RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 Q6ZSN1 163 aa7.25□□□□□ -1.25
UBE2D3-208ENST00000394803 STHQ8IWL8 128 aa7.25□□□□□ -1.25
UBE2D3-208ENST00000394803 ZNF843Q8N446 348 aa7.25□□□□□ -1.25
UBE2D3-208ENST00000394803 OVOL2Q9BRP0 275 aa7.25□□□□□ -1.25
UBE2D3-208ENST00000394803 Q9H8V8 135 aa7.25□□□□□ -1.25
UBE2D3-208ENST00000394803 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.25□□□□□ -1.253e-7■■■■□ 19.8
UBE2D3-208ENST00000394803 TRAV4A0A0B4J268 109 aa7.25□□□□□ -1.25
UBE2D3-208ENST00000394803 GAGE12JA6NER3 117 aa7.25□□□□□ -1.25
UBE2D3-208ENST00000394803 K7EQD1 137 aa7.25□□□□□ -1.25
UBE2D3-208ENST00000394803 GAGE7O76087 117 aa7.25□□□□□ -1.25
UBE2D3-208ENST00000394803 TRACP01848 142 aa7.25□□□□□ -1.25
UBE2D3-208ENST00000394803 GAGE12FP0CL80 117 aa7.25□□□□□ -1.25
UBE2D3-208ENST00000394803 GAGE12GP0CL81 117 aa7.25□□□□□ -1.25
UBE2D3-208ENST00000394803 GAGE12IP0CL82 117 aa7.25□□□□□ -1.25
UBE2D3-208ENST00000394803 GAGE4Q13068 117 aa7.25□□□□□ -1.25
UBE2D3-208ENST00000394803 DEFB114Q30KQ6 69 aa7.25□□□□□ -1.25
UBE2D3-208ENST00000394803 DOPEY2Q9Y3R5 2298 aa7.25□□□□□ -1.25
UBE2D3-208ENST00000394803 IGHV3-38A0A0C4DH36 116 aa7.24□□□□□ -1.25
UBE2D3-208ENST00000394803 NPC2P61916 151 aa7.24□□□□□ -1.25
UBE2D3-208ENST00000394803 MEIG1Q5JSS6 88 aa7.24□□□□□ -1.25
UBE2D3-208ENST00000394803 TMEM86BQ8N661 226 aa7.24□□□□□ -1.25
UBE2D3-208ENST00000394803 CLEC2BQ92478 149 aa7.24□□□□□ -1.25
UBE2D3-208ENST00000394803 IMUPQ9GZP8 106 aa7.24□□□□□ -1.25
UBE2D3-208ENST00000394803 SPTAN1Q13813 2472 aaKnown RBP7.24□□□□□ -1.25
UBE2D3-208ENST00000394803 IGHV3OR16-12A0A075B7B8 117 aa7.24□□□□□ -1.25
UBE2D3-208ENST00000394803 LINC00242Q5T6M2 205 aa7.24□□□□□ -1.25
UBE2D3-208ENST00000394803 PRIMA1Q86XR5 153 aa7.24□□□□□ -1.25
UBE2D3-208ENST00000394803 IL17DQ8TAD2 202 aa7.24□□□□□ -1.25
UBE2D3-208ENST00000394803 MYO18BQ8IUG5 2567 aa7.24□□□□□ -1.25
UBE2D3-208ENST00000394803 NACAE9PAV3 2078 aa7.23□□□□□ -1.25
UBE2D3-208ENST00000394803 UBE2L6O14933 153 aa7.23□□□□□ -1.25
UBE2D3-208ENST00000394803 IGHV4-31P0DP07 118 aa7.23□□□□□ -1.25
UBE2D3-208ENST00000394803 DEFB136Q30KP8 78 aa7.23□□□□□ -1.25
UBE2D3-208ENST00000394803 KHDC1LQ5JSQ8 128 aa7.23□□□□□ -1.25
UBE2D3-208ENST00000394803 FAM208BQ5VWN6 2430 aa7.23□□□□□ -1.25
UBE2D3-208ENST00000394803 TRGV1A0A0A0MS02 117 aa7.23□□□□□ -1.25
UBE2D3-208ENST00000394803 TRAV13-2A0A0B4J235 113 aa7.23□□□□□ -1.25
UBE2D3-208ENST00000394803 A8MZ25 164 aa7.23□□□□□ -1.25
UBE2D3-208ENST00000394803 SMIM1B2RUZ4 78 aa7.23□□□□□ -1.25
UBE2D3-208ENST00000394803 FAM222AQ5U5X8 452 aa7.23□□□□□ -1.25
UBE2D3-208ENST00000394803 CITED2Q99967 270 aaPredicted RBP7.23□□□□□ -1.25
UBE2D3-208ENST00000394803 CSMD1Q96PZ7 3565 aa7.22□□□□□ -1.25
UBE2D3-208ENST00000394803 TRBV7-7A0A0K0K1E9 115 aa7.22□□□□□ -1.25
UBE2D3-208ENST00000394803 INAFM2P0DMQ5 153 aa7.22□□□□□ -1.25
UBE2D3-208ENST00000394803 SHISA2Q6UWI4 295 aa7.22□□□□□ -1.25
UBE2D3-208ENST00000394803 AKAP6Q13023 2319 aa7.22□□□□□ -1.25
UBE2D3-208ENST00000394803 CRLF1O75462 422 aa7.21□□□□□ -1.25
UBE2D3-208ENST00000394803 LRRC75A-AS1Q8N1F1 130 aa7.21□□□□□ -1.25
UBE2D3-208ENST00000394803 ZNF625Q96I27 306 aaPredicted RBP7.21□□□□□ -1.25
UBE2D3-208ENST00000394803 USP9XQ93008 2570 aaPredicted RBP7.21□□□□□ -1.26
UBE2D3-208ENST00000394803 COX6A2Q02221 97 aa7.21□□□□□ -1.26
UBE2D3-208ENST00000394803 TENM4Q6N022 2769 aa7.21□□□□□ -1.26
UBE2D3-208ENST00000394803 TMEM243Q9BU79 118 aa7.21□□□□□ -1.26
UBE2D3-208ENST00000394803 CDC42SE2Q9NRR3 84 aa7.21□□□□□ -1.26
UBE2D3-208ENST00000394803 NHLRC4P0CG21 123 aaPredicted RBP7.2□□□□□ -1.26
UBE2D3-208ENST00000394803 DAND5Q8N907 189 aa7.2□□□□□ -1.26
UBE2D3-208ENST00000394803 SVIPQ8NHG7 77 aa7.2□□□□□ -1.26
UBE2D3-208ENST00000394803 XCL2Q9UBD3 114 aa7.2□□□□□ -1.26
UBE2D3-208ENST00000394803 Q9UF83 564 aa7.2□□□□□ -1.26
UBE2D3-208ENST00000394803 UBR5O95071 2799 aaPredicted RBP7.2□□□□□ -1.26
UBE2D3-208ENST00000394803 TRAV13-1A0A0B4J241 112 aa7.19□□□□□ -1.26
UBE2D3-208ENST00000394803 CRPP02741 224 aa7.19□□□□□ -1.26
UBE2D3-208ENST00000394803 ATP5G1P05496 136 aa7.19□□□□□ -1.26
UBE2D3-208ENST00000394803 HIST2H2BCQ6DN03 193 aa7.19□□□□□ -1.26
UBE2D3-208ENST00000394803 HIST2H2BDQ6DRA6 164 aa7.19□□□□□ -1.26
UBE2D3-208ENST00000394803 Q6ZSV7 163 aa7.19□□□□□ -1.26
UBE2D3-208ENST00000394803 C18orf65Q6ZTR6 163 aa7.19□□□□□ -1.26
UBE2D3-208ENST00000394803 C16orf74Q96GX8 76 aa7.19□□□□□ -1.26
UBE2D3-208ENST00000394803 B5MCH6 92 aa7.19□□□□□ -1.26
UBE2D3-208ENST00000394803 ODF3L2Q3SX64 289 aa7.19□□□□□ -1.26
UBE2D3-208ENST00000394803 LINC00643Q86TS7 51 aa7.19□□□□□ -1.26
UBE2D3-208ENST00000394803 C1orf158Q8N1D5 194 aa7.19□□□□□ -1.26
UBE2D3-208ENST00000394803 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.19□□□□□ -1.26
UBE2D3-208ENST00000394803 CRYBG3Q68DQ2 2970 aa7.18□□□□□ -1.26
UBE2D3-208ENST00000394803 F5H768 121 aa7.18□□□□□ -1.26
UBE2D3-208ENST00000394803 PRM2P04554 102 aa7.18□□□□□ -1.26
UBE2D3-208ENST00000394803 TRBV6-4A0A1B0GX49 114 aa7.17□□□□□ -1.26
UBE2D3-208ENST00000394803 RPL28P46779 137 aaKnown RBP7.17□□□□□ -1.26
UBE2D3-208ENST00000394803 NRGNQ92686 78 aa7.17□□□□□ -1.26
UBE2D3-208ENST00000394803 BAALC-AS2P0C853 105 aa7.17□□□□□ -1.26
UBE2D3-208ENST00000394803 LINC00694P0DN24 101 aa7.17□□□□□ -1.26
UBE2D3-208ENST00000394803 COX7B2Q8TF08 81 aa7.17□□□□□ -1.26
UBE2D3-208ENST00000394803 FAM110AQ9BQ89 295 aa7.17□□□□□ -1.26
UBE2D3-208ENST00000394803 H0YGX0 51 aa7.16□□□□□ -1.26
UBE2D3-208ENST00000394803 NTM-AS1Q6ZSK4 140 aa7.16□□□□□ -1.26
UBE2D3-208ENST00000394803 LRRK2Q5S007 2527 aa7.16□□□□□ -1.26
UBE2D3-208ENST00000394803 DNAL4O96015 105 aa7.16□□□□□ -1.26
UBE2D3-208ENST00000394803 CXCL5P42830 114 aa7.16□□□□□ -1.26
UBE2D3-208ENST00000394803 DEFB113Q30KQ7 82 aa7.16□□□□□ -1.26
UBE2D3-208ENST00000394803 MAPK1IP1LQ8NDC0 245 aa7.16□□□□□ -1.26
UBE2D3-208ENST00000394803 ASH1LQ9NR48 2969 aaKnown RBP7.15□□□□□ -1.26
UBE2D3-208ENST00000394803 SOSTDC1Q6X4U4 206 aa7.15□□□□□ -1.26
UBE2D3-208ENST00000394803 Q6ZTI0 123 aa7.15□□□□□ -1.26
UBE2D3-208ENST00000394803 TMEM126AQ9H061 195 aa7.15□□□□□ -1.26
UBE2D3-208ENST00000394803 SS18L2Q9UHA2 77 aa7.15□□□□□ -1.26
UBE2D3-208ENST00000394803 CSMD2Q7Z408 3487 aa7.15□□□□□ -1.26
UBE2D3-208ENST00000394803 TRGV2A0A075B6R0 118 aa7.15□□□□□ -1.27
UBE2D3-208ENST00000394803 A0A0U1RRA0 63 aa7.15□□□□□ -1.27
UBE2D3-208ENST00000394803 CCL24O00175 119 aa7.15□□□□□ -1.27
UBE2D3-208ENST00000394803 NBPF19A0A087WUL8 3843 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms