RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 PRADC1Q9BSG0 188 aa5□□□□□ -1.61
NPHP1-201ENST00000316534 ACANP16112 2415 aa5□□□□□ -1.61
NPHP1-201ENST00000316534 HIVEP2P31629 2446 aa5□□□□□ -1.61
NPHP1-201ENST00000316534 Q6ZUT4 128 aa5□□□□□ -1.61
NPHP1-201ENST00000316534 VSIG2Q96IQ7 327 aa5□□□□□ -1.61
NPHP1-201ENST00000316534 LITAFQ99732 161 aa5□□□□□ -1.61
NPHP1-201ENST00000316534 CHAC1Q9BUX1 264 aa5□□□□□ -1.61
NPHP1-201ENST00000316534 BAHCC1Q9P281 2608 aa4.99□□□□□ -1.61
NPHP1-201ENST00000316534 TRBV6-8A0A0A6YYG3 113 aa4.99□□□□□ -1.61
NPHP1-201ENST00000316534 GAGE12BA1L429 117 aa4.99□□□□□ -1.61
NPHP1-201ENST00000316534 GAGE7O76087 117 aa4.99□□□□□ -1.61
NPHP1-201ENST00000316534 GAGE12FP0CL80 117 aa4.99□□□□□ -1.61
NPHP1-201ENST00000316534 GAGE12GP0CL81 117 aa4.99□□□□□ -1.61
NPHP1-201ENST00000316534 GAGE12IP0CL82 117 aa4.99□□□□□ -1.61
NPHP1-201ENST00000316534 CBY1Q9Y3M2 126 aa4.99□□□□□ -1.61
NPHP1-201ENST00000316534 TIMM17BO60830 172 aa4.99□□□□□ -1.61
NPHP1-201ENST00000316534 NMUP48645 174 aa4.99□□□□□ -1.61
NPHP1-201ENST00000316534 CEND1Q8N111 149 aa4.99□□□□□ -1.61
NPHP1-201ENST00000316534 A0A0J9YY99 117 aa4.99□□□□□ -1.61
NPHP1-201ENST00000316534 VCX2Q9H322 139 aa4.99□□□□□ -1.61
NPHP1-201ENST00000316534 PRO0255Q9UI72 69 aa4.99□□□□□ -1.61
NPHP1-201ENST00000316534 TEP1Q99973 2627 aaKnown RBP4.98□□□□□ -1.61
NPHP1-201ENST00000316534 IGHV1-58A0A0C4DH39 117 aa4.98□□□□□ -1.61
NPHP1-201ENST00000316534 EIF4EBP3O60516 100 aaPredicted RBP4.98□□□□□ -1.61
NPHP1-201ENST00000316534 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.98□□□□□ -1.61
NPHP1-201ENST00000316534 A0A1W2PPM0 123 aa4.98□□□□□ -1.61
NPHP1-201ENST00000316534 IGKV2-29A2NJV5 120 aaPredicted RBP4.98□□□□□ -1.61
NPHP1-201ENST00000316534 LINC00242Q5T6M2 205 aa4.98□□□□□ -1.61
NPHP1-201ENST00000316534 LOC100131303A0A0U1RQF7 123 aa4.98□□□□□ -1.61
NPHP1-201ENST00000316534 HERVK_113P61574 105 aa4.98□□□□□ -1.61
NPHP1-201ENST00000316534 FAM222AQ5U5X8 452 aa4.98□□□□□ -1.61
NPHP1-201ENST00000316534 OR11H2Q8NH07 326 aa4.98□□□□□ -1.61
NPHP1-201ENST00000316534 PLEKHB2Q96CS7 222 aa4.98□□□□□ -1.61
NPHP1-201ENST00000316534 SPATA25Q9BR10 227 aa4.98□□□□□ -1.61
NPHP1-201ENST00000316534 A0A0J9YXV3 536 aa4.97□□□□□ -1.61
NPHP1-201ENST00000316534 ZFAND6Q6FIF0 208 aa4.97□□□□□ -1.61
NPHP1-201ENST00000316534 SPANXDQ9BXN6 97 aa4.97□□□□□ -1.61
NPHP1-201ENST00000316534 SPANXCQ9NY87 97 aa4.97□□□□□ -1.61
NPHP1-201ENST00000316534 CELA1Q9UNI1 258 aa4.97□□□□□ -1.61
NPHP1-201ENST00000316534 CEMP1Q6PRD7 247 aaPredicted RBP4.97□□□□□ -1.61
NPHP1-201ENST00000316534 TMEM243Q9BU79 118 aa4.97□□□□□ -1.61
NPHP1-201ENST00000316534 TTTY13Q9BZ97 58 aa4.97□□□□□ -1.61
NPHP1-201ENST00000316534 J3QQQ9 107 aa4.96□□□□□ -1.61
NPHP1-201ENST00000316534 IGHV3-30P01768 117 aa4.96□□□□□ -1.61
NPHP1-201ENST00000316534 IGHV3-30-5P0DP03 117 aa4.96□□□□□ -1.61
NPHP1-201ENST00000316534 TRGV2A0A075B6R0 118 aa4.96□□□□□ -1.62
NPHP1-201ENST00000316534 A0A0J9YXY3 114 aa4.96□□□□□ -1.62
NPHP1-201ENST00000316534 HERVK_113P63121 156 aa4.96□□□□□ -1.62
NPHP1-201ENST00000316534 COX6A2Q02221 97 aa4.96□□□□□ -1.62
NPHP1-201ENST00000316534 SH2D6Q7Z4S9 175 aa4.96□□□□□ -1.62
NPHP1-201ENST00000316534 CCDC168Q8NDH2 2452 aa4.96□□□□□ -1.62
NPHP1-201ENST00000316534 IGHV3-38A0A0C4DH36 116 aa4.96□□□□□ -1.62
NPHP1-201ENST00000316534 GAGE12JA6NER3 117 aa4.96□□□□□ -1.62
NPHP1-201ENST00000316534 GAGE4Q13068 117 aa4.96□□□□□ -1.62
NPHP1-201ENST00000316534 GAGE5Q13069 117 aa4.96□□□□□ -1.62
NPHP1-201ENST00000316534 GAGE13Q4V321 117 aa4.96□□□□□ -1.62
NPHP1-201ENST00000316534 SONP18583 2426 aaKnown RBP4.96□□□□□ -1.62
NPHP1-201ENST00000316534 DNAH6Q9C0G6 4158 aa4.96□□□□□ -1.62
NPHP1-201ENST00000316534 NDUFA1O15239 70 aa4.95□□□□□ -1.62
NPHP1-201ENST00000316534 IGHV3-30-3P0DP02 117 aa4.95□□□□□ -1.62
NPHP1-201ENST00000316534 SCGB1A1P11684 91 aa4.95□□□□□ -1.62
NPHP1-201ENST00000316534 DEFB135Q30KP9 77 aa4.95□□□□□ -1.62
NPHP1-201ENST00000316534 C10orf126Q8N4M7 172 aa4.95□□□□□ -1.62
NPHP1-201ENST00000316534 TM2D3Q9BRN9 247 aa4.95□□□□□ -1.62
NPHP1-201ENST00000316534 TRGV4A0A0C4DH28 118 aa4.95□□□□□ -1.62
NPHP1-201ENST00000316534 FXYD2P54710 66 aa4.95□□□□□ -1.62
NPHP1-201ENST00000316534 ZNF625Q96I27 306 aaPredicted RBP4.95□□□□□ -1.62
NPHP1-201ENST00000316534 PRKDCP78527 4128 aaKnown RBP4.95□□□□□ -1.62
NPHP1-201ENST00000316534 SMIM1B2RUZ4 78 aa4.95□□□□□ -1.62
NPHP1-201ENST00000316534 SPART-AS1P0CW21 52 aa4.95□□□□□ -1.62
NPHP1-201ENST00000316534 ATP6V0E2Q8NHE4 81 aa4.95□□□□□ -1.62
NPHP1-201ENST00000316534 C12orf74Q32Q52 190 aa4.94□□□□□ -1.62
NPHP1-201ENST00000316534 OXLD1Q5BKU9 147 aa4.94□□□□□ -1.62
NPHP1-201ENST00000316534 AMMECR1LQ6DCA0 310 aa4.94□□□□□ -1.62
NPHP1-201ENST00000316534 TLN2Q9Y4G6 2542 aa4.94□□□□□ -1.62
NPHP1-201ENST00000316534 A6NDN8 102 aa4.94□□□□□ -1.62
NPHP1-201ENST00000316534 SMCPP49901 116 aaPredicted RBP4.94□□□□□ -1.62
NPHP1-201ENST00000316534 IGHV3OR16-9A0A0B4J2B5 98 aa4.94□□□□□ -1.62
NPHP1-201ENST00000316534 TMEM101Q96IK0 257 aa4.94□□□□□ -1.62
NPHP1-201ENST00000316534 C2CD3Q4AC94 2353 aa4.94□□□□□ -1.62
NPHP1-201ENST00000316534 ZNF815PA8K554 130 aa4.93□□□□□ -1.62
NPHP1-201ENST00000316534 ATP5G1P05496 136 aa4.93□□□□□ -1.62
NPHP1-201ENST00000316534 PRR34Q9NV39 138 aa4.93□□□□□ -1.62
NPHP1-201ENST00000316534 IGLV4-60A0A075B6I1 120 aa4.93□□□□□ -1.62
NPHP1-201ENST00000316534 A0A096LPF7 62 aa4.93□□□□□ -1.62
NPHP1-201ENST00000316534 GYPEP15421 78 aa4.93□□□□□ -1.62
NPHP1-201ENST00000316534 C3orf56Q8N813 242 aa4.93□□□□□ -1.62
NPHP1-201ENST00000316534 CDKN2A-AS1Q9UH64 79 aa4.93□□□□□ -1.62
NPHP1-201ENST00000316534 A0A087WZ39 114 aa4.92□□□□□ -1.62
NPHP1-201ENST00000316534 LOC107984156A0A0G2JMH3 177 aa4.92□□□□□ -1.62
NPHP1-201ENST00000316534 ARL17AQ8IVW1 177 aa4.92□□□□□ -1.62
NPHP1-201ENST00000316534 DEFB104AQ8WTQ1 72 aa4.92□□□□□ -1.62
NPHP1-201ENST00000316534 MAST4O15021 2626 aa4.92□□□□□ -1.62
NPHP1-201ENST00000316534 TMEM170BQ5T4T1 132 aa4.92□□□□□ -1.62
NPHP1-201ENST00000316534 LELP1Q5T871 98 aa4.92□□□□□ -1.62
NPHP1-201ENST00000316534 IGLL5B9A064 214 aa4.92□□□□□ -1.62
NPHP1-201ENST00000316534 EMP1P54849 157 aa4.92□□□□□ -1.62
NPHP1-201ENST00000316534 A0A0B4J2C4 111 aa4.91□□□□□ -1.62
NPHP1-201ENST00000316534 DAD1P61803 113 aa4.91□□□□□ -1.62
NPHP1-201ENST00000316534 SORL1Q92673 2214 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms