RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 PKIGQ9Y2B9 76 aa11.84□□□□□ -0.51
PTPN11-201ENST00000351677 CCDC168Q8NDH2 2452 aa11.84□□□□□ -0.51
PTPN11-201ENST00000351677 TRBV6-8A0A0A6YYG3 113 aa11.84□□□□□ -0.51
PTPN11-201ENST00000351677 FAM110AQ9BQ89 295 aa11.84□□□□□ -0.51
PTPN11-201ENST00000351677 SMIM9A6NGZ8 99 aa11.83□□□□□ -0.52
PTPN11-201ENST00000351677 KLLNB2CW77 178 aa11.83□□□□□ -0.52
PTPN11-201ENST00000351677 TRIAP1O43715 76 aa11.83□□□□□ -0.52
PTPN11-201ENST00000351677 IGLV1-40P01703 118 aa11.83□□□□□ -0.52
PTPN11-201ENST00000351677 SLPIP03973 132 aa11.83□□□□□ -0.52
PTPN11-201ENST00000351677 TRBV6-5A0A0K0K1A5 114 aa11.82□□□□□ -0.52
PTPN11-201ENST00000351677 EDN2P20800 178 aa11.82□□□□□ -0.52
PTPN11-201ENST00000351677 UFSP1Q6NVU6 142 aa11.82□□□□□ -0.52
PTPN11-201ENST00000351677 SMIM20Q8N5G0 67 aa11.82□□□□□ -0.52
PTPN11-201ENST00000351677 IGKV2-24A0A0C4DH68 120 aa11.82□□□□□ -0.52
PTPN11-201ENST00000351677 DCANP1Q8TF63 244 aa11.82□□□□□ -0.52
PTPN11-201ENST00000351677 CENPFP49454 3210 aa11.82□□□□□ -0.52
PTPN11-201ENST00000351677 H7C423 109 aa11.82□□□□□ -0.52
PTPN11-201ENST00000351677 LINC00310P59036 64 aa11.82□□□□□ -0.52
PTPN11-201ENST00000351677 MT-ATP8P03928 68 aa11.81□□□□□ -0.52
PTPN11-201ENST00000351677 AVPP01185 164 aa11.81□□□□□ -0.52
PTPN11-201ENST00000351677 LOC100131303A0A0U1RQF7 123 aa11.8□□□□□ -0.52
PTPN11-201ENST00000351677 TRBV6-4A0A1B0GX49 114 aa11.8□□□□□ -0.52
PTPN11-201ENST00000351677 C2CD3Q4AC94 2353 aa11.8□□□□□ -0.52
PTPN11-201ENST00000351677 TMEM258P61165 79 aa11.8□□□□□ -0.52
PTPN11-201ENST00000351677 BBC3Q96PG8 261 aaPredicted RBP11.8□□□□□ -0.52
PTPN11-201ENST00000351677 CRYGDP07320 174 aa11.8□□□□□ -0.52
PTPN11-201ENST00000351677 LINC01006Q8NI28 216 aa11.79□□□□□ -0.52
PTPN11-201ENST00000351677 MRPS12O15235 138 aaKnown RBP11.79□□□□□ -0.52
PTPN11-201ENST00000351677 LINC00643Q86TS7 51 aa11.79□□□□□ -0.52
PTPN11-201ENST00000351677 PYGO1Q9Y3Y4 419 aa11.79□□□□□ -0.52
PTPN11-201ENST00000351677 CPAMD8Q8IZJ3 1885 aa11.79□□□□□ -0.52
PTPN11-201ENST00000351677 C9orf85Q96MD7 179 aa11.79□□□□□ -0.52
PTPN11-201ENST00000351677 DEFB131BA0A096LNP1 70 aa11.78□□□□□ -0.52
PTPN11-201ENST00000351677 NDUFB1O75438 58 aa11.78□□□□□ -0.52
PTPN11-201ENST00000351677 POLR2KP53803 58 aaKnown RBP11.78□□□□□ -0.52
PTPN11-201ENST00000351677 IBA57-AS1B1ANH7 110 aa11.78□□□□□ -0.52
PTPN11-201ENST00000351677 XAGE1AQ9HD64 81 aa11.78□□□□□ -0.52
PTPN11-201ENST00000351677 URB1-AS1Q96HZ7 61 aa11.77□□□□□ -0.53
PTPN11-201ENST00000351677 UBE2D4Q9Y2X8 147 aa11.76□□□□□ -0.53
PTPN11-201ENST00000351677 KLK5Q9Y337 293 aaPredicted RBP11.76□□□□□ -0.53
PTPN11-201ENST00000351677 TRAV23DV6A0A075B6W5 121 aa11.76□□□□□ -0.53
PTPN11-201ENST00000351677 MYO18BQ8IUG5 2567 aa11.76□□□□□ -0.53
PTPN11-201ENST00000351677 LY6G6DO95868 133 aa11.76□□□□□ -0.53
PTPN11-201ENST00000351677 TRBV30A0A0K0K1B3 111 aa11.76□□□□□ -0.53
PTPN11-201ENST00000351677 ABCA2Q9BZC7 2435 aa11.75□□□□□ -0.53
PTPN11-201ENST00000351677 SDIM1Q6ZPB5 146 aa11.75□□□□□ -0.53
PTPN11-201ENST00000351677 MP68P56378 58 aa11.75□□□□□ -0.53
PTPN11-201ENST00000351677 RBX1P62877 108 aa11.75□□□□□ -0.53
PTPN11-201ENST00000351677 CNFNQ9BYD5 112 aa11.75□□□□□ -0.53
PTPN11-201ENST00000351677 EML5Q05BV3 1969 aa11.75□□□□□ -0.53
PTPN11-201ENST00000351677 WFDC9Q8NEX5 89 aa11.74□□□□□ -0.53
PTPN11-201ENST00000351677 MIFP14174 115 aa11.74□□□□□ -0.53
PTPN11-201ENST00000351677 RNF183Q96D59 192 aa11.74□□□□□ -0.53
PTPN11-201ENST00000351677 LINC00526Q96FQ7 95 aa11.74□□□□□ -0.53
PTPN11-201ENST00000351677 HIGD2AQ9BW72 106 aa11.74□□□□□ -0.53
PTPN11-201ENST00000351677 UPK3BQ9BT76 320 aa11.73□□□□□ -0.53
PTPN11-201ENST00000351677 TLN1Q9Y490 2541 aaKnown RBP11.73□□□□□ -0.53
PTPN11-201ENST00000351677 PDE6GP18545 87 aa11.73□□□□□ -0.53
PTPN11-201ENST00000351677 PRRC2AP48634 2157 aaKnown RBP11.73□□□□□ -0.53
PTPN11-201ENST00000351677 C5orf47Q569G3 176 aa11.72□□□□□ -0.53
PTPN11-201ENST00000351677 A0A1W2PPR1 153 aa11.72□□□□□ -0.53
PTPN11-201ENST00000351677 NDUFV3P56181 108 aaKnown RBP11.71□□□□□ -0.53
PTPN11-201ENST00000351677 C6orf99Q4VX62 202 aa11.71□□□□□ -0.53
PTPN11-201ENST00000351677 SPATA25Q9BR10 227 aa11.71□□□□□ -0.54
PTPN11-201ENST00000351677 RAI1Q7Z5J4 1906 aaPredicted RBP11.7□□□□□ -0.54
PTPN11-201ENST00000351677 COL5A1P20908 1838 aaPredicted RBP11.7□□□□□ -0.54
PTPN11-201ENST00000351677 UBE2D1P51668 147 aa11.7□□□□□ -0.54
PTPN11-201ENST00000351677 SCXQ7RTU7 201 aa11.7□□□□□ -0.54
PTPN11-201ENST00000351677 H0Y9J4 135 aa11.7□□□□□ -0.54
PTPN11-201ENST00000351677 A0A096LNI7 61 aa11.69□□□□□ -0.54
PTPN11-201ENST00000351677 PIEZO1Q92508 2521 aa11.69□□□□□ -0.54
PTPN11-201ENST00000351677 BPY2O14599 106 aa11.69□□□□□ -0.54
PTPN11-201ENST00000351677 KRTAP10-9P60411 292 aa11.69□□□□□ -0.54
PTPN11-201ENST00000351677 HILS1P60008 231 aa11.69□□□□□ -0.54
PTPN11-201ENST00000351677 IGIPA6NJ69 53 aa11.68□□□□□ -0.54
PTPN11-201ENST00000351677 LINC00959A0A1B0GUT2 108 aa11.68□□□□□ -0.54
PTPN11-201ENST00000351677 TIMM17BO60830 172 aa11.68□□□□□ -0.54
PTPN11-201ENST00000351677 B9D2Q9BPU9 175 aa11.68□□□□□ -0.54
PTPN11-201ENST00000351677 J3KT08 172 aa11.68□□□□□ -0.54
PTPN11-201ENST00000351677 FAM19A5Q7Z5A7 132 aaPredicted RBP11.67□□□□□ -0.54
PTPN11-201ENST00000351677 POM121L12Q8N7R1 296 aa11.67□□□□□ -0.54
PTPN11-201ENST00000351677 MRPS36P82909 103 aaKnown RBP11.67□□□□□ -0.54
PTPN11-201ENST00000351677 CD164L2Q6UWJ8 174 aa11.67□□□□□ -0.54
PTPN11-201ENST00000351677 FAM19A1Q7Z5A9 133 aa11.67□□□□□ -0.54
PTPN11-201ENST00000351677 ENHOQ6UWT2 76 aa11.66□□□□□ -0.54
PTPN11-201ENST00000351677 NDUFA7O95182 113 aa11.66□□□□□ -0.54
PTPN11-201ENST00000351677 MYO9AB2RTY4 2548 aa11.66□□□□□ -0.54
PTPN11-201ENST00000351677 CLUHP3Q96NS8 147 aa11.66□□□□□ -0.54
PTPN11-201ENST00000351677 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.65□□□□□ -0.54
PTPN11-201ENST00000351677 ODF3L2Q3SX64 289 aa11.65□□□□□ -0.54
PTPN11-201ENST00000351677 C14orf177Q52M58 125 aa11.65□□□□□ -0.54
PTPN11-201ENST00000351677 SYCNQ0VAF6 134 aa11.65□□□□□ -0.54
PTPN11-201ENST00000351677 CHKB-CPT1BH3BT56 60 aa11.64□□□□□ -0.55
PTPN11-201ENST00000351677 UBE2D3P61077 147 aa11.64□□□□□ -0.55
PTPN11-201ENST00000351677 UBE2D2P62837 147 aa11.64□□□□□ -0.55
PTPN11-201ENST00000351677 SMR3AQ99954 134 aa11.64□□□□□ -0.55
PTPN11-201ENST00000351677 CRIP2P52943 208 aaPredicted RBP11.64□□□□□ -0.55
PTPN11-201ENST00000351677 KPRPQ5T749 579 aaPredicted RBP11.64□□□□□ -0.55
PTPN11-201ENST00000351677 EXPH5Q8NEV8 1989 aa11.64□□□□□ -0.55
PTPN11-201ENST00000351677 CDC42SE2Q9NRR3 84 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms