RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 TLN2Q9Y4G6 2542 aa11.06□□□□□ -0.64
VLDLR-202ENST00000382099 RBM3P98179 157 aaKnown RBP11.06□□□□□ -0.64
VLDLR-202ENST00000382099 FAM215AQ9Y5M1 114 aa11.06□□□□□ -0.64
VLDLR-202ENST00000382099 KIF25-AS1Q9Y6Z4 181 aa11.06□□□□□ -0.64
VLDLR-202ENST00000382099 CCL21O00585 134 aa11.05□□□□□ -0.64
VLDLR-202ENST00000382099 XCL1P47992 114 aa11.05□□□□□ -0.64
VLDLR-202ENST00000382099 RNF5Q99942 180 aa11.05□□□□□ -0.64
VLDLR-202ENST00000382099 XCL2Q9UBD3 114 aa11.05□□□□□ -0.64
VLDLR-202ENST00000382099 Q9H8V8 135 aa11.05□□□□□ -0.64
VLDLR-202ENST00000382099 IGHV3-73A0A0B4J1V6 119 aa11.04□□□□□ -0.64
VLDLR-202ENST00000382099 NCR3O14931 201 aa11.04□□□□□ -0.64
VLDLR-202ENST00000382099 IGFL2Q6UWQ7 119 aa11.04□□□□□ -0.64
VLDLR-202ENST00000382099 KLK9Q9UKQ9 250 aa11.04□□□□□ -0.64
VLDLR-202ENST00000382099 HRNRQ86YZ3 2850 aaPredicted RBP11.04□□□□□ -0.64
VLDLR-202ENST00000382099 C22orf24Q9Y442 160 aa11.04□□□□□ -0.64
VLDLR-202ENST00000382099 RPL28P46779 137 aaKnown RBP11.03□□□□□ -0.64
VLDLR-202ENST00000382099 CDSNQ15517 529 aa11.03□□□□□ -0.64
VLDLR-202ENST00000382099 DPM3Q9P2X0 92 aa11.03□□□□□ -0.64
VLDLR-202ENST00000382099 LINC00474Q9P2X8 69 aa11.03□□□□□ -0.64
VLDLR-202ENST00000382099 UBE2D4Q9Y2X8 147 aa11.03□□□□□ -0.64
VLDLR-202ENST00000382099 SNURFQ9Y675 71 aa11.03□□□□□ -0.64
VLDLR-202ENST00000382099 FAM19A1Q7Z5A9 133 aa11.03□□□□□ -0.64
VLDLR-202ENST00000382099 MRPL53Q96EL3 112 aaKnown RBP11.02□□□□□ -0.64
VLDLR-202ENST00000382099 SMIM26A0A096LP01 95 aa11.02□□□□□ -0.65
VLDLR-202ENST00000382099 NDUFC2-KCTD14E9PQ53 114 aa11.02□□□□□ -0.65
VLDLR-202ENST00000382099 SOCS3O14543 225 aa11.02□□□□□ -0.65
VLDLR-202ENST00000382099 IGKV3-20P01619 116 aa11.02□□□□□ -0.65
VLDLR-202ENST00000382099 ENHOQ6UWT2 76 aa11.02□□□□□ -0.65
VLDLR-202ENST00000382099 MYO18BQ8IUG5 2567 aa11.02□□□□□ -0.65
VLDLR-202ENST00000382099 BEAN1Q3B7T3 259 aa11.01□□□□□ -0.65
VLDLR-202ENST00000382099 MPLKIPQ8TAP9 179 aa11.01□□□□□ -0.65
VLDLR-202ENST00000382099 HIVEP3Q5T1R4 2406 aa11.01□□□□□ -0.65
VLDLR-202ENST00000382099 AVPP01185 164 aa11.01□□□□□ -0.65
VLDLR-202ENST00000382099 FAM222AQ5U5X8 452 aa11.01□□□□□ -0.65
VLDLR-202ENST00000382099 MRPS36P82909 103 aaKnown RBP11.01□□□□□ -0.65
VLDLR-202ENST00000382099 BSPH1Q075Z2 132 aa11□□□□□ -0.65
VLDLR-202ENST00000382099 IL17DQ8TAD2 202 aa11□□□□□ -0.65
VLDLR-202ENST00000382099 CDKN2A-AS1Q9UH64 79 aa11□□□□□ -0.65
VLDLR-202ENST00000382099 LENEPQ9Y5L5 61 aa11□□□□□ -0.65
VLDLR-202ENST00000382099 M0QY20 66 aa11□□□□□ -0.65
VLDLR-202ENST00000382099 PIK3CD-AS1Q5SR53 167 aa11□□□□□ -0.65
VLDLR-202ENST00000382099 GRNP28799 593 aaKnown RBP10.99□□□□□ -0.65
VLDLR-202ENST00000382099 MED14OSP0DP75 135 aa10.99□□□□□ -0.65
VLDLR-202ENST00000382099 HTN1P15515 57 aa10.99□□□□□ -0.65
VLDLR-202ENST00000382099 CELSR2Q9HCU4 2923 aa10.99□□□□□ -0.65
VLDLR-202ENST00000382099 SORL1Q92673 2214 aa10.99□□□□□ -0.65
VLDLR-202ENST00000382099 SLPIP03973 132 aa10.99□□□□□ -0.65
VLDLR-202ENST00000382099 SS18Q15532 418 aa10.99□□□□□ -0.65
VLDLR-202ENST00000382099 FP248Q71RG6 208 aaPredicted RBP10.99□□□□□ -0.65
VLDLR-202ENST00000382099 LINC01560Q8TB33 94 aa10.99□□□□□ -0.65
VLDLR-202ENST00000382099 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.98□□□□□ -0.65
VLDLR-202ENST00000382099 IGKV2-29A2NJV5 120 aaPredicted RBP10.98□□□□□ -0.65
VLDLR-202ENST00000382099 ACACBO00763 2458 aa10.98□□□□□ -0.65
VLDLR-202ENST00000382099 TRBV6-5A0A0K0K1A5 114 aa10.98□□□□□ -0.65
VLDLR-202ENST00000382099 SOSTDC1Q6X4U4 206 aa10.98□□□□□ -0.65
VLDLR-202ENST00000382099 G3V318 75 aa10.97□□□□□ -0.65
VLDLR-202ENST00000382099 FLNCQ14315 2725 aa10.97□□□□□ -0.65
VLDLR-202ENST00000382099 A0A087WYN8 130 aa10.97□□□□□ -0.65
VLDLR-202ENST00000382099 PSMB8P28062 276 aa10.97□□□□□ -0.65
VLDLR-202ENST00000382099 DGAT2L7PQ6IED9 249 aa10.97□□□□□ -0.65
VLDLR-202ENST00000382099 CRPP02741 224 aa10.97□□□□□ -0.65
VLDLR-202ENST00000382099 RNASE1P07998 156 aaKnown RBP10.97□□□□□ -0.65
VLDLR-202ENST00000382099 LINC00482Q8N8I6 264 aa10.96□□□□□ -0.65
VLDLR-202ENST00000382099 NPBQ8NG41 125 aa10.96□□□□□ -0.65
VLDLR-202ENST00000382099 RNASE6Q93091 150 aaKnown RBP10.96□□□□□ -0.65
VLDLR-202ENST00000382099 LECT2O14960 151 aa10.96□□□□□ -0.66
VLDLR-202ENST00000382099 TIMM17BO60830 172 aa10.96□□□□□ -0.66
VLDLR-202ENST00000382099 S100A7L2Q5SY68 101 aa10.96□□□□□ -0.66
VLDLR-202ENST00000382099 RMI2Q96E14 147 aa10.96□□□□□ -0.66
VLDLR-202ENST00000382099 F8WEM9 126 aa10.96□□□□□ -0.66
VLDLR-202ENST00000382099 CCDC140Q96MF4 163 aa10.96□□□□□ -0.66
VLDLR-202ENST00000382099 PTPN13Q12923 2485 aa10.95□□□□□ -0.66
VLDLR-202ENST00000382099 H7BZZ5 65 aa10.95□□□□□ -0.66
VLDLR-202ENST00000382099 HIST2H2BCQ6DN03 193 aa10.95□□□□□ -0.66
VLDLR-202ENST00000382099 HIST2H2BDQ6DRA6 164 aa10.95□□□□□ -0.66
VLDLR-202ENST00000382099 IGHV7-81A0A0B4J1V7 117 aa10.94□□□□□ -0.66
VLDLR-202ENST00000382099 NDUFA1O15239 70 aa10.94□□□□□ -0.66
VLDLR-202ENST00000382099 COPS9Q8WXC6 57 aa10.94□□□□□ -0.66
VLDLR-202ENST00000382099 KAAG1Q9UBP8 84 aa10.94□□□□□ -0.66
VLDLR-202ENST00000382099 C16orf95Q9H693 158 aa10.94□□□□□ -0.66
VLDLR-202ENST00000382099 ITLN2Q8WWU7 325 aaPredicted RBP10.94□□□□□ -0.66
VLDLR-202ENST00000382099 IGHV3-38A0A0C4DH36 116 aa10.93□□□□□ -0.66
VLDLR-202ENST00000382099 C2CD3Q4AC94 2353 aa10.93□□□□□ -0.66
VLDLR-202ENST00000382099 ATP6V0E1O15342 81 aa10.92□□□□□ -0.66
VLDLR-202ENST00000382099 USP9XQ93008 2570 aaPredicted RBP10.92□□□□□ -0.66
VLDLR-202ENST00000382099 TRBV7-6A0A0J9YX20 115 aa10.92□□□□□ -0.66
VLDLR-202ENST00000382099 LYPD5Q6UWN5 251 aa10.92□□□□□ -0.66
VLDLR-202ENST00000382099 ZANQ9Y493 2812 aa10.92□□□□□ -0.66
VLDLR-202ENST00000382099 ABCA12Q86UK0 2595 aa10.92□□□□□ -0.66
VLDLR-202ENST00000382099 PRB1P04280 392 aa10.91□□□□□ -0.66
VLDLR-202ENST00000382099 PROK1P58294 105 aa10.91□□□□□ -0.66
VLDLR-202ENST00000382099 SONP18583 2426 aaKnown RBP10.91□□□□□ -0.66
VLDLR-202ENST00000382099 RPL36AP83881 106 aaKnown RBP10.91□□□□□ -0.66
VLDLR-202ENST00000382099 RPL36ALQ969Q0 106 aaKnown RBP10.91□□□□□ -0.66
VLDLR-202ENST00000382099 MIR7-3HGQ8N6C7 128 aa10.9□□□□□ -0.66
VLDLR-202ENST00000382099 UNQ9165/PRO28630Q6UXU0 137 aa10.89□□□□□ -0.67
VLDLR-202ENST00000382099 FAM110DQ8TAY7 271 aaPredicted RBP10.89□□□□□ -0.67
VLDLR-202ENST00000382099 BPESC1Q9GZL8 116 aa10.89□□□□□ -0.67
VLDLR-202ENST00000382099 MYO9AB2RTY4 2548 aa10.89□□□□□ -0.67
VLDLR-202ENST00000382099 CCKP06307 115 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms