RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 P01812 117 aa11.36□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Ypel3P61237 119 aa11.36□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Serf2P84102 59 aa11.36□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Gm1673Q3UR78 90 aa11.36□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Olfr823Q7TRH2 315 aa11.36□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Q8C4X7 151 aa11.36□□□□□ -0.59
Ercc1-201ENSMUST00000003645 AspaQ8R3P0 312 aa11.36□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Olfr824Q8VFU4 315 aa11.36□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Ube2e2Q91W82 201 aa11.36□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Iglv1A0A075B663 117 aa11.35□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Gm28171A0A087WQ19 227 aa11.35□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Trav13n-4A0A0G2JG01 110 aa11.35□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Gm14412A2ARR7 526 aa11.35□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Tcte2E9PY37 120 aa11.35□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Hoxd3P09027 433 aa11.35□□□□□ -0.59
Ercc1-201ENSMUST00000003645 SelenotP62342 195 aa11.35□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Gm10803Q3TZS6 135 aa11.35□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Psg25Q497W1 475 aa11.35□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Psg27Q497W2 474 aa11.35□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Olfr275Q7TS18 319 aa11.35□□□□□ -0.59
Ercc1-201ENSMUST00000003645 H2-M10.6Q85ZW5 330 aa11.35□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Spock3Q8BKV0 436 aa11.35□□□□□ -0.59
Ercc1-201ENSMUST00000003645 BC049762Q8C601 163 aa11.35□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Vmn1r211Q8R266 298 aa11.35□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Vmn1r226Q8R2A8 298 aa11.35□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Slc31a2Q9CPU9 143 aa11.35□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Arpc5lQ9D898 153 aa11.35□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Trbv5A0A0B4J1G9 113 aa11.34□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Vmn1r194J3JS27 296 aa11.34□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Gm3633L7N233 213 aa11.34□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Gm9611L7N476 213 aa11.34□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Pfdn2O70591 154 aa11.34□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Gnb4P29387 340 aa11.34□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Pilrb2Q2YFS1 225 aa11.34□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Sft2d1Q5SSN7 159 aa11.34□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Mapk1ip1lQ8BH93 242 aa11.34□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Gm9945Q8BNZ3 91 aa11.34□□□□□ -0.59
Ercc1-201ENSMUST00000003645 9030612E09RikQ8CE20 140 aa11.34□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Kcnip2Q9JJ69 270 aa11.34□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Try5Q9QUK9 246 aa11.34□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Try4Q9R0T7 246 aa11.34□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Zfp462B1AWL2 2495 aaKnown RBP11.34□□□□□ -0.59
Ercc1-201ENSMUST00000003645 Igkv4-90A0A075B5L3 117 aa11.33□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Ighv9-4A0A0A6YWH6 117 aa11.33□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Gm15140A2BEE3 237 aa11.33□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Olfr872E9PVW2 323 aa11.33□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Ebi3O35228 228 aa11.33□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Rnase1P00683 149 aa11.33□□□□□ -0.6
Ercc1-201ENSMUST00000003645 IfngP01580 155 aa11.33□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Plp1P60202 277 aa11.33□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Il31Q6EAL8 163 aa11.33□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Olfr1535Q7TQU0 326 aa11.33□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Tmem177Q8BPE4 311 aa11.33□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Olfr223Q8VF69 319 aa11.33□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Arpc5Q9CPW4 151 aa11.33□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Gins1Q9CZ15 196 aa11.33□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Necap2Q9D1J1 266 aa11.33□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Gm45783A0A1B0GT48 74 aa11.32□□□□□ -0.6
Ercc1-201ENSMUST00000003645 A630076J17RikJ3QQ32 107 aa11.32□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Zfp970Q08BU3 522 aa11.32□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Cd200r4Q6XJV4 270 aa11.32□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Med6Q921D4 246 aaKnown RBP11.32□□□□□ -0.6
Ercc1-201ENSMUST00000003645 SNORCQ9CXL7 121 aa11.32□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Srp19Q9D7A6 144 aa11.32□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Trav4-4-dv10A0A075B651 110 aa11.31□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Ighv14-4A0A0A6YVR1 117 aa11.31□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Socs3O35718 225 aa11.31□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Rab5cP35278 216 aa11.31□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Id3P41133 119 aa11.31□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Rnase9P60154 184 aa11.31□□□□□ -0.6
Ercc1-201ENSMUST00000003645 PkiaP63248 76 aa11.31□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Rhox4fQ2MDF8 205 aa11.31□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Rhox4cQ2MDG1 205 aa11.31□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Onecut2Q6XBJ3 505 aa11.31□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Olfr263Q7TQT8 317 aa11.31□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Tmem41bQ8K1A5 291 aa11.31□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Olfr1294Q8VGE5 312 aa11.31□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Nkg7Q99PA5 165 aa11.31□□□□□ -0.6
Ercc1-201ENSMUST00000003645 TecrQ9CY27 308 aa11.31□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Rhox4aQ9D3I8 205 aa11.31□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Tbx21Q9JKD8 530 aa11.31□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Arl3Q9WUL7 182 aa11.31□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Supt4h1bQ9Z199 117 aa11.31□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Muc4Q8JZM8 3443 aa11.31□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Gm21775J3KMK6 180 aa11.3□□□□□ -0.6
Ercc1-201ENSMUST00000003645 P01915 264 aa11.3□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Rab2aP53994 212 aa11.3□□□□□ -0.6
Ercc1-201ENSMUST00000003645 SrstQ06666 185 aa11.3□□□□□ -0.6
Ercc1-201ENSMUST00000003645 H2-DMb2Q31099 261 aa11.3□□□□□ -0.6
Ercc1-201ENSMUST00000003645 RprmlQ3URD2 117 aa11.3□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Gls2Q571F8 602 aa11.3□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Adat3Q6PAT0 349 aa11.3□□□□□ -0.6
Ercc1-201ENSMUST00000003645 AtraidQ6PGD0 223 aa11.3□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Dppa1Q810Y7 116 aa11.3□□□□□ -0.6
Ercc1-201ENSMUST00000003645 B430305J03RikQ8BQQ8 176 aa11.3□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Sft2d2Q8VD57 159 aa11.3□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Olfr127Q8VF25 323 aa11.3□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Pth2Q91W27 100 aa11.3□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Eif2b2Q99LD9 351 aa11.3□□□□□ -0.6
Ercc1-201ENSMUST00000003645 Ms4a4cQ9D3F6 226 aa11.3□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 51 ms