RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeastyeast

Gene RET3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RET3YPL010W UTP8P53276 713 aaKnown RBP4.43□□□□□ -1.7
RET3YPL010W RET3P53600 189 aa4.43□□□□□ -1.7
RET3YPL010W YKR011CQ02209 353 aa4.43□□□□□ -1.7
RET3YPL010W YOR022CQ12204 715 aa4.43□□□□□ -1.7
RET3YPL010W CEX1Q12453 761 aa4.43□□□□□ -1.7
RET3YPL010W FMP27Q06179 2628 aa4.42□□□□□ -1.7
RET3YPL010W HAP2P06774 265 aa4.42□□□□□ -1.7
RET3YPL010W TUB3P09734 445 aaKnown RBP4.42□□□□□ -1.7
RET3YPL010W TCP1P12612 559 aaKnown RBP4.42□□□□□ -1.7
RET3YPL010W IRA2P19158 3079 aa4.42□□□□□ -1.7
RET3YPL010W GSY1P23337 708 aa4.42□□□□□ -1.7
RET3YPL010W PEX1P24004 1043 aa4.42□□□□□ -1.7
RET3YPL010W SGF29P25554 259 aa4.42□□□□□ -1.7
RET3YPL010W TYE7P33122 291 aaPredicted RBP4.42□□□□□ -1.7
RET3YPL010W REC104P33323 182 aa4.42□□□□□ -1.7
RET3YPL010W COY1P34237 679 aa4.42□□□□□ -1.7
RET3YPL010W GCS1P35197 352 aa4.42□□□□□ -1.7
RET3YPL010W MRX3P38172 270 aa4.42□□□□□ -1.7
RET3YPL010W GAA1P39012 614 aa4.42□□□□□ -1.7
RET3YPL010W VAC8P39968 578 aa4.42□□□□□ -1.7
RET3YPL010W STU2P46675 888 aa4.42□□□□□ -1.7
RET3YPL010W STB4P50104 949 aa4.42□□□□□ -1.7
RET3YPL010W DIP5P53388 608 aa4.42□□□□□ -1.7
RET3YPL010W TIM44Q01852 431 aa4.42□□□□□ -1.7
RET3YPL010W TDA5Q06417 326 aaKnown RBP4.42□□□□□ -1.7
RET3YPL010W NSE1Q07913 336 aa4.42□□□□□ -1.7
RET3YPL010W DNL4Q08387 944 aaPredicted RBP4.42□□□□□ -1.7
RET3YPL010W UBR2Q07963 1872 aa4.41□□□□□ -1.7
RET3YPL010W ADE4P04046 510 aaKnown RBP4.41□□□□□ -1.7
RET3YPL010W SRD1P09007 221 aa4.41□□□□□ -1.7
RET3YPL010W MAS1P10507 462 aa4.41□□□□□ -1.7
RET3YPL010W HOM2P13663 365 aaKnown RBP4.41□□□□□ -1.7
RET3YPL010W THR4P16120 514 aaKnown RBP4.41□□□□□ -1.7
RET3YPL010W GLN3P18494 730 aa4.41□□□□□ -1.7
RET3YPL010W RFA1P22336 621 aaKnown RBP4.41□□□□□ -1.7
RET3YPL010W CDC11P32458 415 aa4.41□□□□□ -1.7
RET3YPL010W YBR184WP38299 523 aa4.41□□□□□ -1.7
RET3YPL010W YIL108WP40483 696 aaKnown RBP4.41□□□□□ -1.7
RET3YPL010W ARP5P53946 755 aa4.41□□□□□ -1.7
RET3YPL010W LEE1Q02799 301 aaKnown RBP4.41□□□□□ -1.7
RET3YPL010W NSE5Q03718 556 aa4.41□□□□□ -1.7
RET3YPL010W YLH47Q06493 454 aa4.41□□□□□ -1.7
RET3YPL010W FMP25Q08023 583 aa4.41□□□□□ -1.7
RET3YPL010W SLK19Q08581 821 aaKnown RBP4.41□□□□□ -1.7
RET3YPL010W PLP2Q12017 286 aa4.41□□□□□ -1.7
RET3YPL010W SWM1Q12379 170 aa4.41□□□□□ -1.7
RET3YPL010W TRM13Q12383 476 aa4.41□□□□□ -1.7
RET3YPL010W SEN1Q00416 2231 aaKnown RBP4.4□□□□□ -1.7
RET3YPL010W CUP1-1P0CX80 61 aa4.4□□□□□ -1.71
RET3YPL010W CUP1-2P0CX81 61 aa4.4□□□□□ -1.71
RET3YPL010W HCA4P20448 770 aaKnown RBP4.4□□□□□ -1.71
RET3YPL010W SWI4P25302 1093 aaKnown RBP4.4□□□□□ -1.71
RET3YPL010W PGS1P25578 521 aa4.4□□□□□ -1.71
RET3YPL010W PEX34P25584 144 aa4.4□□□□□ -1.71
RET3YPL010W URA1P28272 314 aaPredicted RBP4.4□□□□□ -1.71
RET3YPL010W RPD3P32561 433 aa4.4□□□□□ -1.71
RET3YPL010W COT1P32798 439 aa4.4□□□□□ -1.71
RET3YPL010W HEL1P36113 551 aa4.4□□□□□ -1.71
RET3YPL010W HMT1P38074 348 aa4.4□□□□□ -1.71
RET3YPL010W BRN1P38170 754 aa4.4□□□□□ -1.71
RET3YPL010W PCM1P38628 557 aaKnown RBP4.4□□□□□ -1.71
RET3YPL010W RTT102P53330 157 aa4.4□□□□□ -1.71
RET3YPL010W YML122CQ03207 126 aa4.4□□□□□ -1.71
RET3YPL010W SMC6Q12749 1114 aa4.4□□□□□ -1.71
RET3YPL010W MEX67Q99257 599 aaKnown RBP4.4□□□□□ -1.71
RET3YPL010W MET3P08536 511 aa4.39□□□□□ -1.71
RET3YPL010W PRP22P24384 1145 aaKnown RBP4.39□□□□□ -1.71
RET3YPL010W PEX2P32800 271 aa4.39□□□□□ -1.71
RET3YPL010W JSN1P47135 1091 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
RET3YPL010W SHE10P53075 577 aa4.39□□□□□ -1.71
RET3YPL010W TAM41P53230 385 aa4.39□□□□□ -1.71
RET3YPL010W NCS2P53923 493 aaPredicted RBP4.39□□□□□ -1.71
RET3YPL010W RCR2Q03446 210 aaKnown RBP4.39□□□□□ -1.71
RET3YPL010W DLT1Q04216 342 aa4.39□□□□□ -1.71
RET3YPL010W YML053CQ04978 212 aa4.39□□□□□ -1.71
RET3YPL010W ECM7Q06200 448 aa4.39□□□□□ -1.71
RET3YPL010W IES4Q08561 116 aa4.39□□□□□ -1.71
RET3YPL010W FRE5Q08908 694 aa4.39□□□□□ -1.71
RET3YPL010W TIP41Q12199 356 aa4.39□□□□□ -1.71
RET3YPL010W OSH2Q12451 1283 aa4.39□□□□□ -1.71
RET3YPL010W MYO1P08964 1928 aa4.38□□□□□ -1.71
RET3YPL010W CET1O13297 549 aaPredicted RBP4.38□□□□□ -1.71
RET3YPL010W RPS14AP06367 137 aaKnown RBP4.38□□□□□ -1.71
RET3YPL010W TOM70P07213 617 aaKnown RBP4.38□□□□□ -1.71
RET3YPL010W CIT2P08679 460 aa4.38□□□□□ -1.71
RET3YPL010W FRS2P15625 503 aaKnown RBP4.38□□□□□ -1.71
RET3YPL010W PDE1P22434 369 aa4.38□□□□□ -1.71
RET3YPL010W RPC53P25441 422 aa4.38□□□□□ -1.71
RET3YPL010W CYS3P31373 394 aaKnown RBP4.38□□□□□ -1.71
RET3YPL010W PET10P36139 283 aa4.38□□□□□ -1.71
RET3YPL010W YHR078WP38799 552 aa4.38□□□□□ -1.71
RET3YPL010W RPN10P38886 268 aaKnown RBP4.38□□□□□ -1.71
RET3YPL010W RPS14BP39516 138 aaKnown RBP4.38□□□□□ -1.71
RET3YPL010W YER186CP40101 306 aa4.38□□□□□ -1.71
RET3YPL010W MNP1P53163 194 aaPredicted RBP4.38□□□□□ -1.71
RET3YPL010W CUL3P53202 744 aa4.38□□□□□ -1.71
RET3YPL010W SDA1P53313 767 aaKnown RBP4.38□□□□□ -1.71
RET3YPL010W PGA2P53903 129 aa4.38□□□□□ -1.71
RET3YPL010W YNL146WP53906 100 aa4.38□□□□□ -1.71
RET3YPL010W IMP4P53941 290 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms