RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 SETXQ7Z333 2677 aaKnown RBP11.44□□□□□ -0.58
RTN3-205ENST00000356000 FAM74A4Q5TZK3 123 aa11.44□□□□□ -0.58
RTN3-205ENST00000356000 HIST2H2BCQ6DN03 193 aa11.44□□□□□ -0.58
RTN3-205ENST00000356000 HIST2H2BDQ6DRA6 164 aa11.44□□□□□ -0.58
RTN3-205ENST00000356000 FAM110DQ8TAY7 271 aaPredicted RBP11.44□□□□□ -0.58
RTN3-205ENST00000356000 KLKP1Q107X0 134 aa11.43□□□□□ -0.58
RTN3-205ENST00000356000 C15orf32Q32M92 178 aa11.43□□□□□ -0.58
RTN3-205ENST00000356000 HOXD3P31249 432 aaPredicted RBP11.43□□□□□ -0.58
RTN3-205ENST00000356000 KRTAP21-3Q3LHN1 58 aa11.43□□□□□ -0.58
RTN3-205ENST00000356000 S100A7L2Q5SY68 101 aa11.42□□□□□ -0.58
RTN3-205ENST00000356000 LINC00482Q8N8I6 264 aa11.42□□□□□ -0.58
RTN3-205ENST00000356000 LINC00474Q9P2X8 69 aa11.42□□□□□ -0.58
RTN3-205ENST00000356000 SOCS3O14543 225 aa11.42□□□□□ -0.58
RTN3-205ENST00000356000 BCE1O60756 84 aa11.41□□□□□ -0.58
RTN3-205ENST00000356000 FLNBO75369 2602 aaKnown RBP11.41□□□□□ -0.58
RTN3-205ENST00000356000 DEFB1P60022 68 aa11.4□□□□□ -0.58
RTN3-205ENST00000356000 RNASE13Q5GAN3 156 aaKnown RBP11.4□□□□□ -0.58
RTN3-205ENST00000356000 MGAQ8IWI9 3026 aa11.4□□□□□ -0.58
RTN3-205ENST00000356000 TRAV7A0A075B6U4 112 aa11.4□□□□□ -0.58
RTN3-205ENST00000356000 CCKP06307 115 aa11.4□□□□□ -0.58
RTN3-205ENST00000356000 FAM19A1Q7Z5A9 133 aa11.4□□□□□ -0.58
RTN3-205ENST00000356000 TRBV7-6A0A0J9YX20 115 aa11.39□□□□□ -0.59
RTN3-205ENST00000356000 TRBV10-3A0A0K0K1G6 114 aa11.39□□□□□ -0.59
RTN3-205ENST00000356000 C22orf34Q6ZV56 151 aa11.39□□□□□ -0.59
RTN3-205ENST00000356000 SEM1Q6ZVN7 128 aa11.39□□□□□ -0.59
RTN3-205ENST00000356000 WFDC9Q8NEX5 89 aa11.39□□□□□ -0.59
RTN3-205ENST00000356000 ZNF625Q96I27 306 aaPredicted RBP11.39□□□□□ -0.59
RTN3-205ENST00000356000 CCDC140Q96MF4 163 aa11.39□□□□□ -0.59
RTN3-205ENST00000356000 DPM3Q9P2X0 92 aa11.39□□□□□ -0.59
RTN3-205ENST00000356000 Q9H8V8 135 aa11.39□□□□□ -0.59
RTN3-205ENST00000356000 TLN1Q9Y490 2541 aaKnown RBP11.39□□□□□ -0.59
RTN3-205ENST00000356000 PF4P02776 101 aa11.39□□□□□ -0.59
RTN3-205ENST00000356000 KLK9Q2XQG4 91 aa11.39□□□□□ -0.59
RTN3-205ENST00000356000 CLEC19AQ6UXS0 136 aa11.39□□□□□ -0.59
RTN3-205ENST00000356000 KLK9Q9UKQ9 250 aa11.39□□□□□ -0.59
RTN3-205ENST00000356000 PTPN13Q12923 2485 aa11.38□□□□□ -0.59
RTN3-205ENST00000356000 WNK2Q9Y3S1 2297 aa11.38□□□□□ -0.59
RTN3-205ENST00000356000 A0A087WYN8 130 aa11.38□□□□□ -0.59
RTN3-205ENST00000356000 A0A0U1RRA0 63 aa11.38□□□□□ -0.59
RTN3-205ENST00000356000 CDKN2A-AS1Q9UH64 79 aa11.38□□□□□ -0.59
RTN3-205ENST00000356000 IGLV5-45A0A087WSX0 123 aa11.37□□□□□ -0.59
RTN3-205ENST00000356000 NCR3O14931 201 aa11.37□□□□□ -0.59
RTN3-205ENST00000356000 ENHOQ6UWT2 76 aa11.37□□□□□ -0.59
RTN3-205ENST00000356000 SPTA1P02549 2419 aa11.36□□□□□ -0.59
RTN3-205ENST00000356000 IGHV7-81A0A0B4J1V7 117 aa11.36□□□□□ -0.59
RTN3-205ENST00000356000 TRAV13-2A0A0B4J235 113 aa11.36□□□□□ -0.59
RTN3-205ENST00000356000 KLLNB2CW77 178 aa11.36□□□□□ -0.59
RTN3-205ENST00000356000 C6orf226Q5I0X4 101 aa11.36□□□□□ -0.59
RTN3-205ENST00000356000 F6UB75 175 aa11.35□□□□□ -0.59
RTN3-205ENST00000356000 RBM3P98179 157 aaKnown RBP11.35□□□□□ -0.59
RTN3-205ENST00000356000 IL17DQ8TAD2 202 aa11.35□□□□□ -0.59
RTN3-205ENST00000356000 IGLV5-39A0A0G2JS06 123 aa11.35□□□□□ -0.59
RTN3-205ENST00000356000 F8WEM9 126 aa11.35□□□□□ -0.59
RTN3-205ENST00000356000 LAMA5O15230 3695 aa11.34□□□□□ -0.59
RTN3-205ENST00000356000 ATP5EP56381 51 aaPredicted RBP11.34□□□□□ -0.59
RTN3-205ENST00000356000 CFHR3Q02985 330 aa11.34□□□□□ -0.59
RTN3-205ENST00000356000 SS18Q15532 418 aa11.34□□□□□ -0.59
RTN3-205ENST00000356000 Q8N6K4 173 aa11.34□□□□□ -0.59
RTN3-205ENST00000356000 MAST4O15021 2626 aa11.34□□□□□ -0.59
RTN3-205ENST00000356000 DOPEY2Q9Y3R5 2298 aa11.34□□□□□ -0.59
RTN3-205ENST00000356000 PRRC2CQ9Y520 2896 aaKnown RBP11.33□□□□□ -0.59
RTN3-205ENST00000356000 RMI2Q96E14 147 aa11.33□□□□□ -0.6
RTN3-205ENST00000356000 H0YGX0 51 aa11.33□□□□□ -0.6
RTN3-205ENST00000356000 SIRPDQ9H106 197 aa11.33□□□□□ -0.6
RTN3-205ENST00000356000 IGHV3-16A0A0C4DH30 117 aa11.32□□□□□ -0.6
RTN3-205ENST00000356000 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.32□□□□□ -0.6
RTN3-205ENST00000356000 SMG1Q96Q15 3661 aaKnown RBP11.32□□□□□ -0.6
RTN3-205ENST00000356000 ABCA4P78363 2273 aa11.32□□□□□ -0.6
RTN3-205ENST00000356000 CRPP02741 224 aa11.31□□□□□ -0.6
RTN3-205ENST00000356000 SNURFQ9Y675 71 aa11.31□□□□□ -0.6
RTN3-205ENST00000356000 BLCAPP62952 87 aa11.31□□□□□ -0.6
RTN3-205ENST00000356000 PIEZO2Q9H5I5 2752 aa11.31□□□□□ -0.6
RTN3-205ENST00000356000 CCL21O00585 134 aa11.3□□□□□ -0.6
RTN3-205ENST00000356000 NDUFC1O43677 76 aa11.3□□□□□ -0.6
RTN3-205ENST00000356000 PIK3CD-AS1Q5SR53 167 aa11.3□□□□□ -0.6
RTN3-205ENST00000356000 MIR7-3HGQ8N6C7 128 aa11.3□□□□□ -0.6
RTN3-205ENST00000356000 ATMQ13315 3056 aa11.3□□□□□ -0.6
RTN3-205ENST00000356000 HECTD1Q9ULT8 2610 aa11.3□□□□□ -0.6
RTN3-205ENST00000356000 PMAIP1Q13794 54 aa11.3□□□□□ -0.6
RTN3-205ENST00000356000 LINC00337Q8N6G1 96 aa11.3□□□□□ -0.6
RTN3-205ENST00000356000 IGKV2-29A2NJV5 120 aaPredicted RBP11.29□□□□□ -0.6
RTN3-205ENST00000356000 ECSCRQ19T08 205 aa11.29□□□□□ -0.6
RTN3-205ENST00000356000 SMIM11BQ8TCY0 68 aa11.29□□□□□ -0.6
RTN3-205ENST00000356000 CHCHD7Q9BUK0 85 aa11.29□□□□□ -0.6
RTN3-205ENST00000356000 LECT2O14960 151 aa11.28□□□□□ -0.6
RTN3-205ENST00000356000 BPESC1Q9GZL8 116 aa11.28□□□□□ -0.6
RTN3-205ENST00000356000 LOC400499M0QZD8 3231 aa11.28□□□□□ -0.6
RTN3-205ENST00000356000 ODF3BA8MYP8 253 aa11.28□□□□□ -0.6
RTN3-205ENST00000356000 COX6A2Q02221 97 aa11.27□□□□□ -0.6
RTN3-205ENST00000356000 Q8N9W7 124 aa11.27□□□□□ -0.61
RTN3-205ENST00000356000 POLEQ07864 2286 aa11.26□□□□□ -0.61
RTN3-205ENST00000356000 IGKV2-28A0A075B6P5 120 aa11.26□□□□□ -0.61
RTN3-205ENST00000356000 IGKV2D-28P01615 120 aa11.26□□□□□ -0.61
RTN3-205ENST00000356000 ORMDL1Q9P0S3 153 aa11.26□□□□□ -0.61
RTN3-205ENST00000356000 BSNQ9UPA5 3926 aa11.25□□□□□ -0.61
RTN3-205ENST00000356000 UBL5Q9BZL1 73 aa11.25□□□□□ -0.61
RTN3-205ENST00000356000 ATP6V0E1O15342 81 aa11.25□□□□□ -0.61
RTN3-205ENST00000356000 UNQ9165/PRO28630Q6UXU0 137 aa11.25□□□□□ -0.61
RTN3-205ENST00000356000 C1orf158Q8N1D5 194 aa11.25□□□□□ -0.61
RTN3-205ENST00000356000 USP9YO00507 2555 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms