RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 IGFL2Q6UWQ7 119 aa12.38□□□□□ -0.43
PACS1-201ENST00000320580 KIR2DL5BQ8NHK3 375 aa12.38□□□□□ -0.43
PACS1-201ENST00000320580 SLPIP03973 132 aa12.38□□□□□ -0.43
PACS1-201ENST00000320580 TRBV12-3P01733 135 aa12.37□□□□□ -0.43
PACS1-201ENST00000320580 ENHOQ6UWT2 76 aa12.37□□□□□ -0.43
PACS1-201ENST00000320580 USP34Q70CQ2 3546 aa12.37□□□□□ -0.43
PACS1-201ENST00000320580 V9GYY9 64 aa12.37□□□□□ -0.43
PACS1-201ENST00000320580 TRGV4A0A0C4DH28 118 aa12.37□□□□□ -0.43
PACS1-201ENST00000320580 CLPSL1A2RUU4 121 aa12.35□□□□□ -0.43
PACS1-201ENST00000320580 TRBV6-5A0A0K0K1A5 114 aa12.35□□□□□ -0.43
PACS1-201ENST00000320580 WFDC9Q8NEX5 89 aa12.35□□□□□ -0.43
PACS1-201ENST00000320580 MPLKIPQ8TAP9 179 aa12.35□□□□□ -0.43
PACS1-201ENST00000320580 UPK3BQ9BT76 320 aa12.35□□□□□ -0.43
PACS1-201ENST00000320580 F8W735 103 aaPredicted RBP12.34□□□□□ -0.43
PACS1-201ENST00000320580 FREM2Q5SZK8 3169 aa12.34□□□□□ -0.43
PACS1-201ENST00000320580 LY6LH3BQJ8 138 aa12.33□□□□□ -0.44
PACS1-201ENST00000320580 NDUFA1O15239 70 aa12.33□□□□□ -0.44
PACS1-201ENST00000320580 BRI3O95415 125 aa12.33□□□□□ -0.44
PACS1-201ENST00000320580 CRYGAP11844 174 aa12.32□□□□□ -0.44
PACS1-201ENST00000320580 STHQ8IWL8 128 aa12.32□□□□□ -0.44
PACS1-201ENST00000320580 XCL2Q9UBD3 114 aa12.32□□□□□ -0.44
PACS1-201ENST00000320580 JMJD7-PLA2G4BH0Y9G9 81 aa12.32□□□□□ -0.44
PACS1-201ENST00000320580 DPH3Q96FX2 82 aa12.32□□□□□ -0.44
PACS1-201ENST00000320580 C5orf38Q86SI9 138 aa12.32□□□□□ -0.44
PACS1-201ENST00000320580 LINC00467Q9BRT7 94 aa12.32□□□□□ -0.44
PACS1-201ENST00000320580 PF4P02776 101 aa12.31□□□□□ -0.44
PACS1-201ENST00000320580 SNURFQ9Y675 71 aa12.31□□□□□ -0.44
PACS1-201ENST00000320580 CCDC168Q8NDH2 2452 aa12.31□□□□□ -0.44
PACS1-201ENST00000320580 GNLYP22749 145 aa12.31□□□□□ -0.44
PACS1-201ENST00000320580 RPS28P62857 69 aaKnown RBP12.31□□□□□ -0.44
PACS1-201ENST00000320580 BPESC1Q9GZL8 116 aa12.31□□□□□ -0.44
PACS1-201ENST00000320580 PKD1L2Q7Z442 2459 aa12.31□□□□□ -0.44
PACS1-201ENST00000320580 Q6JHZ5 121 aa12.31□□□□□ -0.44
PACS1-201ENST00000320580 INSP01308 110 aa12.3□□□□□ -0.44
PACS1-201ENST00000320580 PROK1P58294 105 aa12.3□□□□□ -0.44
PACS1-201ENST00000320580 TIMM17BO60830 172 aa12.3□□□□□ -0.44
PACS1-201ENST00000320580 COX7B2Q8TF08 81 aa12.3□□□□□ -0.44
PACS1-201ENST00000320580 CFHR3Q02985 330 aa12.29□□□□□ -0.44
PACS1-201ENST00000320580 MRPS36P82909 103 aaKnown RBP12.29□□□□□ -0.44
PACS1-201ENST00000320580 HIVEP3Q5T1R4 2406 aa12.29□□□□□ -0.44
PACS1-201ENST00000320580 DAD1P61803 113 aa12.28□□□□□ -0.44
PACS1-201ENST00000320580 EBI3Q14213 229 aa12.28□□□□□ -0.44
PACS1-201ENST00000320580 Q8NA96 180 aa12.28□□□□□ -0.44
PACS1-201ENST00000320580 U3KQE9 123 aa12.28□□□□□ -0.44
PACS1-201ENST00000320580 C1orf195Q5TG92 126 aa12.28□□□□□ -0.44
PACS1-201ENST00000320580 PYGO1Q9Y3Y4 419 aa12.28□□□□□ -0.44
PACS1-201ENST00000320580 RPL35AP18077 110 aaKnown RBP12.26□□□□□ -0.45
PACS1-201ENST00000320580 GRNP28799 593 aaKnown RBP12.26□□□□□ -0.45
PACS1-201ENST00000320580 NDUFC2-KCTD14E9PQ53 114 aa12.26□□□□□ -0.45
PACS1-201ENST00000320580 C5orf56Q8N8D9 126 aa12.25□□□□□ -0.45
PACS1-201ENST00000320580 LRRK2Q5S007 2527 aa12.25□□□□□ -0.45
PACS1-201ENST00000320580 ODF3BA8MYP8 253 aa12.24□□□□□ -0.45
PACS1-201ENST00000320580 LINC00846Q9NV44 126 aa12.23□□□□□ -0.45
PACS1-201ENST00000320580 SMIM26A0A096LP01 95 aa12.23□□□□□ -0.45
PACS1-201ENST00000320580 AKAP13Q12802 2813 aa12.23□□□□□ -0.45
PACS1-201ENST00000320580 ATP5EP2Q5VTU8 51 aa12.23□□□□□ -0.45
PACS1-201ENST00000320580 BLCAPP62952 87 aa12.23□□□□□ -0.45
PACS1-201ENST00000320580 FAM222AQ5U5X8 452 aa12.23□□□□□ -0.45
PACS1-201ENST00000320580 TMEM256-PLSCR3K7ERE1 68 aa12.22□□□□□ -0.45
PACS1-201ENST00000320580 ZFP36P26651 326 aaKnown RBP12.22□□□□□ -0.45
PACS1-201ENST00000320580 SS18Q15532 418 aa12.22□□□□□ -0.45
PACS1-201ENST00000320580 PRO0628Q9UI54 55 aa12.22□□□□□ -0.45
PACS1-201ENST00000320580 PRB2P02812 416 aaPredicted RBP12.22□□□□□ -0.45
PACS1-201ENST00000320580 SERP1Q9Y6X1 66 aa12.22□□□□□ -0.45
PACS1-201ENST00000320580 DSPP15924 2871 aaKnown RBP12.21□□□□□ -0.45
PACS1-201ENST00000320580 XCL1P47992 114 aa12.21□□□□□ -0.46
PACS1-201ENST00000320580 SMIM11BQ8TCY0 68 aa12.21□□□□□ -0.46
PACS1-201ENST00000320580 SMCR5Q8TEV8 140 aa12.21□□□□□ -0.46
PACS1-201ENST00000320580 TNFRSF13BO14836 293 aaPredicted RBP12.2□□□□□ -0.46
PACS1-201ENST00000320580 HILS1P60008 231 aa12.2□□□□□ -0.46
PACS1-201ENST00000320580 CLPSL2Q6UWE3 100 aa12.2□□□□□ -0.46
PACS1-201ENST00000320580 MYO9AB2RTY4 2548 aa12.2□□□□□ -0.46
PACS1-201ENST00000320580 KLLNB2CW77 178 aa12.19□□□□□ -0.46
PACS1-201ENST00000320580 F8WEM9 126 aa12.19□□□□□ -0.46
PACS1-201ENST00000320580 DCANP1Q8TF63 244 aa12.19□□□□□ -0.46
PACS1-201ENST00000320580 UBE2D4Q9Y2X8 147 aa12.19□□□□□ -0.46
PACS1-201ENST00000320580 SCXQ7RTU7 201 aa12.19□□□□□ -0.46
PACS1-201ENST00000320580 J3QLI3 93 aa12.18□□□□□ -0.46
PACS1-201ENST00000320580 RAI1Q7Z5J4 1906 aaPredicted RBP12.18□□□□□ -0.46
PACS1-201ENST00000320580 ZNF462Q96JM2 2506 aa12.18□□□□□ -0.46
PACS1-201ENST00000320580 DMXL1Q9Y485 3027 aa12.18□□□□□ -0.46
PACS1-201ENST00000320580 FAM19A1Q7Z5A9 133 aa12.17□□□□□ -0.46
PACS1-201ENST00000320580 Q8N2B8 174 aa12.17□□□□□ -0.46
PACS1-201ENST00000320580 AMELXQ99217 191 aa12.17□□□□□ -0.46
PACS1-201ENST00000320580 KIF25-AS1Q9Y6Z4 181 aa12.17□□□□□ -0.46
PACS1-201ENST00000320580 A0A1W2PRX2 142 aa12.17□□□□□ -0.46
PACS1-201ENST00000320580 C9orf85Q96MD7 179 aa12.17□□□□□ -0.46
PACS1-201ENST00000320580 NAV2Q8IVL1 2488 aa12.17□□□□□ -0.46
PACS1-201ENST00000320580 USP9YO00507 2555 aaPredicted RBP12.16□□□□□ -0.46
PACS1-201ENST00000320580 H3BUA1 57 aa12.16□□□□□ -0.46
PACS1-201ENST00000320580 A0A087WYN8 130 aa12.16□□□□□ -0.46
PACS1-201ENST00000320580 C11orf44Q8N8P7 122 aa12.16□□□□□ -0.46
PACS1-201ENST00000320580 TLN2Q9Y4G6 2542 aa12.16□□□□□ -0.46
PACS1-201ENST00000320580 BOD1L1Q8NFC6 3051 aa12.15□□□□□ -0.46
PACS1-201ENST00000320580 Q8N6K4 173 aa12.15□□□□□ -0.46
PACS1-201ENST00000320580 FASNP49327 2511 aaKnown RBP12.15□□□□□ -0.46
PACS1-201ENST00000320580 FAM19A4Q96LR4 140 aa12.15□□□□□ -0.46
PACS1-201ENST00000320580 PRM2P04554 102 aa12.14□□□□□ -0.47
PACS1-201ENST00000320580 LINC00315P59091 139 aa12.14□□□□□ -0.47
PACS1-201ENST00000320580 DEFB121Q5J5C9 76 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms