RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.04□□□□□ -1.28
PTPRA-202ENST00000318266 TRBV7-7A0A0K0K1E9 115 aa7.04□□□□□ -1.28
PTPRA-202ENST00000318266 FAM240AA0A1B0GVK7 77 aa7.04□□□□□ -1.28
PTPRA-202ENST00000318266 HOXD3P31249 432 aaPredicted RBP7.04□□□□□ -1.28
PTPRA-202ENST00000318266 DAZ2Q13117 558 aaKnown RBP7.04□□□□□ -1.28
PTPRA-202ENST00000318266 DAZ4Q86SG3 579 aaKnown RBP7.04□□□□□ -1.28
PTPRA-202ENST00000318266 DAZ3Q9NR90 486 aaKnown RBP7.04□□□□□ -1.28
PTPRA-202ENST00000318266 NDUFA7O95182 113 aa7.03□□□□□ -1.28
PTPRA-202ENST00000318266 DGAT2L7PQ6IED9 249 aa7.03□□□□□ -1.28
PTPRA-202ENST00000318266 YAE1D1Q9NRH1 226 aa7.03□□□□□ -1.28
PTPRA-202ENST00000318266 LINC01600Q96MT4 127 aa7.03□□□□□ -1.28
PTPRA-202ENST00000318266 Q9HAA7 133 aa7.03□□□□□ -1.28
PTPRA-202ENST00000318266 TINCRA0A1B0GVN0 87 aa7.03□□□□□ -1.28
PTPRA-202ENST00000318266 COX6A2Q02221 97 aa7.03□□□□□ -1.28
PTPRA-202ENST00000318266 GAGE2AQ6NT46 116 aa7.03□□□□□ -1.28
PTPRA-202ENST00000318266 UBE2D4Q9Y2X8 147 aa7.03□□□□□ -1.28
PTPRA-202ENST00000318266 PYGO1Q9Y3Y4 419 aa7.03□□□□□ -1.28
PTPRA-202ENST00000318266 LRRK2Q5S007 2527 aa7.03□□□□□ -1.28
PTPRA-202ENST00000318266 USP9YO00507 2555 aaPredicted RBP7.02□□□□□ -1.29
PTPRA-202ENST00000318266 LINC00308Q8TCZ7 52 aa7.02□□□□□ -1.29
PTPRA-202ENST00000318266 CHCHD7Q9BUK0 85 aa7.02□□□□□ -1.29
PTPRA-202ENST00000318266 CIRBPQ14011 172 aaKnown RBP7.02□□□□□ -1.29
PTPRA-202ENST00000318266 USP9XQ93008 2570 aaPredicted RBP7.02□□□□□ -1.29
PTPRA-202ENST00000318266 TRAV13-1A0A0B4J241 112 aa7.01□□□□□ -1.29
PTPRA-202ENST00000318266 BAALC-AS2P0C853 105 aa7.01□□□□□ -1.29
PTPRA-202ENST00000318266 SOSTDC1Q6X4U4 206 aa7.01□□□□□ -1.29
PTPRA-202ENST00000318266 DEFB121Q5J5C9 76 aa7.01□□□□□ -1.29
PTPRA-202ENST00000318266 PIK3CD-AS1Q5SR53 167 aa7.01□□□□□ -1.29
PTPRA-202ENST00000318266 FAM218AQ96MZ4 157 aa7.01□□□□□ -1.29
PTPRA-202ENST00000318266 TMEM126AQ9H061 195 aa7.01□□□□□ -1.29
PTPRA-202ENST00000318266 HECTD1Q9ULT8 2610 aa7□□□□□ -1.29
PTPRA-202ENST00000318266 IGHV4-61A0A0C4DH41 118 aa7□□□□□ -1.29
PTPRA-202ENST00000318266 COX7A2LO14548 114 aa7□□□□□ -1.29
PTPRA-202ENST00000318266 HERVK_113P63121 156 aa7□□□□□ -1.29
PTPRA-202ENST00000318266 MYO9AB2RTY4 2548 aa7□□□□□ -1.29
PTPRA-202ENST00000318266 K7EQG2 157 aa7□□□□□ -1.29
PTPRA-202ENST00000318266 PRIMA1Q86XR5 153 aa7□□□□□ -1.29
PTPRA-202ENST00000318266 EDA2RQ9HAV5 297 aa7□□□□□ -1.29
PTPRA-202ENST00000318266 ZANQ9Y493 2812 aa6.99□□□□□ -1.29
PTPRA-202ENST00000318266 IGLV1-40P01703 118 aa6.99□□□□□ -1.29
PTPRA-202ENST00000318266 C3orf22Q8N5N4 141 aa6.99□□□□□ -1.29
PTPRA-202ENST00000318266 POLQO75417 2590 aa6.99□□□□□ -1.29
PTPRA-202ENST00000318266 NDUFA1O15239 70 aa6.99□□□□□ -1.29
PTPRA-202ENST00000318266 TIRAPP58753 221 aa6.99□□□□□ -1.29
PTPRA-202ENST00000318266 SPANXA1Q9NS26 97 aa6.99□□□□□ -1.29
PTPRA-202ENST00000318266 DEFB131AP59861 70 aa6.99□□□□□ -1.29
PTPRA-202ENST00000318266 LINC00643Q86TS7 51 aa6.99□□□□□ -1.29
PTPRA-202ENST00000318266 UTP20O75691 2785 aaKnown RBP6.98□□□□□ -1.29
PTPRA-202ENST00000318266 A6NDX4 124 aa6.98□□□□□ -1.29
PTPRA-202ENST00000318266 K7EMT4 169 aa6.98□□□□□ -1.29
PTPRA-202ENST00000318266 CFHR3Q02985 330 aa6.98□□□□□ -1.29
PTPRA-202ENST00000318266 WNK1Q9H4A3 2382 aa6.98□□□□□ -1.29
PTPRA-202ENST00000318266 IGHV3OR16-12A0A075B7B8 117 aa6.98□□□□□ -1.29
PTPRA-202ENST00000318266 H3BUA1 57 aa6.98□□□□□ -1.29
PTPRA-202ENST00000318266 HIST2H2BDQ6DRA6 164 aa6.98□□□□□ -1.29
PTPRA-202ENST00000318266 SDIM1Q6ZPB5 146 aa6.98□□□□□ -1.29
PTPRA-202ENST00000318266 ACYP1P07311 99 aa6.97□□□□□ -1.29
PTPRA-202ENST00000318266 IGKV3D-7A0A0C4DH55 119 aa6.97□□□□□ -1.29
PTPRA-202ENST00000318266 UQCRQO14949 82 aa6.97□□□□□ -1.29
PTPRA-202ENST00000318266 DEFB136Q30KP8 78 aa6.97□□□□□ -1.29
PTPRA-202ENST00000318266 IGKV3OR2-268A0A0C4DH90 116 aa6.96□□□□□ -1.29
PTPRA-202ENST00000318266 hADV29S1A0JD25 119 aa6.96□□□□□ -1.29
PTPRA-202ENST00000318266 TIMM17BO60830 172 aa6.96□□□□□ -1.29
PTPRA-202ENST00000318266 LINC00242Q5T6M2 205 aa6.96□□□□□ -1.29
PTPRA-202ENST00000318266 SETD2Q9BYW2 2564 aaPredicted RBP6.96□□□□□ -1.3
PTPRA-202ENST00000318266 IGHV3-53P01767 116 aa6.96□□□□□ -1.3
PTPRA-202ENST00000318266 C9orf129Q5T035 196 aaKnown RBP6.96□□□□□ -1.3
PTPRA-202ENST00000318266 SPATA3Q8NHX4 192 aa6.96□□□□□ -1.3
PTPRA-202ENST00000318266 IMUPQ9GZP8 106 aa6.96□□□□□ -1.3
PTPRA-202ENST00000318266 IGHV4-59P01825 116 aa6.95□□□□□ -1.3
PTPRA-202ENST00000318266 PIMREGQ9BSJ6 248 aa6.95□□□□□ -1.3
PTPRA-202ENST00000318266 CYSTM1Q9H1C7 97 aa6.95□□□□□ -1.3
PTPRA-202ENST00000318266 C14orf132Q9NPU4 83 aa6.95□□□□□ -1.3
PTPRA-202ENST00000318266 C22orf24Q9Y442 160 aa6.95□□□□□ -1.3
PTPRA-202ENST00000318266 C19orf84I3L1E1 186 aa6.95□□□□□ -1.3
PTPRA-202ENST00000318266 AVPP01185 164 aa6.95□□□□□ -1.3
PTPRA-202ENST00000318266 PSMB8P28062 276 aa6.95□□□□□ -1.3
PTPRA-202ENST00000318266 TOMM7Q9P0U1 55 aa6.95□□□□□ -1.3
PTPRA-202ENST00000318266 JMJD1CQ15652 2540 aa6.95□□□□□ -1.3
PTPRA-202ENST00000318266 A0A087WVE0 104 aa6.95□□□□□ -1.3
PTPRA-202ENST00000318266 RBMY1BA6NDE4 496 aaKnown RBP6.95□□□□□ -1.3
PTPRA-202ENST00000318266 RBMY1EA6NEQ0 496 aaKnown RBP6.95□□□□□ -1.3
PTPRA-202ENST00000318266 SMIM1B2RUZ4 78 aa6.95□□□□□ -1.3
PTPRA-202ENST00000318266 RBMY1DP0C7P1 496 aaKnown RBP6.95□□□□□ -1.3
PTPRA-202ENST00000318266 UNC79Q9P2D8 2635 aa6.94□□□□□ -1.3
PTPRA-202ENST00000318266 ATP5G1P05496 136 aa6.94□□□□□ -1.3
PTPRA-202ENST00000318266 LINC00526Q96FQ7 95 aa6.94□□□□□ -1.3
PTPRA-202ENST00000318266 CSDC2Q9Y534 153 aaKnown RBP6.94□□□□□ -1.3
PTPRA-202ENST00000318266 DNAL4O96015 105 aa6.94□□□□□ -1.3
PTPRA-202ENST00000318266 BEAN1Q3B7T3 259 aa6.94□□□□□ -1.3
PTPRA-202ENST00000318266 DNAJC30Q96LL9 226 aa6.94□□□□□ -1.3
PTPRA-202ENST00000318266 ABCA12Q86UK0 2595 aa6.94□□□□□ -1.3
PTPRA-202ENST00000318266 ATP5J2P56134 94 aa6.93□□□□□ -1.3
PTPRA-202ENST00000318266 ZNF415Q09FC8 603 aa6.93□□□□□ -1.3
PTPRA-202ENST00000318266 DOPEY1Q5JWR5 2465 aa6.93□□□□□ -1.3
PTPRA-202ENST00000318266 NRGNQ92686 78 aa6.93□□□□□ -1.3
PTPRA-202ENST00000318266 TRACP01848 142 aa6.93□□□□□ -1.3
PTPRA-202ENST00000318266 COX7CP15954 63 aa6.93□□□□□ -1.3
PTPRA-202ENST00000318266 MALP21145 153 aa6.93□□□□□ -1.3
PTPRA-202ENST00000318266 C18orf65Q6ZTR6 163 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms