RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 IGHV4-59P01825 116 aa10.63□□□□□ -0.71
COL6A2-202ENST00000310645 PIK3CD-AS1Q5SR53 167 aa10.63□□□□□ -0.71
COL6A2-202ENST00000310645 PSMB8P28062 276 aa10.62□□□□□ -0.71
COL6A2-202ENST00000310645 TMEM126AQ9H061 195 aa10.62□□□□□ -0.71
COL6A2-202ENST00000310645 TIMM17BO60830 172 aa10.62□□□□□ -0.71
COL6A2-202ENST00000310645 ACYP1P07311 99 aa10.62□□□□□ -0.71
COL6A2-202ENST00000310645 IGHV3OR16-12A0A075B7B8 117 aa10.62□□□□□ -0.71
COL6A2-202ENST00000310645 AVPP01185 164 aa10.62□□□□□ -0.71
COL6A2-202ENST00000310645 CFHR3Q02985 330 aa10.62□□□□□ -0.71
COL6A2-202ENST00000310645 LINC00643Q86TS7 51 aa10.62□□□□□ -0.71
COL6A2-202ENST00000310645 PIMREGQ9BSJ6 248 aa10.62□□□□□ -0.71
COL6A2-202ENST00000310645 VPREB3Q9UKI3 123 aa10.62□□□□□ -0.71
COL6A2-202ENST00000310645 FAM218AQ96MZ4 157 aa10.61□□□□□ -0.71
COL6A2-202ENST00000310645 CELSR2Q9HCU4 2923 aa10.61□□□□□ -0.71
COL6A2-202ENST00000310645 CSMD2Q7Z408 3487 aa10.61□□□□□ -0.71
COL6A2-202ENST00000310645 CENPEQ02224 2701 aa10.61□□□□□ -0.71
COL6A2-202ENST00000310645 TIRAPP58753 221 aa10.61□□□□□ -0.71
COL6A2-202ENST00000310645 DEFB136Q30KP8 78 aa10.6□□□□□ -0.71
COL6A2-202ENST00000310645 LOC107984640A0A0U1RRK4 108 aa10.6□□□□□ -0.71
COL6A2-202ENST00000310645 LINC00242Q5T6M2 205 aa10.6□□□□□ -0.71
COL6A2-202ENST00000310645 C3orf22Q8N5N4 141 aa10.6□□□□□ -0.71
COL6A2-202ENST00000310645 ZNF415Q09FC8 603 aa10.59□□□□□ -0.71
COL6A2-202ENST00000310645 USP9XQ93008 2570 aaPredicted RBP10.59□□□□□ -0.71
COL6A2-202ENST00000310645 RBMY1BA6NDE4 496 aaKnown RBP10.59□□□□□ -0.71
COL6A2-202ENST00000310645 RBMY1EA6NEQ0 496 aaKnown RBP10.59□□□□□ -0.71
COL6A2-202ENST00000310645 IGHV3-53P01767 116 aa10.59□□□□□ -0.71
COL6A2-202ENST00000310645 RBMY1DP0C7P1 496 aaKnown RBP10.59□□□□□ -0.71
COL6A2-202ENST00000310645 EDA2RQ9HAV5 297 aa10.59□□□□□ -0.71
COL6A2-202ENST00000310645 IGHV4-30-2A0A087WSY4 118 aa10.58□□□□□ -0.72
COL6A2-202ENST00000310645 LY6DQ14210 128 aa10.58□□□□□ -0.72
COL6A2-202ENST00000310645 IMUPQ9GZP8 106 aa10.58□□□□□ -0.72
COL6A2-202ENST00000310645 HERVK_113P63121 156 aa10.58□□□□□ -0.72
COL6A2-202ENST00000310645 IGKV3OR2-268A0A0C4DH90 116 aa10.57□□□□□ -0.72
COL6A2-202ENST00000310645 ATP5J2P56134 94 aa10.57□□□□□ -0.72
COL6A2-202ENST00000310645 HIST2H2BDQ6DRA6 164 aa10.57□□□□□ -0.72
COL6A2-202ENST00000310645 POLQO75417 2590 aa10.57□□□□□ -0.72
COL6A2-202ENST00000310645 SMIM1B2RUZ4 78 aa10.56□□□□□ -0.72
COL6A2-202ENST00000310645 DEFB112Q30KQ8 113 aa10.56□□□□□ -0.72
COL6A2-202ENST00000310645 MYO18BQ8IUG5 2567 aa10.56□□□□□ -0.72
COL6A2-202ENST00000310645 MSMBP08118 114 aa10.56□□□□□ -0.72
COL6A2-202ENST00000310645 SLURP1P55000 103 aa10.56□□□□□ -0.72
COL6A2-202ENST00000310645 TOMM7Q9P0U1 55 aa10.56□□□□□ -0.72
COL6A2-202ENST00000310645 ZANQ9Y493 2812 aa10.56□□□□□ -0.72
COL6A2-202ENST00000310645 UQCRQO14949 82 aa10.56□□□□□ -0.72
COL6A2-202ENST00000310645 SDIM1Q6ZPB5 146 aa10.56□□□□□ -0.72
COL6A2-202ENST00000310645 TLN2Q9Y4G6 2542 aa10.55□□□□□ -0.72
COL6A2-202ENST00000310645 C18orf65Q6ZTR6 163 aa10.55□□□□□ -0.72
COL6A2-202ENST00000310645 XCL2Q9UBD3 114 aa10.55□□□□□ -0.72
COL6A2-202ENST00000310645 SETD2Q9BYW2 2564 aaPredicted RBP10.55□□□□□ -0.72
COL6A2-202ENST00000310645 IGLV5-45A0A087WSX0 123 aa10.55□□□□□ -0.72
COL6A2-202ENST00000310645 IGKV3D-7A0A0C4DH55 119 aa10.55□□□□□ -0.72
COL6A2-202ENST00000310645 TRACP01848 142 aa10.55□□□□□ -0.72
COL6A2-202ENST00000310645 IGLV5-39A0A0G2JS06 123 aa10.54□□□□□ -0.72
COL6A2-202ENST00000310645 C10orf105Q8TEF2 133 aa10.54□□□□□ -0.72
COL6A2-202ENST00000310645 UBE2E2Q96LR5 201 aa10.54□□□□□ -0.72
COL6A2-202ENST00000310645 CCL19Q99731 98 aa10.54□□□□□ -0.72
COL6A2-202ENST00000310645 KHDC1LQ5JSQ8 128 aa10.54□□□□□ -0.72
COL6A2-202ENST00000310645 C22orf24Q9Y442 160 aa10.54□□□□□ -0.72
COL6A2-202ENST00000310645 BEAN1Q3B7T3 259 aa10.54□□□□□ -0.72
COL6A2-202ENST00000310645 TRGV1A0A0A0MS02 117 aa10.53□□□□□ -0.72
COL6A2-202ENST00000310645 MALP21145 153 aa10.53□□□□□ -0.72
COL6A2-202ENST00000310645 COPS9Q8WXC6 57 aa10.53□□□□□ -0.72
COL6A2-202ENST00000310645 C14orf132Q9NPU4 83 aa10.53□□□□□ -0.72
COL6A2-202ENST00000310645 PEMTQ9UBM1 199 aa10.53□□□□□ -0.72
COL6A2-202ENST00000310645 JMJD1CQ15652 2540 aa10.53□□□□□ -0.72
COL6A2-202ENST00000310645 DNAL4O96015 105 aa10.53□□□□□ -0.72
COL6A2-202ENST00000310645 MAPK1IP1LQ8NDC0 245 aa10.53□□□□□ -0.72
COL6A2-202ENST00000310645 hADV29S1A0JD25 119 aa10.52□□□□□ -0.72
COL6A2-202ENST00000310645 CRPP02741 224 aa10.52□□□□□ -0.72
COL6A2-202ENST00000310645 ATP5G1P05496 136 aa10.52□□□□□ -0.72
COL6A2-202ENST00000310645 LINC00526Q96FQ7 95 aa10.52□□□□□ -0.72
COL6A2-202ENST00000310645 PTPN13Q12923 2485 aa10.52□□□□□ -0.72
COL6A2-202ENST00000310645 INAFM2P0DMQ5 153 aa10.52□□□□□ -0.73
COL6A2-202ENST00000310645 C9orf129Q5T035 196 aaKnown RBP10.52□□□□□ -0.73
COL6A2-202ENST00000310645 DNAJC30Q96LL9 226 aa10.52□□□□□ -0.73
COL6A2-202ENST00000310645 HIST2H2BCQ6DN03 193 aa10.51□□□□□ -0.73
COL6A2-202ENST00000310645 MIR7-3HGQ8N6C7 128 aa10.51□□□□□ -0.73
COL6A2-202ENST00000310645 C11orf72Q8NBR9 251 aa10.51□□□□□ -0.73
COL6A2-202ENST00000310645 TMEM89A2RUT3 159 aa10.5□□□□□ -0.73
COL6A2-202ENST00000310645 COX7CP15954 63 aa10.5□□□□□ -0.73
COL6A2-202ENST00000310645 LINC00158P58513 81 aa10.5□□□□□ -0.73
COL6A2-202ENST00000310645 LINC00337Q8N6G1 96 aa10.5□□□□□ -0.73
COL6A2-202ENST00000310645 Q96MF0 132 aa10.5□□□□□ -0.73
COL6A2-202ENST00000310645 A0A087WYN8 130 aa10.49□□□□□ -0.73
COL6A2-202ENST00000310645 C5orf38Q86SI9 138 aa10.49□□□□□ -0.73
COL6A2-202ENST00000310645 SND1-IT1Q9HBX3 110 aa10.49□□□□□ -0.73
COL6A2-202ENST00000310645 A0A087WVE0 104 aa10.49□□□□□ -0.73
COL6A2-202ENST00000310645 UCNP55089 124 aa10.49□□□□□ -0.73
COL6A2-202ENST00000310645 NTM-AS1Q6ZSK4 140 aa10.49□□□□□ -0.73
COL6A2-202ENST00000310645 GNLYP22749 145 aa10.48□□□□□ -0.73
COL6A2-202ENST00000310645 RPL36AP83881 106 aaKnown RBP10.48□□□□□ -0.73
COL6A2-202ENST00000310645 NRGNQ92686 78 aa10.48□□□□□ -0.73
COL6A2-202ENST00000310645 RPL36ALQ969Q0 106 aaKnown RBP10.48□□□□□ -0.73
COL6A2-202ENST00000310645 NBL1P41271 181 aa10.48□□□□□ -0.73
COL6A2-202ENST00000310645 OR13C6PQ8NH95 151 aa10.48□□□□□ -0.73
COL6A2-202ENST00000310645 A0A1B0GX51 115 aa10.48□□□□□ -0.73
COL6A2-202ENST00000310645 SLPIP03973 132 aa10.48□□□□□ -0.73
COL6A2-202ENST00000310645 DYNLRB2Q8TF09 96 aa10.48□□□□□ -0.73
COL6A2-202ENST00000310645 ITPR1Q14643 2758 aa10.47□□□□□ -0.73
COL6A2-202ENST00000310645 TRAV13-2A0A0B4J235 113 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms