RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 C1QTNF4Q9BXJ3 329 aa18.05■□□□□ 0.48
ROM1-201ENST00000278833 C16orf95Q9H693 158 aa18.05■□□□□ 0.48
ROM1-201ENST00000278833 TRBV10-1A0A0K0K1A3 114 aa18.04■□□□□ 0.48
ROM1-201ENST00000278833 IGHV3-33P01772 117 aa18.04■□□□□ 0.48
ROM1-201ENST00000278833 M0QXV9 152 aa18.03■□□□□ 0.48
ROM1-201ENST00000278833 C2CD3Q4AC94 2353 aa18.03■□□□□ 0.48
ROM1-201ENST00000278833 CEMP1Q6PRD7 247 aaPredicted RBP18.03■□□□□ 0.48
ROM1-201ENST00000278833 Q6ZUT4 128 aa18.03■□□□□ 0.48
ROM1-201ENST00000278833 FAM19A3Q7Z5A8 133 aa18.03■□□□□ 0.48
ROM1-201ENST00000278833 FAM110AQ9BQ89 295 aa18.03■□□□□ 0.48
ROM1-201ENST00000278833 EIF4EBP3O60516 100 aaPredicted RBP18.03■□□□□ 0.48
ROM1-201ENST00000278833 PSMB2P49721 201 aa18.03■□□□□ 0.48
ROM1-201ENST00000278833 MUSTN1Q8IVN3 82 aa18.03■□□□□ 0.48
ROM1-201ENST00000278833 RNF183Q96D59 192 aa18.03■□□□□ 0.48
ROM1-201ENST00000278833 ESM1Q9NQ30 184 aa18.03■□□□□ 0.48
ROM1-201ENST00000278833 IGHV3-64A0A075B6Q5 118 aa18.02■□□□□ 0.48
ROM1-201ENST00000278833 TIMM17BO60830 172 aa18.02■□□□□ 0.48
ROM1-201ENST00000278833 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.01■□□□□ 0.47
ROM1-201ENST00000278833 IGKV2-29A2NJV5 120 aaPredicted RBP18.01■□□□□ 0.47
ROM1-201ENST00000278833 TCL1BO95988 128 aa18.01■□□□□ 0.47
ROM1-201ENST00000278833 AZU1P20160 251 aa18.01■□□□□ 0.47
ROM1-201ENST00000278833 ZFAND6Q6FIF0 208 aa18.01■□□□□ 0.47
ROM1-201ENST00000278833 XCL2Q9UBD3 114 aa18.01■□□□□ 0.47
ROM1-201ENST00000278833 TSSC4Q9Y5U2 329 aaPredicted RBP18.01■□□□□ 0.47
ROM1-201ENST00000278833 CSDC2Q9Y534 153 aaKnown RBP18■□□□□ 0.47
ROM1-201ENST00000278833 NDUFA12Q9UI09 145 aa17.99■□□□□ 0.47
ROM1-201ENST00000278833 TRAV4A0A0B4J268 109 aa17.99■□□□□ 0.47
ROM1-201ENST00000278833 SCGB1A1P11684 91 aa17.99■□□□□ 0.47
ROM1-201ENST00000278833 TRAV8-3A0A0A6YYJ7 113 aa17.98■□□□□ 0.47
ROM1-201ENST00000278833 RNASE1P07998 156 aaKnown RBP17.98■□□□□ 0.47
ROM1-201ENST00000278833 MTURNQ8N3F0 131 aa17.98■□□□□ 0.47
ROM1-201ENST00000278833 ERG28Q9UKR5 140 aa17.98■□□□□ 0.47
ROM1-201ENST00000278833 GAGE12HA6NDE8 117 aa17.97■□□□□ 0.47
ROM1-201ENST00000278833 FOXI1Q12951 378 aa17.97■□□□□ 0.47
ROM1-201ENST00000278833 MIAQ16674 131 aa17.97■□□□□ 0.47
ROM1-201ENST00000278833 LINC01600Q96MT4 127 aa17.97■□□□□ 0.47
ROM1-201ENST00000278833 K7EQD1 137 aa17.96■□□□□ 0.47
ROM1-201ENST00000278833 DAZ2Q13117 558 aaKnown RBP17.96■□□□□ 0.47
ROM1-201ENST00000278833 DAZ4Q86SG3 579 aaKnown RBP17.96■□□□□ 0.47
ROM1-201ENST00000278833 PRIMA1Q86XR5 153 aa17.96■□□□□ 0.47
ROM1-201ENST00000278833 ZNF418Q8TF45 676 aaPredicted RBP17.96■□□□□ 0.47
ROM1-201ENST00000278833 GEMIN7Q9H840 131 aaKnown RBP17.96■□□□□ 0.47
ROM1-201ENST00000278833 DAZ3Q9NR90 486 aaKnown RBP17.96■□□□□ 0.47
ROM1-201ENST00000278833 RNASE13Q5GAN3 156 aaKnown RBP17.95■□□□□ 0.46
ROM1-201ENST00000278833 ATRQ13535 2644 aa17.95■□□□□ 0.46
ROM1-201ENST00000278833 IGHV3-38A0A0C4DH36 116 aa17.95■□□□□ 0.46
ROM1-201ENST00000278833 CIDEAO60543 219 aa17.95■□□□□ 0.46
ROM1-201ENST00000278833 RPL36AP83881 106 aaKnown RBP17.95■□□□□ 0.46
ROM1-201ENST00000278833 SMAGPQ0VAQ4 97 aa17.95■□□□□ 0.46
ROM1-201ENST00000278833 TEN1Q86WV5 123 aa17.95■□□□□ 0.46
ROM1-201ENST00000278833 RPL36ALQ969Q0 106 aaKnown RBP17.95■□□□□ 0.46
ROM1-201ENST00000278833 TRGV1A0A0A0MS02 117 aa17.94■□□□□ 0.46
ROM1-201ENST00000278833 CITED2Q99967 270 aaPredicted RBP17.94■□□□□ 0.46
ROM1-201ENST00000278833 NDUFA1O15239 70 aa17.93■□□□□ 0.46
ROM1-201ENST00000278833 SIGMAR1Q99720 223 aa17.93■□□□□ 0.46
ROM1-201ENST00000278833 TRBV30A0A0K0K1B3 111 aa17.92■□□□□ 0.46
ROM1-201ENST00000278833 IFITM1P13164 125 aa17.92■□□□□ 0.46
ROM1-201ENST00000278833 HILS1P60008 231 aa17.92■□□□□ 0.46
ROM1-201ENST00000278833 HERVK_113P63121 156 aa17.92■□□□□ 0.46
ROM1-201ENST00000278833 IGLV5-39A0A0G2JS06 123 aa17.92■□□□□ 0.46
ROM1-201ENST00000278833 SPINK8P0C7L1 97 aa17.92■□□□□ 0.46
ROM1-201ENST00000278833 HIST2H2BDQ6DRA6 164 aa17.92■□□□□ 0.46
ROM1-201ENST00000278833 SFTA2Q6UW10 78 aa17.92■□□□□ 0.46
ROM1-201ENST00000278833 LINC01006Q8NI28 216 aa17.92■□□□□ 0.46
ROM1-201ENST00000278833 PPDPFLQ8WWR9 84 aa17.92■□□□□ 0.46
ROM1-201ENST00000278833 IGHV3OR16-12A0A075B7B8 117 aa17.91■□□□□ 0.46
ROM1-201ENST00000278833 A0A1W2PRX2 142 aa17.91■□□□□ 0.46
ROM1-201ENST00000278833 SCGB1C2P0DMR2 95 aa17.9■□□□□ 0.46
ROM1-201ENST00000278833 C16orf74Q96GX8 76 aa17.9■□□□□ 0.46
ROM1-201ENST00000278833 IGLV1-51P01701 117 aa17.9■□□□□ 0.46
ROM1-201ENST00000278833 GIG44P09565 113 aaPredicted RBP17.9■□□□□ 0.46
ROM1-201ENST00000278833 INSL3P51460 131 aa17.9■□□□□ 0.46
ROM1-201ENST00000278833 DGAT2L7PQ6IED9 249 aa17.9■□□□□ 0.46
ROM1-201ENST00000278833 CDKN2A-AS1Q9UH64 79 aa17.9■□□□□ 0.46
ROM1-201ENST00000278833 GTSF1LQ9H1H1 148 aa17.89■□□□□ 0.45
ROM1-201ENST00000278833 ADARB2-AS1A8MUL3 147 aa17.88■□□□□ 0.45
ROM1-201ENST00000278833 ADAMTSL4-AS1Q5T5F5 129 aa17.88■□□□□ 0.45
ROM1-201ENST00000278833 Q6ZTI0 123 aa17.88■□□□□ 0.45
ROM1-201ENST00000278833 C19orf73Q9NVV2 129 aa17.88■□□□□ 0.45
ROM1-201ENST00000278833 PLAC8L1A1L4L8 177 aa17.87■□□□□ 0.45
ROM1-201ENST00000278833 TMEM101Q96IK0 257 aa17.87■□□□□ 0.45
ROM1-201ENST00000278833 LINC00242Q5T6M2 205 aa17.86■□□□□ 0.45
ROM1-201ENST00000278833 C11orf44Q8N8P7 122 aa17.86■□□□□ 0.45
ROM1-201ENST00000278833 NTM-AS1Q6ZSK4 140 aa17.86■□□□□ 0.45
ROM1-201ENST00000278833 OVOL2Q9BRP0 275 aa17.86■□□□□ 0.45
ROM1-201ENST00000278833 FBN1P35555 2871 aaKnown RBP17.86■□□□□ 0.45
ROM1-201ENST00000278833 H7C423 109 aa17.85■□□□□ 0.45
ROM1-201ENST00000278833 ATXN8Q156A1 80 aa17.85■□□□□ 0.45
ROM1-201ENST00000278833 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.85■□□□□ 0.45
ROM1-201ENST00000278833 PPDPFQ9H3Y8 114 aa17.85■□□□□ 0.45
ROM1-201ENST00000278833 NDUFA7O95182 113 aa17.84■□□□□ 0.45
ROM1-201ENST00000278833 CARD19Q96LW7 228 aa17.84■□□□□ 0.45
ROM1-201ENST00000278833 SLC25A20O43772 301 aa17.83■□□□□ 0.44
ROM1-201ENST00000278833 LINC00694P0DN24 101 aa17.83■□□□□ 0.44
ROM1-201ENST00000278833 TRBV6-4A0A1B0GX49 114 aa17.82■□□□□ 0.44
ROM1-201ENST00000278833 A8MZ25 164 aa17.82■□□□□ 0.44
ROM1-201ENST00000278833 COX6A2Q02221 97 aa17.82■□□□□ 0.44
ROM1-201ENST00000278833 CSNK1G2-AS1Q8NCQ2 148 aa17.82■□□□□ 0.44
ROM1-201ENST00000278833 CDC42SE2Q9NRR3 84 aa17.82■□□□□ 0.44
ROM1-201ENST00000278833 Q1RN00 199 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms