RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 I3L3M4 83 aa9.48□□□□□ -0.89
MSH5-204ENST00000375755 J3QLI3 93 aa9.48□□□□□ -0.89
MSH5-204ENST00000375755 COX6CP09669 75 aa9.48□□□□□ -0.89
MSH5-204ENST00000375755 TMEM126AQ9H061 195 aa9.48□□□□□ -0.89
MSH5-204ENST00000375755 KLLNB2CW77 178 aa9.48□□□□□ -0.89
MSH5-204ENST00000375755 TIMM21Q9BVV7 248 aa9.48□□□□□ -0.89
MSH5-204ENST00000375755 FAM236AA0A1B0GUQ0 79 aa9.47□□□□□ -0.89
MSH5-204ENST00000375755 FAM236BA0A1B0GV22 79 aa9.47□□□□□ -0.89
MSH5-204ENST00000375755 Q6YL49 198 aa9.47□□□□□ -0.89
MSH5-204ENST00000375755 CSDC2Q9Y534 153 aaKnown RBP9.47□□□□□ -0.89
MSH5-204ENST00000375755 TRAV12-3A0A0B4J271 114 aa9.47□□□□□ -0.89
MSH5-204ENST00000375755 CEMP1Q6PRD7 247 aaPredicted RBP9.47□□□□□ -0.89
MSH5-204ENST00000375755 LRRC75A-AS1Q8N1F1 130 aa9.47□□□□□ -0.89
MSH5-204ENST00000375755 SPANXDQ9BXN6 97 aa9.47□□□□□ -0.89
MSH5-204ENST00000375755 SPANXCQ9NY87 97 aa9.47□□□□□ -0.89
MSH5-204ENST00000375755 A8MZ25 164 aa9.46□□□□□ -0.89
MSH5-204ENST00000375755 PSMB8P28062 276 aa9.46□□□□□ -0.89
MSH5-204ENST00000375755 TMEM101Q96IK0 257 aa9.46□□□□□ -0.89
MSH5-204ENST00000375755 SORL1Q92673 2214 aa9.46□□□□□ -0.9
MSH5-204ENST00000375755 MIAQ16674 131 aa9.46□□□□□ -0.9
MSH5-204ENST00000375755 C18orf65Q6ZTR6 163 aa9.46□□□□□ -0.9
MSH5-204ENST00000375755 FAM104AQ969W3 186 aa9.46□□□□□ -0.9
MSH5-204ENST00000375755 NDUFA12Q9UI09 145 aa9.46□□□□□ -0.9
MSH5-204ENST00000375755 USMG5Q96IX5 58 aa9.45□□□□□ -0.9
MSH5-204ENST00000375755 ZNF702PQ9H963 129 aa9.45□□□□□ -0.9
MSH5-204ENST00000375755 NDUFA4O00483 81 aa9.45□□□□□ -0.9
MSH5-204ENST00000375755 TMEM61Q8N0U2 210 aa9.45□□□□□ -0.9
MSH5-204ENST00000375755 C9orf153Q5TBE3 101 aa9.45□□□□□ -0.9
MSH5-204ENST00000375755 C9orf85Q96MD7 179 aa9.45□□□□□ -0.9
MSH5-204ENST00000375755 IGHV3-16A0A0C4DH30 117 aa9.44□□□□□ -0.9
MSH5-204ENST00000375755 RNASE13Q5GAN3 156 aaKnown RBP9.44□□□□□ -0.9
MSH5-204ENST00000375755 SMCR5Q8TEV8 140 aa9.44□□□□□ -0.9
MSH5-204ENST00000375755 EDA2RQ9HAV5 297 aa9.44□□□□□ -0.9
MSH5-204ENST00000375755 NOTCH2Q04721 2471 aa9.43□□□□□ -0.9
MSH5-204ENST00000375755 IGHV1-58A0A0C4DH39 117 aa9.43□□□□□ -0.9
MSH5-204ENST00000375755 CD28P10747 220 aa9.43□□□□□ -0.9
MSH5-204ENST00000375755 MRPS36P82909 103 aaKnown RBP9.43□□□□□ -0.9
MSH5-204ENST00000375755 RHPN1-AS1Q9BWJ2 59 aa9.43□□□□□ -0.9
MSH5-204ENST00000375755 H3BUA1 57 aa9.43□□□□□ -0.9
MSH5-204ENST00000375755 DEFB136Q30KP8 78 aa9.42□□□□□ -0.9
MSH5-204ENST00000375755 DAND5Q8N907 189 aa9.42□□□□□ -0.9
MSH5-204ENST00000375755 OTOGQ6ZRI0 2925 aa9.42□□□□□ -0.9
MSH5-204ENST00000375755 TRAV12-2A0A075B6T6 113 aa9.41□□□□□ -0.9
MSH5-204ENST00000375755 VSIG2Q96IQ7 327 aa9.41□□□□□ -0.9
MSH5-204ENST00000375755 DCANP1Q8TF63 244 aa9.41□□□□□ -0.9
MSH5-204ENST00000375755 IMUPQ9GZP8 106 aa9.41□□□□□ -0.9
MSH5-204ENST00000375755 FAM19A5Q7Z5A7 132 aaPredicted RBP9.4□□□□□ -0.9
MSH5-204ENST00000375755 C3orf22Q8N5N4 141 aa9.4□□□□□ -0.9
MSH5-204ENST00000375755 IGKV3-20P01619 116 aa9.4□□□□□ -0.9
MSH5-204ENST00000375755 CITED2Q99967 270 aaPredicted RBP9.4□□□□□ -0.9
MSH5-204ENST00000375755 WNK1Q9H4A3 2382 aa9.4□□□□□ -0.9
MSH5-204ENST00000375755 RS1O15537 224 aa9.4□□□□□ -0.91
MSH5-204ENST00000375755 NDUFA7O95182 113 aa9.4□□□□□ -0.91
MSH5-204ENST00000375755 KRTAP1-1Q07627 177 aa9.4□□□□□ -0.91
MSH5-204ENST00000375755 PYGO1Q9Y3Y4 419 aa9.4□□□□□ -0.91
MSH5-204ENST00000375755 SYNJ2BPP57105 145 aa9.39□□□□□ -0.91
MSH5-204ENST00000375755 C5orf47Q569G3 176 aa9.39□□□□□ -0.91
MSH5-204ENST00000375755 DNAJC30Q96LL9 226 aa9.39□□□□□ -0.91
MSH5-204ENST00000375755 SMR3AQ99954 134 aa9.39□□□□□ -0.91
MSH5-204ENST00000375755 DAZ1Q9NQZ3 744 aaKnown RBP9.39□□□□□ -0.91
MSH5-204ENST00000375755 SMIM9A6NGZ8 99 aa9.39□□□□□ -0.91
MSH5-204ENST00000375755 ACYP1P07311 99 aa9.39□□□□□ -0.91
MSH5-204ENST00000375755 HERVK_113P63121 156 aa9.39□□□□□ -0.91
MSH5-204ENST00000375755 ESM1Q9NQ30 184 aa9.38□□□□□ -0.91
MSH5-204ENST00000375755 C11orf44Q8N8P7 122 aa9.38□□□□□ -0.91
MSH5-204ENST00000375755 LINC00643Q86TS7 51 aa9.37□□□□□ -0.91
MSH5-204ENST00000375755 IGHV3-73A0A0B4J1V6 119 aa9.37□□□□□ -0.91
MSH5-204ENST00000375755 TINCRA0A1B0GVN0 87 aa9.37□□□□□ -0.91
MSH5-204ENST00000375755 UQCRQO14949 82 aa9.37□□□□□ -0.91
MSH5-204ENST00000375755 PROK1P58294 105 aa9.37□□□□□ -0.91
MSH5-204ENST00000375755 SLURP1P55000 103 aa9.36□□□□□ -0.91
MSH5-204ENST00000375755 LINC00526Q96FQ7 95 aa9.36□□□□□ -0.91
MSH5-204ENST00000375755 IGHV1OR15-1A0A075B7D0 117 aa9.36□□□□□ -0.91
MSH5-204ENST00000375755 TIMM17BO60830 172 aa9.35□□□□□ -0.91
MSH5-204ENST00000375755 HOXD3P31249 432 aaPredicted RBP9.35□□□□□ -0.91
MSH5-204ENST00000375755 SETXQ7Z333 2677 aaKnown RBP9.35□□□□□ -0.91
MSH5-204ENST00000375755 DNAJC9-AS1A6NH13 148 aa9.35□□□□□ -0.91
MSH5-204ENST00000375755 DAZ2Q13117 558 aaKnown RBP9.35□□□□□ -0.91
MSH5-204ENST00000375755 KHDC1LQ5JSQ8 128 aa9.35□□□□□ -0.91
MSH5-204ENST00000375755 DAZ4Q86SG3 579 aaKnown RBP9.35□□□□□ -0.91
MSH5-204ENST00000375755 DAZ3Q9NR90 486 aaKnown RBP9.35□□□□□ -0.91
MSH5-204ENST00000375755 Q9UF83 564 aa9.35□□□□□ -0.91
MSH5-204ENST00000375755 COX7A2LO14548 114 aa9.35□□□□□ -0.91
MSH5-204ENST00000375755 SPINK13Q1W4C9 94 aa9.34□□□□□ -0.91
MSH5-204ENST00000375755 SDIM1Q6ZPB5 146 aa9.34□□□□□ -0.91
MSH5-204ENST00000375755 Q8N2B8 174 aa9.34□□□□□ -0.91
MSH5-204ENST00000375755 C22orf24Q9Y442 160 aa9.34□□□□□ -0.91
MSH5-204ENST00000375755 LINC00308Q8TCZ7 52 aa9.33□□□□□ -0.92
MSH5-204ENST00000375755 CDKN2A-AS1Q9UH64 79 aa9.33□□□□□ -0.92
MSH5-204ENST00000375755 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.33□□□□□ -0.92
MSH5-204ENST00000375755 A0A0U1RRA0 63 aa9.33□□□□□ -0.92
MSH5-204ENST00000375755 IGKV2-29A2NJV5 120 aaPredicted RBP9.33□□□□□ -0.92
MSH5-204ENST00000375755 C5orf38Q86SI9 138 aa9.33□□□□□ -0.92
MSH5-204ENST00000375755 NDUFA1O15239 70 aa9.33□□□□□ -0.92
MSH5-204ENST00000375755 BEAN1Q3B7T3 259 aa9.33□□□□□ -0.92
MSH5-204ENST00000375755 UBE2E2Q96LR5 201 aa9.33□□□□□ -0.92
MSH5-204ENST00000375755 CHCHD7Q9BUK0 85 aa9.33□□□□□ -0.92
MSH5-204ENST00000375755 UBE2D4Q9Y2X8 147 aa9.33□□□□□ -0.92
MSH5-204ENST00000375755 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.32□□□□□ -0.92
MSH5-204ENST00000375755 K7EMT4 169 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms