RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 LOC100131303A0A0U1RQF7 123 aa12.01□□□□□ -0.49
BRD3-201ENST00000303407 IBA57-AS1B1ANH7 110 aa12□□□□□ -0.49
BRD3-201ENST00000303407 NDUFS5O43920 106 aa12□□□□□ -0.49
BRD3-201ENST00000303407 BBC3Q96PG8 261 aaPredicted RBP12□□□□□ -0.49
BRD3-201ENST00000303407 OTOGLQ3ZCN5 2332 aa12□□□□□ -0.49
BRD3-201ENST00000303407 TRBV30A0A0K0K1B3 111 aa12□□□□□ -0.49
BRD3-201ENST00000303407 NDUFC2O95298 119 aa11.99□□□□□ -0.49
BRD3-201ENST00000303407 MIFP14174 115 aa11.99□□□□□ -0.49
BRD3-201ENST00000303407 FAM110AQ9BQ89 295 aa11.99□□□□□ -0.49
BRD3-201ENST00000303407 UBE2AP49459 152 aa11.99□□□□□ -0.49
BRD3-201ENST00000303407 MRGPRG-AS1Q2M3A8 158 aa11.99□□□□□ -0.49
BRD3-201ENST00000303407 NACAE9PAV3 2078 aa11.98□□□□□ -0.49
BRD3-201ENST00000303407 MT-ATP8P03928 68 aa11.97□□□□□ -0.49
BRD3-201ENST00000303407 UBE2D1P51668 147 aa11.97□□□□□ -0.49
BRD3-201ENST00000303407 EML5Q05BV3 1969 aa11.96□□□□□ -0.49
BRD3-201ENST00000303407 TIMM17BO60830 172 aa11.96□□□□□ -0.49
BRD3-201ENST00000303407 MRPS36P82909 103 aaKnown RBP11.96□□□□□ -0.49
BRD3-201ENST00000303407 DEFB131BA0A096LNP1 70 aa11.96□□□□□ -0.5
BRD3-201ENST00000303407 SLPIP03973 132 aa11.96□□□□□ -0.5
BRD3-201ENST00000303407 LINC00643Q86TS7 51 aa11.95□□□□□ -0.5
BRD3-201ENST00000303407 KLK5Q9Y337 293 aaPredicted RBP11.95□□□□□ -0.5
BRD3-201ENST00000303407 IGIPA6NJ69 53 aa11.95□□□□□ -0.5
BRD3-201ENST00000303407 HILS1P60008 231 aa11.95□□□□□ -0.5
BRD3-201ENST00000303407 DOPEY2Q9Y3R5 2298 aa11.95□□□□□ -0.5
BRD3-201ENST00000303407 KRTAP10-9P60411 292 aa11.95□□□□□ -0.5
BRD3-201ENST00000303407 NOTCH3Q9UM47 2321 aa11.95□□□□□ -0.5
BRD3-201ENST00000303407 C5orf47Q569G3 176 aa11.95□□□□□ -0.5
BRD3-201ENST00000303407 CREBBPQ92793 2442 aa11.95□□□□□ -0.5
BRD3-201ENST00000303407 COX8CQ7Z4L0 72 aa11.94□□□□□ -0.5
BRD3-201ENST00000303407 PLXNB1O43157 2135 aa11.94□□□□□ -0.5
BRD3-201ENST00000303407 FAM208BQ5VWN6 2430 aa11.94□□□□□ -0.5
BRD3-201ENST00000303407 RBX1P62877 108 aa11.93□□□□□ -0.5
BRD3-201ENST00000303407 PDE6GP18545 87 aa11.92□□□□□ -0.5
BRD3-201ENST00000303407 UBE2D3P61077 147 aa11.91□□□□□ -0.5
BRD3-201ENST00000303407 UBE2D2P62837 147 aa11.91□□□□□ -0.5
BRD3-201ENST00000303407 LINC00959A0A1B0GUT2 108 aa11.91□□□□□ -0.5
BRD3-201ENST00000303407 BRI3O95415 125 aa11.91□□□□□ -0.5
BRD3-201ENST00000303407 SMIM20Q8N5G0 67 aa11.91□□□□□ -0.5
BRD3-201ENST00000303407 IGKV2-24A0A0C4DH68 120 aa11.9□□□□□ -0.5
BRD3-201ENST00000303407 IGLV4-69A0A075B6H9 119 aa11.9□□□□□ -0.5
BRD3-201ENST00000303407 ODF3L2Q3SX64 289 aa11.9□□□□□ -0.5
BRD3-201ENST00000303407 CD164L2Q6UWJ8 174 aa11.89□□□□□ -0.51
BRD3-201ENST00000303407 PLA2G2AP14555 144 aa11.89□□□□□ -0.51
BRD3-201ENST00000303407 SPATA25Q9BR10 227 aa11.89□□□□□ -0.51
BRD3-201ENST00000303407 XAGE1AQ9HD64 81 aa11.89□□□□□ -0.51
BRD3-201ENST00000303407 UPK3BQ9BT76 320 aa11.88□□□□□ -0.51
BRD3-201ENST00000303407 SHISA2Q6UWI4 295 aa11.88□□□□□ -0.51
BRD3-201ENST00000303407 SDIM1Q6ZPB5 146 aa11.88□□□□□ -0.51
BRD3-201ENST00000303407 CDC42SE2Q9NRR3 84 aa11.88□□□□□ -0.51
BRD3-201ENST00000303407 ARHGAP32A7KAX9 2087 aa11.88□□□□□ -0.51
BRD3-201ENST00000303407 NDUFB1O75438 58 aa11.88□□□□□ -0.51
BRD3-201ENST00000303407 PTPRQQ9UMZ3 2332 aa11.87□□□□□ -0.51
BRD3-201ENST00000303407 NDUFV3P56181 108 aaKnown RBP11.87□□□□□ -0.51
BRD3-201ENST00000303407 A0A096LNJ9 63 aa11.87□□□□□ -0.51
BRD3-201ENST00000303407 RNF183Q96D59 192 aa11.87□□□□□ -0.51
BRD3-201ENST00000303407 BDP1A6H8Y1 2624 aa11.87□□□□□ -0.51
BRD3-201ENST00000303407 POM121L12Q8N7R1 296 aa11.86□□□□□ -0.51
BRD3-201ENST00000303407 CLUHP3Q96NS8 147 aa11.86□□□□□ -0.51
BRD3-201ENST00000303407 C14orf177Q52M58 125 aa11.86□□□□□ -0.51
BRD3-201ENST00000303407 CHCHD7Q9BUK0 85 aa11.86□□□□□ -0.51
BRD3-201ENST00000303407 KIR2DL5BQ8NHK3 375 aa11.86□□□□□ -0.51
BRD3-201ENST00000303407 J3KT08 172 aa11.85□□□□□ -0.51
BRD3-201ENST00000303407 SMR3AQ99954 134 aa11.85□□□□□ -0.51
BRD3-201ENST00000303407 TRAV23DV6A0A075B6W5 121 aa11.85□□□□□ -0.51
BRD3-201ENST00000303407 NDUFA7O95182 113 aa11.85□□□□□ -0.51
BRD3-201ENST00000303407 C6orf99Q4VX62 202 aa11.85□□□□□ -0.51
BRD3-201ENST00000303407 LELP1Q5T871 98 aa11.85□□□□□ -0.51
BRD3-201ENST00000303407 LINC00526Q96FQ7 95 aa11.85□□□□□ -0.51
BRD3-201ENST00000303407 ZNF580Q9UK33 172 aa11.85□□□□□ -0.51
BRD3-201ENST00000303407 B9D2Q9BPU9 175 aa11.85□□□□□ -0.51
BRD3-201ENST00000303407 LST1O00453 97 aa11.84□□□□□ -0.51
BRD3-201ENST00000303407 IGLV2-18A0A075B6J9 118 aa11.84□□□□□ -0.51
BRD3-201ENST00000303407 MP68P56378 58 aa11.84□□□□□ -0.51
BRD3-201ENST00000303407 DSCAML1Q8TD84 2053 aa11.84□□□□□ -0.51
BRD3-201ENST00000303407 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.83□□□□□ -0.52
BRD3-201ENST00000303407 KPRPQ5T749 579 aaPredicted RBP11.83□□□□□ -0.52
BRD3-201ENST00000303407 SMIM11BQ8TCY0 68 aa11.83□□□□□ -0.52
BRD3-201ENST00000303407 TSPEAR-AS2P59090 65 aa11.83□□□□□ -0.52
BRD3-201ENST00000303407 LINC00242Q5T6M2 205 aa11.83□□□□□ -0.52
BRD3-201ENST00000303407 FAM19A5Q7Z5A7 132 aaPredicted RBP11.82□□□□□ -0.52
BRD3-201ENST00000303407 SYCNQ0VAF6 134 aa11.82□□□□□ -0.52
BRD3-201ENST00000303407 HIGD2AQ9BW72 106 aa11.81□□□□□ -0.52
BRD3-201ENST00000303407 COX6A2Q02221 97 aa11.81□□□□□ -0.52
BRD3-201ENST00000303407 C1orf158Q8N1D5 194 aa11.81□□□□□ -0.52
BRD3-201ENST00000303407 SVIPQ8NHG7 77 aa11.81□□□□□ -0.52
BRD3-201ENST00000303407 TRAV10A0A0B4J240 114 aa11.8□□□□□ -0.52
BRD3-201ENST00000303407 FAM19A1Q7Z5A9 133 aa11.8□□□□□ -0.52
BRD3-201ENST00000303407 BPY2O14599 106 aa11.8□□□□□ -0.52
BRD3-201ENST00000303407 IGLV1-51P01701 117 aa11.8□□□□□ -0.52
BRD3-201ENST00000303407 WFDC9Q8NEX5 89 aa11.8□□□□□ -0.52
BRD3-201ENST00000303407 ENHOQ6UWT2 76 aa11.79□□□□□ -0.52
BRD3-201ENST00000303407 PRB2P02812 416 aaPredicted RBP11.79□□□□□ -0.52
BRD3-201ENST00000303407 IL17DQ8TAD2 202 aa11.79□□□□□ -0.52
BRD3-201ENST00000303407 Q8IZM0 81 aa11.79□□□□□ -0.52
BRD3-201ENST00000303407 COX17Q14061 63 aa11.78□□□□□ -0.52
BRD3-201ENST00000303407 CHKB-CPT1BH3BT56 60 aa11.78□□□□□ -0.52
BRD3-201ENST00000303407 SCXQ7RTU7 201 aa11.78□□□□□ -0.52
BRD3-201ENST00000303407 LINC00694P0DN24 101 aa11.78□□□□□ -0.52
BRD3-201ENST00000303407 Q6ZSN1 163 aa11.78□□□□□ -0.52
BRD3-201ENST00000303407 NAV3Q8IVL0 2385 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms