RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 H3BMG7 143 aa14.42□□□□□ -0.1
RIPPLY3-201ENST00000329553 UBE2D1P51668 147 aa14.42□□□□□ -0.1
RIPPLY3-201ENST00000329553 RPL24P83731 157 aaKnown RBP14.42□□□□□ -0.1
RIPPLY3-201ENST00000329553 CMYA5Q8N3K9 4069 aa14.42□□□□□ -0.1
RIPPLY3-201ENST00000329553 A0A0J9YY99 117 aa14.41□□□□□ -0.1
RIPPLY3-201ENST00000329553 SRSF9Q13242 221 aaKnown RBP eCLIP14.41□□□□□ -0.1
RIPPLY3-201ENST00000329553 NBEAL2Q6ZNJ1 2754 aa14.41□□□□□ -0.1
RIPPLY3-201ENST00000329553 WFDC2Q14508 124 aa14.41□□□□□ -0.1
RIPPLY3-201ENST00000329553 C20orf203Q8NBC4 194 aa14.41□□□□□ -0.1
RIPPLY3-201ENST00000329553 TSPEAR-AS2P59090 65 aa14.4□□□□□ -0.1
RIPPLY3-201ENST00000329553 NFE4Q86UQ8 179 aa14.4□□□□□ -0.1
RIPPLY3-201ENST00000329553 SLC25A29Q8N8R3 303 aa14.4□□□□□ -0.1
RIPPLY3-201ENST00000329553 K7EQD1 137 aa14.39□□□□□ -0.11
RIPPLY3-201ENST00000329553 TMEM170BQ5T4T1 132 aa14.39□□□□□ -0.11
RIPPLY3-201ENST00000329553 SPANXB1Q9NS25 103 aaPredicted RBP14.39□□□□□ -0.11
RIPPLY3-201ENST00000329553 IGHV3-38A0A0C4DH36 116 aa14.39□□□□□ -0.11
RIPPLY3-201ENST00000329553 PGPEP1Q9NXJ5 209 aa14.39□□□□□ -0.11
RIPPLY3-201ENST00000329553 PRO0461Q9UI25 63 aa14.39□□□□□ -0.11
RIPPLY3-201ENST00000329553 EGFEM1PQ0D2K5 195 aa14.38□□□□□ -0.11
RIPPLY3-201ENST00000329553 AMELXQ99217 191 aa14.38□□□□□ -0.11
RIPPLY3-201ENST00000329553 COL6A5A8TX70 2615 aa14.37□□□□□ -0.11
RIPPLY3-201ENST00000329553 TRBV10-1A0A0K0K1A3 114 aa14.37□□□□□ -0.11
RIPPLY3-201ENST00000329553 DEFB130BP0DP73 79 aa14.37□□□□□ -0.11
RIPPLY3-201ENST00000329553 DEFB130AP0DP74 79 aa14.37□□□□□ -0.11
RIPPLY3-201ENST00000329553 OPRPNQ99935 248 aaPredicted RBP14.37□□□□□ -0.11
RIPPLY3-201ENST00000329553 CIDEAO60543 219 aa14.37□□□□□ -0.11
RIPPLY3-201ENST00000329553 GAGE13Q4V321 117 aa14.37□□□□□ -0.11
RIPPLY3-201ENST00000329553 LINC00612Q8N6U2 182 aa14.37□□□□□ -0.11
RIPPLY3-201ENST00000329553 J3QQQ9 107 aa14.35□□□□□ -0.11
RIPPLY3-201ENST00000329553 RPL36AP83881 106 aaKnown RBP14.35□□□□□ -0.11
RIPPLY3-201ENST00000329553 FHL2Q14192 279 aa14.35□□□□□ -0.11
RIPPLY3-201ENST00000329553 RPL36ALQ969Q0 106 aaKnown RBP14.35□□□□□ -0.11
RIPPLY3-201ENST00000329553 PKD1L1Q8TDX9 2849 aa14.35□□□□□ -0.11
RIPPLY3-201ENST00000329553 TRGV4A0A0C4DH28 118 aa14.35□□□□□ -0.11
RIPPLY3-201ENST00000329553 IGHV3-30P01768 117 aa14.35□□□□□ -0.11
RIPPLY3-201ENST00000329553 IGHV3-30-5P0DP03 117 aa14.35□□□□□ -0.11
RIPPLY3-201ENST00000329553 CHCHD7Q9BUK0 85 aa14.35□□□□□ -0.11
RIPPLY3-201ENST00000329553 DEFB4AO15263 64 aa14.34□□□□□ -0.11
RIPPLY3-201ENST00000329553 TMEM223A0PJW6 202 aa14.34□□□□□ -0.11
RIPPLY3-201ENST00000329553 GAGE12JA6NER3 117 aa14.34□□□□□ -0.11
RIPPLY3-201ENST00000329553 TSPAN13O95857 204 aa14.34□□□□□ -0.11
RIPPLY3-201ENST00000329553 GAGE4Q13068 117 aa14.34□□□□□ -0.11
RIPPLY3-201ENST00000329553 GAGE5Q13069 117 aa14.34□□□□□ -0.11
RIPPLY3-201ENST00000329553 TRBV6-4A0A1B0GX49 114 aa14.33□□□□□ -0.12
RIPPLY3-201ENST00000329553 RNF183Q96D59 192 aa14.33□□□□□ -0.12
RIPPLY3-201ENST00000329553 IGLV4-3A0A075B6K6 122 aa14.33□□□□□ -0.12
RIPPLY3-201ENST00000329553 IGHV4-28A0A0C4DH34 117 aa14.33□□□□□ -0.12
RIPPLY3-201ENST00000329553 FAM222AQ5U5X8 452 aa14.33□□□□□ -0.12
RIPPLY3-201ENST00000329553 LOC100131303A0A0U1RQF7 123 aa14.32□□□□□ -0.12
RIPPLY3-201ENST00000329553 LEPROTO15243 131 aa14.32□□□□□ -0.12
RIPPLY3-201ENST00000329553 LGALS3P17931 250 aaKnown RBP14.32□□□□□ -0.12
RIPPLY3-201ENST00000329553 ETDBQ3ZM63 59 aa14.32□□□□□ -0.12
RIPPLY3-201ENST00000329553 SH2D6Q7Z4S9 175 aa14.32□□□□□ -0.12
RIPPLY3-201ENST00000329553 UBE2D3P61077 147 aa14.31□□□□□ -0.12
RIPPLY3-201ENST00000329553 UBE2D2P62837 147 aa14.31□□□□□ -0.12
RIPPLY3-201ENST00000329553 ZNF22P17026 224 aaPredicted RBP14.31□□□□□ -0.12
RIPPLY3-201ENST00000329553 APOMO95445 188 aa14.3□□□□□ -0.12
RIPPLY3-201ENST00000329553 Q8NAQ8 132 aa14.3□□□□□ -0.12
RIPPLY3-201ENST00000329553 PYGO1Q9Y3Y4 419 aa14.3□□□□□ -0.12
RIPPLY3-201ENST00000329553 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.3□□□□□ -0.12
RIPPLY3-201ENST00000329553 IGKV2-29A2NJV5 120 aaPredicted RBP14.3□□□□□ -0.12
RIPPLY3-201ENST00000329553 LYRM9A8MSI8 78 aa14.3□□□□□ -0.12
RIPPLY3-201ENST00000329553 MIFP14174 115 aa14.3□□□□□ -0.12
RIPPLY3-201ENST00000329553 DAZ4Q86SG3 579 aaKnown RBP14.3□□□□□ -0.12
RIPPLY3-201ENST00000329553 MTURNQ8N3F0 131 aa14.3□□□□□ -0.12
RIPPLY3-201ENST00000329553 VCX2Q9H322 139 aa14.3□□□□□ -0.12
RIPPLY3-201ENST00000329553 DAZ3Q9NR90 486 aaKnown RBP14.3□□□□□ -0.12
RIPPLY3-201ENST00000329553 CFC1BP0CG36 223 aa14.29□□□□□ -0.12
RIPPLY3-201ENST00000329553 CFC1P0CG37 223 aa14.29□□□□□ -0.12
RIPPLY3-201ENST00000329553 CEMP1Q6PRD7 247 aaPredicted RBP14.29□□□□□ -0.12
RIPPLY3-201ENST00000329553 FAM104AQ969W3 186 aa14.29□□□□□ -0.12
RIPPLY3-201ENST00000329553 A8MZ25 164 aa14.29□□□□□ -0.12
RIPPLY3-201ENST00000329553 J3QR89 54 aa14.29□□□□□ -0.12
RIPPLY3-201ENST00000329553 A0A0J9YXV3 536 aa14.28□□□□□ -0.12
RIPPLY3-201ENST00000329553 NTM-AS1Q6ZSK4 140 aa14.28□□□□□ -0.12
RIPPLY3-201ENST00000329553 UBE2D4Q9Y2X8 147 aa14.27□□□□□ -0.13
RIPPLY3-201ENST00000329553 CRYBA4P53673 196 aa14.26□□□□□ -0.13
RIPPLY3-201ENST00000329553 LOC107984156A0A0G2JMH3 177 aa14.26□□□□□ -0.13
RIPPLY3-201ENST00000329553 SMCPP49901 116 aaPredicted RBP14.26□□□□□ -0.13
RIPPLY3-201ENST00000329553 ARL17AQ8IVW1 177 aa14.26□□□□□ -0.13
RIPPLY3-201ENST00000329553 C10orf126Q8N4M7 172 aa14.26□□□□□ -0.13
RIPPLY3-201ENST00000329553 LYRM7Q5U5X0 104 aa14.25□□□□□ -0.13
RIPPLY3-201ENST00000329553 CELA1Q9UNI1 258 aa14.25□□□□□ -0.13
RIPPLY3-201ENST00000329553 PSMB2P49721 201 aa14.24□□□□□ -0.13
RIPPLY3-201ENST00000329553 MRPS36P82909 103 aaKnown RBP14.24□□□□□ -0.13
RIPPLY3-201ENST00000329553 SFTA2Q6UW10 78 aa14.24□□□□□ -0.13
RIPPLY3-201ENST00000329553 SPANXA1Q9NS26 97 aa14.24□□□□□ -0.13
RIPPLY3-201ENST00000329553 PRO1854Q9UHT4 67 aa14.23□□□□□ -0.13
RIPPLY3-201ENST00000329553 DNAH3Q8TD57 4116 aa14.23□□□□□ -0.13
RIPPLY3-201ENST00000329553 IGHV3-64A0A075B6Q5 118 aa14.22□□□□□ -0.13
RIPPLY3-201ENST00000329553 GAGE12HA6NDE8 117 aa14.22□□□□□ -0.13
RIPPLY3-201ENST00000329553 RNASE13Q5GAN3 156 aaKnown RBP14.22□□□□□ -0.13
RIPPLY3-201ENST00000329553 ATP6V0E2Q8NHE4 81 aa14.22□□□□□ -0.13
RIPPLY3-201ENST00000329553 SPATA25Q9BR10 227 aa14.22□□□□□ -0.13
RIPPLY3-201ENST00000329553 LINC00694P0DN24 101 aa14.22□□□□□ -0.13
RIPPLY3-201ENST00000329553 DAD1P61803 113 aa14.22□□□□□ -0.13
RIPPLY3-201ENST00000329553 GTSF1LQ9H1H1 148 aa14.22□□□□□ -0.13
RIPPLY3-201ENST00000329553 RETNQ9HD89 108 aa14.22□□□□□ -0.13
RIPPLY3-201ENST00000329553 ANK2Q01484 3957 aa14.22□□□□□ -0.13
RIPPLY3-201ENST00000329553 TRBV20-1A0A075B6N2 111 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms