA-203ENST00000394986 GCSHP23434 173 aa13.02□□□□□ -0.33
SNCA-203ENST00000394986 FOXI1Q12951 378 aa13.02□□□□□ -0.33
SNCA-203ENST00000394986 SS18Q15532 418 aa13.02□□□□□ -0.33
SNCA-203ENST00000394986 CYSLTR1Q9Y271 337 aa13.02□□□□□ -0.33
SNCA-203ENST00000394986 K7EMI3 77 aa13.01□□□□□ -0.33
SNCA-203ENST00000394986 LINC01620Q4KN68 170 aa13.01□□□□□ -0.33
SNCA-203ENST00000394986 C14orf177Q52M58 125 aa13.01□□□□□ -0.33
SNCA-203ENST00000394986 IGLV4-3A0A075B6K6 122 aa13□□□□□ -0.33
SNCA-203ENST00000394986 MRPS36P82909 103 aaKnown RBP13□□□□□ -0.33
SNCA-203ENST00000394986 PYGO1Q9Y3Y4 419 aa13□□□□□ -0.33
SNCA-203ENST00000394986 C15orf56Q8N910 161 aa12.99□□□□□ -0.33
SNCA-203ENST00000394986 C18orf32Q8TCD1 76 aa12.99□□□□□ -0.33
SNCA-203ENST00000394986 APOBP04114 4563 aaKnown RBP12.99□□□□□ -0.33
SNCA-203ENST00000394986 FA2HQ7L5A8 372 aa12.98□□□□□ -0.33
SNCA-203ENST00000394986 hDV102S1A0JD36 115 aa12.97□□□□□ -0.33
SNCA-203ENST00000394986 IFITM10A6NMD0 228 aa12.97□□□□□ -0.33
SNCA-203ENST00000394986 C1orf196B1AJZ1 125 aa12.97□□□□□ -0.33
SNCA-203ENST00000394986 ZC2HC1BQ5TFG8 222 aa12.97□□□□□ -0.33
SNCA-203ENST00000394986 LINC01546A6NGU7 62 aa12.96□□□□□ -0.33
SNCA-203ENST00000394986 HIGD2BQ4VC39 106 aa12.96□□□□□ -0.33
SNCA-203ENST00000394986 CD164L2Q6UWJ8 174 aa12.96□□□□□ -0.33
SNCA-203ENST00000394986 URB1-AS1Q96HZ7 61 aa12.96□□□□□ -0.33
SNCA-203ENST00000394986 IGIPA6NJ69 53 aa12.96□□□□□ -0.34
SNCA-203ENST00000394986 SCO1O75880 301 aa12.96□□□□□ -0.34
SNCA-203ENST00000394986 TOMM6Q96B49 74 aa12.96□□□□□ -0.34
SNCA-203ENST00000394986 TMEM141Q96I45 108 aa12.96□□□□□ -0.34
SNCA-203ENST00000394986 RYR1P21817 5038 aa12.93□□□□□ -0.34
SNCA-203ENST00000394986 HERC2O95714 4834 aa12.93□□□□□ -0.34
SNCA-203ENST00000394986 HSPG2P98160 4391 aa12.93□□□□□ -0.34
SNCA-203ENST00000394986 CDK2AP2O75956 126 aa12.93□□□□□ -0.34
SNCA-203ENST00000394986 SLPIP03973 132 aa12.93□□□□□ -0.34
SNCA-203ENST00000394986 HAMPP81172 84 aa12.93□□□□□ -0.34
SNCA-203ENST00000394986 CFAP161Q6P656 301 aa12.93□□□□□ -0.34
SNCA-203ENST00000394986 LINC00173Q6ZV60 143 aa12.93□□□□□ -0.34
SNCA-203ENST00000394986 COLCA2A8K830 154 aa12.92□□□□□ -0.34
SNCA-203ENST00000394986 TEX43Q6ZNM6 134 aa12.92□□□□□ -0.34
SNCA-203ENST00000394986 C5orf38Q86SI9 138 aa12.92□□□□□ -0.34
SNCA-203ENST00000394986 AP5S1Q9NUS5 200 aa12.92□□□□□ -0.34
SNCA-203ENST00000394986 COX7A2LO14548 114 aa12.91□□□□□ -0.34
SNCA-203ENST00000394986 TRGC2P03986 189 aa12.91□□□□□ -0.34
SNCA-203ENST00000394986 G0S2P27469 103 aa12.91□□□□□ -0.34
SNCA-203ENST00000394986 Q6ZN92 141 aa12.91□□□□□ -0.34
SNCA-203ENST00000394986 LINC00526Q96FQ7 95 aa12.91□□□□□ -0.34
SNCA-203ENST00000394986 SCGB3A1Q96QR1 104 aa12.91□□□□□ -0.34
SNCA-203ENST00000394986 FAM30AQ9NZY2 134 aa12.91□□□□□ -0.34
SNCA-203ENST00000394986 GVQW2A0A096LPI5 108 aaPredicted RBP12.9□□□□□ -0.34
SNCA-203ENST00000394986 LINC00614P0C842 121 aa12.9□□□□□ -0.34
SNCA-203ENST00000394986 AMELXQ99217 191 aa12.9□□□□□ -0.34
SNCA-203ENST00000394986 TIMM17AQ99595 171 aa12.9□□□□□ -0.34
SNCA-203ENST00000394986 VCX2Q9H322 139 aa12.9□□□□□ -0.34
SNCA-203ENST00000394986 DNAH8Q96JB1 4490 aa12.9□□□□□ -0.34
SNCA-203ENST00000394986 A0A096LNJ9 63 aa12.89□□□□□ -0.35
SNCA-203ENST00000394986 IGHV1-58A0A0C4DH39 117 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms