RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 POM121L12Q8N7R1 296 aa11.85□□□□□ -0.51
CLSTN1-201ENST00000361311 ANGP03950 147 aaKnown RBP11.85□□□□□ -0.51
CLSTN1-201ENST00000361311 FBXL19-AS1Q494R0 122 aa11.85□□□□□ -0.51
CLSTN1-201ENST00000361311 SERP2Q8N6R1 65 aa11.85□□□□□ -0.51
CLSTN1-201ENST00000361311 RPL18AQ02543 176 aaKnown RBP11.85□□□□□ -0.51
CLSTN1-201ENST00000361311 Q6ZSV7 163 aa11.85□□□□□ -0.51
CLSTN1-201ENST00000361311 LMO4P61968 165 aa11.84□□□□□ -0.51
CLSTN1-201ENST00000361311 MRPS36P82909 103 aaKnown RBP11.84□□□□□ -0.51
CLSTN1-201ENST00000361311 VPREB3Q9UKI3 123 aa11.83□□□□□ -0.51
CLSTN1-201ENST00000361311 TMEM256-PLSCR3K7ERE1 68 aa11.83□□□□□ -0.52
CLSTN1-201ENST00000361311 ADORA2A-AS1P86434 159 aa11.83□□□□□ -0.52
CLSTN1-201ENST00000361311 COL4A2P08572 1712 aa11.83□□□□□ -0.52
CLSTN1-201ENST00000361311 USP17L23D6RBM5 183 aa11.83□□□□□ -0.52
CLSTN1-201ENST00000361311 LRRC75A-AS1Q8N1F1 130 aa11.83□□□□□ -0.52
CLSTN1-201ENST00000361311 SHISA2Q6UWI4 295 aa11.82□□□□□ -0.52
CLSTN1-201ENST00000361311 A6NDX4 124 aa11.82□□□□□ -0.52
CLSTN1-201ENST00000361311 SLPIP03973 132 aa11.82□□□□□ -0.52
CLSTN1-201ENST00000361311 ZNF580Q9UK33 172 aa11.82□□□□□ -0.52
CLSTN1-201ENST00000361311 TRBV10-1A0A0K0K1A3 114 aa11.82□□□□□ -0.52
CLSTN1-201ENST00000361311 NCR3O14931 201 aa11.82□□□□□ -0.52
CLSTN1-201ENST00000361311 C9orf85Q96MD7 179 aa11.82□□□□□ -0.52
CLSTN1-201ENST00000361311 ZNF462Q96JM2 2506 aa11.82□□□□□ -0.52
CLSTN1-201ENST00000361311 JMJD1CQ15652 2540 aa11.81□□□□□ -0.52
CLSTN1-201ENST00000361311 CXCL5P42830 114 aa11.81□□□□□ -0.52
CLSTN1-201ENST00000361311 Q96MF0 132 aa11.8□□□□□ -0.52
CLSTN1-201ENST00000361311 UPK3BQ9BT76 320 aa11.8□□□□□ -0.52
CLSTN1-201ENST00000361311 IGHV4-30-2A0A087WSY4 118 aa11.8□□□□□ -0.52
CLSTN1-201ENST00000361311 LINC00526Q96FQ7 95 aa11.8□□□□□ -0.52
CLSTN1-201ENST00000361311 TLN2Q9Y4G6 2542 aa11.8□□□□□ -0.52
CLSTN1-201ENST00000361311 ZNF561-AS1K7EIQ3 104 aa11.79□□□□□ -0.52
CLSTN1-201ENST00000361311 ADAMTSL4-AS1Q5T5F5 129 aa11.79□□□□□ -0.52
CLSTN1-201ENST00000361311 FAM236DA0A1B0GTK5 79 aa11.79□□□□□ -0.52
CLSTN1-201ENST00000361311 FAM236CP0DP71 79 aa11.79□□□□□ -0.52
CLSTN1-201ENST00000361311 UBE2D4Q9Y2X8 147 aa11.79□□□□□ -0.52
CLSTN1-201ENST00000361311 EPG5Q9HCE0 2579 aa11.78□□□□□ -0.52
CLSTN1-201ENST00000361311 IGLV10-54A0A075B6I4 117 aa11.78□□□□□ -0.52
CLSTN1-201ENST00000361311 J3QLI3 93 aa11.78□□□□□ -0.52
CLSTN1-201ENST00000361311 ENHOQ6UWT2 76 aa11.78□□□□□ -0.52
CLSTN1-201ENST00000361311 C5orf42Q9H799 3197 aa11.78□□□□□ -0.52
CLSTN1-201ENST00000361311 RAI1Q7Z5J4 1906 aaPredicted RBP11.77□□□□□ -0.53
CLSTN1-201ENST00000361311 SMIM9A6NGZ8 99 aa11.76□□□□□ -0.53
CLSTN1-201ENST00000361311 F5H768 121 aa11.76□□□□□ -0.53
CLSTN1-201ENST00000361311 TMEM89A2RUT3 159 aa11.76□□□□□ -0.53
CLSTN1-201ENST00000361311 ATP5EP2Q5VTU8 51 aa11.76□□□□□ -0.53
CLSTN1-201ENST00000361311 C10orf105Q8TEF2 133 aa11.76□□□□□ -0.53
CLSTN1-201ENST00000361311 FAM222AQ5U5X8 452 aa11.75□□□□□ -0.53
CLSTN1-201ENST00000361311 KLK5Q9Y337 293 aaPredicted RBP11.75□□□□□ -0.53
CLSTN1-201ENST00000361311 GYPEP15421 78 aa11.75□□□□□ -0.53
CLSTN1-201ENST00000361311 C16orf74Q96GX8 76 aa11.75□□□□□ -0.53
CLSTN1-201ENST00000361311 Q6ZTI0 123 aa11.75□□□□□ -0.53
CLSTN1-201ENST00000361311 NDUFC2O95298 119 aa11.74□□□□□ -0.53
CLSTN1-201ENST00000361311 DAD1P61803 113 aa11.74□□□□□ -0.53
CLSTN1-201ENST00000361311 PPDPFQ9H3Y8 114 aa11.74□□□□□ -0.53
CLSTN1-201ENST00000361311 DCANP1Q8TF63 244 aa11.74□□□□□ -0.53
CLSTN1-201ENST00000361311 MAP6D1Q9H9H5 199 aa11.74□□□□□ -0.53
CLSTN1-201ENST00000361311 SBSPONQ8IVN8 264 aa11.73□□□□□ -0.53
CLSTN1-201ENST00000361311 BRK1Q8WUW1 75 aa11.73□□□□□ -0.53
CLSTN1-201ENST00000361311 SETD2Q9BYW2 2564 aaPredicted RBP11.73□□□□□ -0.53
CLSTN1-201ENST00000361311 IBA57-AS1B1ANH7 110 aa11.73□□□□□ -0.53
CLSTN1-201ENST00000361311 F8WEM9 126 aa11.72□□□□□ -0.53
CLSTN1-201ENST00000361311 FAM19A5Q7Z5A7 132 aaPredicted RBP11.72□□□□□ -0.53
CLSTN1-201ENST00000361311 USP9XQ93008 2570 aaPredicted RBP11.72□□□□□ -0.53
CLSTN1-201ENST00000361311 LRRK2Q5S007 2527 aa11.72□□□□□ -0.53
CLSTN1-201ENST00000361311 PRM2P04554 102 aa11.72□□□□□ -0.53
CLSTN1-201ENST00000361311 TRBV7-7A0A0K0K1E9 115 aa11.71□□□□□ -0.53
CLSTN1-201ENST00000361311 LOC107984640A0A0U1RRK4 108 aa11.71□□□□□ -0.53
CLSTN1-201ENST00000361311 CHD7Q9P2D1 2997 aa11.71□□□□□ -0.53
CLSTN1-201ENST00000361311 USP9YO00507 2555 aaPredicted RBP11.71□□□□□ -0.53
CLSTN1-201ENST00000361311 Q6JHZ5 121 aa11.71□□□□□ -0.53
CLSTN1-201ENST00000361311 SMIM11BQ8TCY0 68 aa11.71□□□□□ -0.53
CLSTN1-201ENST00000361311 CCL24O00175 119 aa11.71□□□□□ -0.54
CLSTN1-201ENST00000361311 C11orf71Q6IPW1 123 aa11.7□□□□□ -0.54
CLSTN1-201ENST00000361311 NREPQ16612 68 aa11.7□□□□□ -0.54
CLSTN1-201ENST00000361311 NKAPP1Q8N9T2 125 aa11.7□□□□□ -0.54
CLSTN1-201ENST00000361311 AMELXQ99217 191 aa11.7□□□□□ -0.54
CLSTN1-201ENST00000361311 A0A087WVE0 104 aa11.7□□□□□ -0.54
CLSTN1-201ENST00000361311 PDE6GP18545 87 aa11.7□□□□□ -0.54
CLSTN1-201ENST00000361311 C10orf99Q6UWK7 81 aa11.69□□□□□ -0.54
CLSTN1-201ENST00000361311 KIF25-AS1Q9Y6Z4 181 aa11.69□□□□□ -0.54
CLSTN1-201ENST00000361311 LINC00242Q5T6M2 205 aa11.69□□□□□ -0.54
CLSTN1-201ENST00000361311 HRCT1Q6UXD1 115 aa11.69□□□□□ -0.54
CLSTN1-201ENST00000361311 DPH3Q96FX2 82 aa11.68□□□□□ -0.54
CLSTN1-201ENST00000361311 H3BQ85 93 aa11.67□□□□□ -0.54
CLSTN1-201ENST00000361311 DEFB105AQ8NG35 78 aa11.67□□□□□ -0.54
CLSTN1-201ENST00000361311 PRORYQ9H606 182 aa11.67□□□□□ -0.54
CLSTN1-201ENST00000361311 FHL3Q13643 280 aa11.66□□□□□ -0.54
CLSTN1-201ENST00000361311 PKIGQ9Y2B9 76 aa11.66□□□□□ -0.54
CLSTN1-201ENST00000361311 NRGNQ92686 78 aa11.66□□□□□ -0.54
CLSTN1-201ENST00000361311 CSDC2Q9Y534 153 aaKnown RBP11.66□□□□□ -0.54
CLSTN1-201ENST00000361311 EDN2P20800 178 aa11.66□□□□□ -0.54
CLSTN1-201ENST00000361311 WFDC9Q8NEX5 89 aa11.65□□□□□ -0.54
CLSTN1-201ENST00000361311 DIRC1Q969H9 104 aa11.65□□□□□ -0.54
CLSTN1-201ENST00000361311 ABCA12Q86UK0 2595 aa11.64□□□□□ -0.55
CLSTN1-201ENST00000361311 SMIM1B2RUZ4 78 aa11.64□□□□□ -0.55
CLSTN1-201ENST00000361311 SPAG11BQ08648 103 aa11.64□□□□□ -0.55
CLSTN1-201ENST00000361311 IGHV4-28A0A0C4DH34 117 aa11.64□□□□□ -0.55
CLSTN1-201ENST00000361311 FUSP35637 526 aaKnown RBP eCLIP11.64□□□□□ -0.55
CLSTN1-201ENST00000361311 C6orf99Q4VX62 202 aa11.64□□□□□ -0.55
CLSTN1-201ENST00000361311 CHCHD7Q9BUK0 85 aa11.64□□□□□ -0.55
CLSTN1-201ENST00000361311 RPL28P46779 137 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms