RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 PROK1P58294 105 aa11.34□□□□□ -0.59
LRP8-202ENST00000347547 TMEM258P61165 79 aa11.34□□□□□ -0.59
LRP8-202ENST00000347547 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.34□□□□□ -0.59
LRP8-202ENST00000347547 FAM218AQ96MZ4 157 aa11.34□□□□□ -0.59
LRP8-202ENST00000347547 MALP21145 153 aa11.33□□□□□ -0.6
LRP8-202ENST00000347547 FAM19A3Q7Z5A8 133 aa11.33□□□□□ -0.6
LRP8-202ENST00000347547 GNLYP22749 145 aa11.33□□□□□ -0.6
LRP8-202ENST00000347547 hADV29S1A0JD25 119 aa11.32□□□□□ -0.6
LRP8-202ENST00000347547 PF4P02776 101 aa11.32□□□□□ -0.6
LRP8-202ENST00000347547 OVOL2Q9BRP0 275 aa11.32□□□□□ -0.6
LRP8-202ENST00000347547 IGHV3-73A0A0B4J1V6 119 aa11.32□□□□□ -0.6
LRP8-202ENST00000347547 Q6JHZ5 121 aa11.32□□□□□ -0.6
LRP8-202ENST00000347547 RPL28P46779 137 aaKnown RBP11.31□□□□□ -0.6
LRP8-202ENST00000347547 CFHR3Q02985 330 aa11.31□□□□□ -0.6
LRP8-202ENST00000347547 PRIMA1Q86XR5 153 aa11.31□□□□□ -0.6
LRP8-202ENST00000347547 ZNF625Q96I27 306 aaPredicted RBP11.31□□□□□ -0.6
LRP8-202ENST00000347547 COX6A2Q02221 97 aa11.31□□□□□ -0.6
LRP8-202ENST00000347547 HIST2H2BCQ6DN03 193 aa11.31□□□□□ -0.6
LRP8-202ENST00000347547 HIST2H2BDQ6DRA6 164 aa11.31□□□□□ -0.6
LRP8-202ENST00000347547 SERP2Q8N6R1 65 aa11.3□□□□□ -0.6
LRP8-202ENST00000347547 UPK3BQ9BT76 320 aa11.3□□□□□ -0.6
LRP8-202ENST00000347547 A6NDX4 124 aa11.3□□□□□ -0.6
LRP8-202ENST00000347547 AKAP6Q13023 2319 aa11.29□□□□□ -0.6
LRP8-202ENST00000347547 IGHV3OR16-12A0A075B7B8 117 aa11.29□□□□□ -0.6
LRP8-202ENST00000347547 SMIM1B2RUZ4 78 aa11.29□□□□□ -0.6
LRP8-202ENST00000347547 LINC00242Q5T6M2 205 aa11.29□□□□□ -0.6
LRP8-202ENST00000347547 Q6ZSN1 163 aa11.29□□□□□ -0.6
LRP8-202ENST00000347547 DPH3Q96FX2 82 aa11.29□□□□□ -0.6
LRP8-202ENST00000347547 OBSCN-AS1Q96MR7 158 aa11.29□□□□□ -0.6
LRP8-202ENST00000347547 Q9UF83 564 aa11.29□□□□□ -0.6
LRP8-202ENST00000347547 TRAV13-2A0A0B4J235 113 aa11.28□□□□□ -0.6
LRP8-202ENST00000347547 RBMY1A1P0DJD3 496 aaKnown RBP11.28□□□□□ -0.6
LRP8-202ENST00000347547 RBMY1CP0DJD4 496 aa11.28□□□□□ -0.6
LRP8-202ENST00000347547 RBMY1FQ15415 496 aaKnown RBP11.28□□□□□ -0.6
LRP8-202ENST00000347547 FLNCQ14315 2725 aa11.28□□□□□ -0.6
LRP8-202ENST00000347547 C19orf84I3L1E1 186 aa11.28□□□□□ -0.6
LRP8-202ENST00000347547 BPESC1Q9GZL8 116 aa11.28□□□□□ -0.6
LRP8-202ENST00000347547 CYSTM1Q9H1C7 97 aa11.28□□□□□ -0.6
LRP8-202ENST00000347547 DNAL4O96015 105 aa11.27□□□□□ -0.6
LRP8-202ENST00000347547 IGHV3-53P01767 116 aa11.27□□□□□ -0.6
LRP8-202ENST00000347547 UBTD1Q9HAC8 227 aa11.27□□□□□ -0.6
LRP8-202ENST00000347547 CELSR1Q9NYQ6 3014 aa11.26□□□□□ -0.61
LRP8-202ENST00000347547 DGAT2L7PQ6IED9 249 aa11.26□□□□□ -0.61
LRP8-202ENST00000347547 A0A0U1RRA0 63 aa11.25□□□□□ -0.61
LRP8-202ENST00000347547 A8MTW9 85 aa11.25□□□□□ -0.61
LRP8-202ENST00000347547 BLCAPP62952 87 aa11.25□□□□□ -0.61
LRP8-202ENST00000347547 LY6EQ16553 131 aa11.25□□□□□ -0.61
LRP8-202ENST00000347547 Q9HAA7 133 aa11.25□□□□□ -0.61
LRP8-202ENST00000347547 TRAV13-1A0A0B4J241 112 aa11.25□□□□□ -0.61
LRP8-202ENST00000347547 KNCNA6PVL3 124 aa11.25□□□□□ -0.61
LRP8-202ENST00000347547 BRD3OSQ6XYD6 125 aa11.25□□□□□ -0.61
LRP8-202ENST00000347547 ZFYVE26Q68DK2 2539 aa11.24□□□□□ -0.61
LRP8-202ENST00000347547 USP9XQ93008 2570 aaPredicted RBP11.24□□□□□ -0.61
LRP8-202ENST00000347547 TRAV25A0A0B4J276 109 aa11.23□□□□□ -0.61
LRP8-202ENST00000347547 IGHV3-38A0A0C4DH36 116 aa11.23□□□□□ -0.61
LRP8-202ENST00000347547 F5H768 121 aa11.23□□□□□ -0.61
LRP8-202ENST00000347547 H3BUX3 64 aa11.23□□□□□ -0.61
LRP8-202ENST00000347547 CRPP02741 224 aa11.23□□□□□ -0.61
LRP8-202ENST00000347547 PSMB8P28062 276 aa11.23□□□□□ -0.61
LRP8-202ENST00000347547 DOPEY1Q5JWR5 2465 aa11.23□□□□□ -0.61
LRP8-202ENST00000347547 COL12A1Q99715 3063 aa11.22□□□□□ -0.61
LRP8-202ENST00000347547 BBC3Q96PG8 261 aaPredicted RBP11.22□□□□□ -0.61
LRP8-202ENST00000347547 LINC01561Q8N1V8 128 aa11.21□□□□□ -0.61
LRP8-202ENST00000347547 KIR2DL5BQ8NHK3 375 aa11.21□□□□□ -0.61
LRP8-202ENST00000347547 LINC00846Q9NV44 126 aa11.21□□□□□ -0.61
LRP8-202ENST00000347547 IGKV3D-7A0A0C4DH55 119 aa11.21□□□□□ -0.62
LRP8-202ENST00000347547 USP17L23D6RBM5 183 aa11.21□□□□□ -0.62
LRP8-202ENST00000347547 H0YGX0 51 aa11.21□□□□□ -0.62
LRP8-202ENST00000347547 C14orf132Q9NPU4 83 aa11.2□□□□□ -0.62
LRP8-202ENST00000347547 ABCA2Q9BZC7 2435 aa11.2□□□□□ -0.62
LRP8-202ENST00000347547 RS1O15537 224 aa11.2□□□□□ -0.62
LRP8-202ENST00000347547 HTN1P15515 57 aa11.2□□□□□ -0.62
LRP8-202ENST00000347547 LINC00337Q8N6G1 96 aa11.2□□□□□ -0.62
LRP8-202ENST00000347547 PIMREGQ9BSJ6 248 aa11.2□□□□□ -0.62
LRP8-202ENST00000347547 NACAE9PAV3 2078 aa11.2□□□□□ -0.62
LRP8-202ENST00000347547 TMEM89A2RUT3 159 aa11.19□□□□□ -0.62
LRP8-202ENST00000347547 OXTP01178 125 aa11.19□□□□□ -0.62
LRP8-202ENST00000347547 HOXD3P31249 432 aaPredicted RBP11.19□□□□□ -0.62
LRP8-202ENST00000347547 C9orf129Q5T035 196 aaKnown RBP11.19□□□□□ -0.62
LRP8-202ENST00000347547 UBR5O95071 2799 aaPredicted RBP11.19□□□□□ -0.62
LRP8-202ENST00000347547 IGKV2-28A0A075B6P5 120 aa11.19□□□□□ -0.62
LRP8-202ENST00000347547 A0A087WYN8 130 aa11.19□□□□□ -0.62
LRP8-202ENST00000347547 IGKV2D-28P01615 120 aa11.19□□□□□ -0.62
LRP8-202ENST00000347547 VPS13CQ709C8 3753 aa11.19□□□□□ -0.62
LRP8-202ENST00000347547 IGHV4-38-2P0DP08 117 aa11.18□□□□□ -0.62
LRP8-202ENST00000347547 C11orf72Q8NBR9 251 aa11.18□□□□□ -0.62
LRP8-202ENST00000347547 SPTAN1Q13813 2472 aaKnown RBP11.17□□□□□ -0.62
LRP8-202ENST00000347547 NDUFC2-KCTD14E9PQ53 114 aa11.17□□□□□ -0.62
LRP8-202ENST00000347547 SYNJ2BPP57105 145 aa11.17□□□□□ -0.62
LRP8-202ENST00000347547 SMIM11BQ8TCY0 68 aa11.17□□□□□ -0.62
LRP8-202ENST00000347547 DOPEY2Q9Y3R5 2298 aa11.17□□□□□ -0.62
LRP8-202ENST00000347547 EPG5Q9HCE0 2579 aa11.16□□□□□ -0.62
LRP8-202ENST00000347547 UTP20O75691 2785 aaKnown RBP11.16□□□□□ -0.62
LRP8-202ENST00000347547 A0A087WVE0 104 aa11.16□□□□□ -0.62
LRP8-202ENST00000347547 PRB1P04280 392 aa11.16□□□□□ -0.62
LRP8-202ENST00000347547 DSCR8Q96T75 97 aa11.16□□□□□ -0.62
LRP8-202ENST00000347547 SND1-IT1Q9HBX3 110 aa11.16□□□□□ -0.62
LRP8-202ENST00000347547 RBMY1BA6NDE4 496 aaKnown RBP11.16□□□□□ -0.62
LRP8-202ENST00000347547 RBMY1EA6NEQ0 496 aaKnown RBP11.16□□□□□ -0.62
LRP8-202ENST00000347547 RBMY1DP0C7P1 496 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms