RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 C5orf47Q569G3 176 aa6.76□□□□□ -1.33
C11orf54-201ENST00000331239 NOP10Q9NPE3 64 aaKnown RBP6.76□□□□□ -1.33
C11orf54-201ENST00000331239 TRBV6-5A0A0K0K1A5 114 aa6.75□□□□□ -1.33
C11orf54-201ENST00000331239 SDHAF1A6NFY7 115 aa6.75□□□□□ -1.33
C11orf54-201ENST00000331239 PRB2P02812 416 aaPredicted RBP6.75□□□□□ -1.33
C11orf54-201ENST00000331239 FAM74A4Q5TZK3 123 aa6.75□□□□□ -1.33
C11orf54-201ENST00000331239 MTURNQ8N3F0 131 aa6.75□□□□□ -1.33
C11orf54-201ENST00000331239 TRGV1A0A0A0MS02 117 aa6.75□□□□□ -1.33
C11orf54-201ENST00000331239 MEGF8Q7Z7M0 2845 aa6.75□□□□□ -1.33
C11orf54-201ENST00000331239 TRBV27A0A0K0K1C4 114 aa6.74□□□□□ -1.33
C11orf54-201ENST00000331239 IGIPA6NJ69 53 aa6.74□□□□□ -1.33
C11orf54-201ENST00000331239 TSHBP01222 138 aa6.74□□□□□ -1.33
C11orf54-201ENST00000331239 CRYGDP07320 174 aa6.74□□□□□ -1.33
C11orf54-201ENST00000331239 ZNF56Q15929 161 aa6.74□□□□□ -1.33
C11orf54-201ENST00000331239 PAPPA-AS1Q5QFB9 102 aa6.74□□□□□ -1.33
C11orf54-201ENST00000331239 CFAP126Q5VTH2 177 aa6.74□□□□□ -1.33
C11orf54-201ENST00000331239 TMEM141Q96I45 108 aa6.74□□□□□ -1.33
C11orf54-201ENST00000331239 TIMM17AQ99595 171 aa6.74□□□□□ -1.33
C11orf54-201ENST00000331239 IGLV4-69A0A075B6H9 119 aa6.74□□□□□ -1.33
C11orf54-201ENST00000331239 C11orf86A6NJI1 115 aa6.74□□□□□ -1.33
C11orf54-201ENST00000331239 ZNF815PA8K554 130 aa6.74□□□□□ -1.33
C11orf54-201ENST00000331239 H3BNG1 76 aa6.74□□□□□ -1.33
C11orf54-201ENST00000331239 HERVK_113P61574 105 aa6.74□□□□□ -1.33
C11orf54-201ENST00000331239 RPL39P62891 51 aaKnown RBP6.74□□□□□ -1.33
C11orf54-201ENST00000331239 PMVKQ15126 192 aa6.74□□□□□ -1.33
C11orf54-201ENST00000331239 C12orf74Q32Q52 190 aa6.74□□□□□ -1.33
C11orf54-201ENST00000331239 FAM222AQ5U5X8 452 aa6.74□□□□□ -1.33
C11orf54-201ENST00000331239 TRBV10-1A0A0K0K1A3 114 aa6.73□□□□□ -1.33
C11orf54-201ENST00000331239 IGLL5B9A064 214 aa6.73□□□□□ -1.33
C11orf54-201ENST00000331239 DAD1P61803 113 aa6.73□□□□□ -1.33
C11orf54-201ENST00000331239 DNAJC30Q96LL9 226 aa6.73□□□□□ -1.33
C11orf54-201ENST00000331239 SS18L2Q9UHA2 77 aa6.73□□□□□ -1.33
C11orf54-201ENST00000331239 TRBV6-4A0A1B0GX49 114 aa6.73□□□□□ -1.33
C11orf54-201ENST00000331239 M0QY20 66 aa6.73□□□□□ -1.33
C11orf54-201ENST00000331239 ATP5G1P05496 136 aa6.73□□□□□ -1.33
C11orf54-201ENST00000331239 Q6ZTI0 123 aa6.73□□□□□ -1.33
C11orf54-201ENST00000331239 TGP01266 2768 aa6.73□□□□□ -1.33
C11orf54-201ENST00000331239 TRGV2A0A075B6R0 118 aa6.72□□□□□ -1.33
C11orf54-201ENST00000331239 A0A1B0GWB2 263 aa6.72□□□□□ -1.33
C11orf54-201ENST00000331239 IGHV3-53P01767 116 aa6.72□□□□□ -1.33
C11orf54-201ENST00000331239 RHOHQ15669 191 aa6.72□□□□□ -1.33
C11orf54-201ENST00000331239 SCGB1D4Q6XE38 83 aa6.72□□□□□ -1.33
C11orf54-201ENST00000331239 DEFB104AQ8WTQ1 72 aa6.72□□□□□ -1.33
C11orf54-201ENST00000331239 MRPL16Q9NX20 251 aaKnown RBP6.72□□□□□ -1.33
C11orf54-201ENST00000331239 EMP1P54849 157 aa6.72□□□□□ -1.33
C11orf54-201ENST00000331239 SH2D6Q7Z4S9 175 aa6.72□□□□□ -1.33
C11orf54-201ENST00000331239 PRM2P04554 102 aa6.71□□□□□ -1.34
C11orf54-201ENST00000331239 C11orf45Q8TAV5 145 aa6.71□□□□□ -1.34
C11orf54-201ENST00000331239 GAGE7O76087 117 aa6.71□□□□□ -1.34
C11orf54-201ENST00000331239 GAGE12FP0CL80 117 aa6.71□□□□□ -1.34
C11orf54-201ENST00000331239 GAGE12GP0CL81 117 aa6.71□□□□□ -1.34
C11orf54-201ENST00000331239 GAGE12IP0CL82 117 aa6.71□□□□□ -1.34
C11orf54-201ENST00000331239 PLEKHB2Q96CS7 222 aa6.71□□□□□ -1.34
C11orf54-201ENST00000331239 RETNQ9HD89 108 aa6.71□□□□□ -1.34
C11orf54-201ENST00000331239 A0A0J9YWU9 116 aa6.7□□□□□ -1.34
C11orf54-201ENST00000331239 PRO0255Q9UI72 69 aa6.7□□□□□ -1.34
C11orf54-201ENST00000331239 FHL2Q14192 279 aa6.7□□□□□ -1.34
C11orf54-201ENST00000331239 NACAE9PAV3 2078 aa6.69□□□□□ -1.34
C11orf54-201ENST00000331239 TRAV10A0A0B4J240 114 aa6.69□□□□□ -1.34
C11orf54-201ENST00000331239 TMEM170BQ5T4T1 132 aa6.69□□□□□ -1.34
C11orf54-201ENST00000331239 SMIM20Q8N5G0 67 aa6.69□□□□□ -1.34
C11orf54-201ENST00000331239 SRSF9Q13242 221 aaKnown RBP eCLIP6.69□□□□□ -1.34
C11orf54-201ENST00000331239 ZNRF2Q8NHG8 242 aa6.69□□□□□ -1.34
C11orf54-201ENST00000331239 TRGV4A0A0C4DH28 118 aa6.68□□□□□ -1.34
C11orf54-201ENST00000331239 I3L3M4 83 aa6.68□□□□□ -1.34
C11orf54-201ENST00000331239 DEFB130BP0DP73 79 aa6.68□□□□□ -1.34
C11orf54-201ENST00000331239 DEFB130AP0DP74 79 aa6.68□□□□□ -1.34
C11orf54-201ENST00000331239 TSPEAR-AS2P59090 65 aa6.68□□□□□ -1.34
C11orf54-201ENST00000331239 NFE4Q86UQ8 179 aa6.68□□□□□ -1.34
C11orf54-201ENST00000331239 C20orf203Q8NBC4 194 aa6.68□□□□□ -1.34
C11orf54-201ENST00000331239 SIGMAR1Q99720 223 aa6.68□□□□□ -1.34
C11orf54-201ENST00000331239 A0A0J9YY99 117 aa6.68□□□□□ -1.34
C11orf54-201ENST00000331239 K7EQD1 137 aa6.68□□□□□ -1.34
C11orf54-201ENST00000331239 UBE2D1P51668 147 aa6.68□□□□□ -1.34
C11orf54-201ENST00000331239 RPL24P83731 157 aaKnown RBP6.68□□□□□ -1.34
C11orf54-201ENST00000331239 CELA1Q9UNI1 258 aa6.68□□□□□ -1.34
C11orf54-201ENST00000331239 F8W1H4 67 aa6.67□□□□□ -1.34
C11orf54-201ENST00000331239 P0DMU3 169 aa6.67□□□□□ -1.34
C11orf54-201ENST00000331239 FAM231AP0DMU4 169 aa6.67□□□□□ -1.34
C11orf54-201ENST00000331239 FAM231CP0DMU5 169 aa6.67□□□□□ -1.34
C11orf54-201ENST00000331239 TIRAPP58753 221 aa6.67□□□□□ -1.34
C11orf54-201ENST00000331239 H3BMG7 143 aa6.67□□□□□ -1.34
C11orf54-201ENST00000331239 J3QQQ9 107 aa6.67□□□□□ -1.34
C11orf54-201ENST00000331239 SPANXB1Q9NS25 103 aaPredicted RBP6.67□□□□□ -1.34
C11orf54-201ENST00000331239 LGALS3P17931 250 aaKnown RBP6.66□□□□□ -1.34
C11orf54-201ENST00000331239 RPL36AP83881 106 aaKnown RBP6.66□□□□□ -1.34
C11orf54-201ENST00000331239 SMAGPQ0VAQ4 97 aa6.66□□□□□ -1.34
C11orf54-201ENST00000331239 DAZ4Q86SG3 579 aaKnown RBP6.66□□□□□ -1.34
C11orf54-201ENST00000331239 C15orf53Q8NAA6 179 aa6.66□□□□□ -1.34
C11orf54-201ENST00000331239 RPL36ALQ969Q0 106 aaKnown RBP6.66□□□□□ -1.34
C11orf54-201ENST00000331239 OPRPNQ99935 248 aaPredicted RBP6.66□□□□□ -1.34
C11orf54-201ENST00000331239 DAZ3Q9NR90 486 aaKnown RBP6.66□□□□□ -1.34
C11orf54-201ENST00000331239 IGLV4-3A0A075B6K6 122 aa6.66□□□□□ -1.34
C11orf54-201ENST00000331239 DEFB4AO15263 64 aa6.66□□□□□ -1.34
C11orf54-201ENST00000331239 AMELXQ99217 191 aa6.66□□□□□ -1.34
C11orf54-201ENST00000331239 LINC00694P0DN24 101 aa6.65□□□□□ -1.34
C11orf54-201ENST00000331239 WFDC2Q14508 124 aa6.65□□□□□ -1.34
C11orf54-201ENST00000331239 SLC25A29Q8N8R3 303 aa6.65□□□□□ -1.34
C11orf54-201ENST00000331239 NBEAL2Q6ZNJ1 2754 aa6.65□□□□□ -1.35
C11orf54-201ENST00000331239 IGHV3-73A0A0B4J1V6 119 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms