RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 DAZ4Q86SG3 579 aaKnown RBP6.82□□□□□ -1.32
TMEM39A-201ENST00000319172 DAZ3Q9NR90 486 aaKnown RBP6.82□□□□□ -1.32
TMEM39A-201ENST00000319172 TRAV4A0A0B4J268 109 aa6.81□□□□□ -1.32
TMEM39A-201ENST00000319172 TMEM126AQ9H061 195 aa6.81□□□□□ -1.32
TMEM39A-201ENST00000319172 ASPMQ8IZT6 3477 aa6.81□□□□□ -1.32
TMEM39A-201ENST00000319172 TEX15Q9BXT5 2789 aa6.81□□□□□ -1.32
TMEM39A-201ENST00000319172 TEX48A0A1B0GUV7 120 aa6.81□□□□□ -1.32
TMEM39A-201ENST00000319172 URB1-AS1Q96HZ7 61 aa6.81□□□□□ -1.32
TMEM39A-201ENST00000319172 C9orf85Q96MD7 179 aa6.81□□□□□ -1.32
TMEM39A-201ENST00000319172 COX8CQ7Z4L0 72 aa6.81□□□□□ -1.32
TMEM39A-201ENST00000319172 LAMA5O15230 3695 aa6.81□□□□□ -1.32
TMEM39A-201ENST00000319172 BVES-AS1Q5T3Y7 98 aa6.8□□□□□ -1.32
TMEM39A-201ENST00000319172 TIMM17AQ99595 171 aa6.8□□□□□ -1.32
TMEM39A-201ENST00000319172 IGHV4-4A0A075B6R2 117 aa6.8□□□□□ -1.32
TMEM39A-201ENST00000319172 K7ERJ3 54 aa6.8□□□□□ -1.32
TMEM39A-201ENST00000319172 LEPROTO15243 131 aa6.8□□□□□ -1.32
TMEM39A-201ENST00000319172 SLC25A29Q8N8R3 303 aa6.8□□□□□ -1.32
TMEM39A-201ENST00000319172 NKAPP1Q8N9T2 125 aa6.8□□□□□ -1.32
TMEM39A-201ENST00000319172 NEXN-AS1Q8NBZ9 246 aa6.8□□□□□ -1.32
TMEM39A-201ENST00000319172 HERVK_113P63121 156 aa6.8□□□□□ -1.32
TMEM39A-201ENST00000319172 SCRT2Q9NQ03 307 aa6.8□□□□□ -1.32
TMEM39A-201ENST00000319172 PRO0255Q9UI72 69 aa6.8□□□□□ -1.32
TMEM39A-201ENST00000319172 C11orf45Q8TAV5 145 aa6.79□□□□□ -1.32
TMEM39A-201ENST00000319172 DCHS1Q96JQ0 3298 aa6.79□□□□□ -1.32
TMEM39A-201ENST00000319172 TRAV26-1A0A087WT03 109 aa6.79□□□□□ -1.32
TMEM39A-201ENST00000319172 Q6ZUT4 128 aa6.79□□□□□ -1.32
TMEM39A-201ENST00000319172 VSIG2Q96IQ7 327 aa6.79□□□□□ -1.32
TMEM39A-201ENST00000319172 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.79□□□□□ -1.32
TMEM39A-201ENST00000319172 TRBV10-1A0A0K0K1A3 114 aa6.79□□□□□ -1.32
TMEM39A-201ENST00000319172 SPATA12Q7Z6I5 190 aa6.79□□□□□ -1.32
TMEM39A-201ENST00000319172 LAMTOR3Q9UHA4 124 aa6.78□□□□□ -1.32
TMEM39A-201ENST00000319172 KLK5Q9Y337 293 aaPredicted RBP6.78□□□□□ -1.32
TMEM39A-201ENST00000319172 TRAV12-1A0A0B4J245 112 aa6.78□□□□□ -1.32
TMEM39A-201ENST00000319172 TSPAN13O95857 204 aa6.78□□□□□ -1.32
TMEM39A-201ENST00000319172 LINC00467Q9BRT7 94 aa6.78□□□□□ -1.32
TMEM39A-201ENST00000319172 EDA2RQ9HAV5 297 aa6.78□□□□□ -1.32
TMEM39A-201ENST00000319172 COX11Q9Y6N1 276 aa6.78□□□□□ -1.32
TMEM39A-201ENST00000319172 KRTAP1-3Q8IUG1 177 aa6.78□□□□□ -1.32
TMEM39A-201ENST00000319172 C1orf158Q8N1D5 194 aa6.78□□□□□ -1.32
TMEM39A-201ENST00000319172 TRAV8-3A0A0A6YYJ7 113 aa6.78□□□□□ -1.32
TMEM39A-201ENST00000319172 Q9H8V8 135 aa6.78□□□□□ -1.32
TMEM39A-201ENST00000319172 KLK12Q9UKR0 248 aa6.78□□□□□ -1.32
TMEM39A-201ENST00000319172 ITPR2Q14571 2701 aa6.77□□□□□ -1.33
TMEM39A-201ENST00000319172 LOC100131303A0A0U1RQF7 123 aa6.77□□□□□ -1.33
TMEM39A-201ENST00000319172 STAB1Q9NY15 2570 aa6.77□□□□□ -1.33
TMEM39A-201ENST00000319172 UBE2BP63146 152 aa6.77□□□□□ -1.33
TMEM39A-201ENST00000319172 TRBV27A0A0K0K1C4 114 aa6.76□□□□□ -1.33
TMEM39A-201ENST00000319172 RS1O15537 224 aa6.76□□□□□ -1.33
TMEM39A-201ENST00000319172 POLR2KP53803 58 aaKnown RBP6.76□□□□□ -1.33
TMEM39A-201ENST00000319172 ITPR1Q14643 2758 aa6.76□□□□□ -1.33
TMEM39A-201ENST00000319172 SH2D6Q7Z4S9 175 aa6.76□□□□□ -1.33
TMEM39A-201ENST00000319172 CEND1Q8N111 149 aa6.76□□□□□ -1.33
TMEM39A-201ENST00000319172 IGHV4-28A0A0C4DH34 117 aa6.76□□□□□ -1.33
TMEM39A-201ENST00000319172 F8WEM9 126 aa6.76□□□□□ -1.33
TMEM39A-201ENST00000319172 KLK9Q2XQG4 91 aa6.76□□□□□ -1.33
TMEM39A-201ENST00000319172 MUC4Q99102 2169 aa6.75□□□□□ -1.33
TMEM39A-201ENST00000319172 IGHV4-30-4P0DP06 118 aa6.75□□□□□ -1.33
TMEM39A-201ENST00000319172 IGKV2D-26A0A0A0MRZ7 120 aa6.75□□□□□ -1.33
TMEM39A-201ENST00000319172 SMIM9A6NGZ8 99 aa6.75□□□□□ -1.33
TMEM39A-201ENST00000319172 RBMY1FQ15415 496 aaKnown RBP6.75□□□□□ -1.33
TMEM39A-201ENST00000319172 CAMK2N2Q96S95 79 aa6.75□□□□□ -1.33
TMEM39A-201ENST00000319172 TRBV6-5A0A0K0K1A5 114 aa6.75□□□□□ -1.33
TMEM39A-201ENST00000319172 E9PLD3 99 aa6.75□□□□□ -1.33
TMEM39A-201ENST00000319172 SIVA1O15304 175 aa6.75□□□□□ -1.33
TMEM39A-201ENST00000319172 TSHBP01222 138 aa6.75□□□□□ -1.33
TMEM39A-201ENST00000319172 DAND5Q8N907 189 aa6.75□□□□□ -1.33
TMEM39A-201ENST00000319172 Q8N976 141 aa6.75□□□□□ -1.33
TMEM39A-201ENST00000319172 IGLV4-3A0A075B6K6 122 aa6.74□□□□□ -1.33
TMEM39A-201ENST00000319172 RELNP78509 3460 aa6.74□□□□□ -1.33
TMEM39A-201ENST00000319172 DEFB131BA0A096LNP1 70 aa6.74□□□□□ -1.33
TMEM39A-201ENST00000319172 FXYD2P54710 66 aa6.74□□□□□ -1.33
TMEM39A-201ENST00000319172 ATXN8Q156A1 80 aa6.74□□□□□ -1.33
TMEM39A-201ENST00000319172 SEC61GP60059 68 aa6.74□□□□□ -1.33
TMEM39A-201ENST00000319172 LYRM9A8MSI8 78 aa6.73□□□□□ -1.33
TMEM39A-201ENST00000319172 FHL3Q13643 280 aa6.73□□□□□ -1.33
TMEM39A-201ENST00000319172 GAGE2EQ4V326 116 aa6.73□□□□□ -1.33
TMEM39A-201ENST00000319172 SPATA25Q9BR10 227 aa6.73□□□□□ -1.33
TMEM39A-201ENST00000319172 GAGE2DQ9UEU5 116 aa6.73□□□□□ -1.33
TMEM39A-201ENST00000319172 IL17DQ8TAD2 202 aa6.73□□□□□ -1.33
TMEM39A-201ENST00000319172 C12orf74Q32Q52 190 aa6.73□□□□□ -1.33
TMEM39A-201ENST00000319172 V9GYY9 64 aa6.73□□□□□ -1.33
TMEM39A-201ENST00000319172 C9orf118A6NHY6 69 aa6.72□□□□□ -1.33
TMEM39A-201ENST00000319172 COX7A2LO14548 114 aa6.72□□□□□ -1.33
TMEM39A-201ENST00000319172 MIFP14174 115 aa6.72□□□□□ -1.33
TMEM39A-201ENST00000319172 CDKN2A-AS1Q9UH64 79 aa6.72□□□□□ -1.33
TMEM39A-201ENST00000319172 ZANQ9Y493 2812 aa6.72□□□□□ -1.33
TMEM39A-201ENST00000319172 UTP20O75691 2785 aaKnown RBP6.72□□□□□ -1.33
TMEM39A-201ENST00000319172 A0A096LNJ9 63 aa6.72□□□□□ -1.33
TMEM39A-201ENST00000319172 TRBV6-4A0A1B0GX49 114 aa6.72□□□□□ -1.33
TMEM39A-201ENST00000319172 RPL32P62910 135 aaKnown RBP6.72□□□□□ -1.33
TMEM39A-201ENST00000319172 UBR5O95071 2799 aaPredicted RBP6.72□□□□□ -1.33
TMEM39A-201ENST00000319172 G3V4G9 280 aa6.72□□□□□ -1.33
TMEM39A-201ENST00000319172 CCL25O15444 150 aa6.72□□□□□ -1.33
TMEM39A-201ENST00000319172 RPL18AQ02543 176 aaKnown RBP6.72□□□□□ -1.33
TMEM39A-201ENST00000319172 RETNQ9HD89 108 aa6.72□□□□□ -1.33
TMEM39A-201ENST00000319172 ZFAND6Q6FIF0 208 aa6.71□□□□□ -1.33
TMEM39A-201ENST00000319172 Q6ZSN1 163 aa6.71□□□□□ -1.33
TMEM39A-201ENST00000319172 COL6A5A8TX70 2615 aa6.71□□□□□ -1.33
TMEM39A-201ENST00000319172 TAL2Q16559 108 aa6.71□□□□□ -1.34
TMEM39A-201ENST00000319172 PRO1854Q9UHT4 67 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms