RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C YPL068CQ02749 293 aa0.98□□□□□ -2.25
RKR1YMR247C GIR2Q03768 265 aaPredicted RBP0.98□□□□□ -2.25
RKR1YMR247C RSF1Q05043 376 aa0.98□□□□□ -2.25
RKR1YMR247C LCB4Q12246 624 aa0.98□□□□□ -2.25
RKR1YMR247C HSP42Q12329 375 aa0.98□□□□□ -2.25
RKR1YMR247C HMG2P12684 1045 aa0.98□□□□□ -2.25
RKR1YMR247C LRE1P25579 583 aaKnown RBP0.98□□□□□ -2.25
RKR1YMR247C PTP2P29461 750 aa0.98□□□□□ -2.25
RKR1YMR247C MVD1P32377 396 aaKnown RBP0.98□□□□□ -2.25
RKR1YMR247C CDS1P38221 457 aa0.98□□□□□ -2.25
RKR1YMR247C YHR112CP38716 378 aa0.98□□□□□ -2.25
RKR1YMR247C OAF1P39720 1047 aaPredicted RBP0.98□□□□□ -2.25
RKR1YMR247C KHA1P40309 873 aa0.98□□□□□ -2.25
RKR1YMR247C PKP1P40530 394 aa0.98□□□□□ -2.25
RKR1YMR247C IRC5P43610 853 aa0.98□□□□□ -2.25
RKR1YMR247C TAF1P46677 1066 aa0.98□□□□□ -2.25
RKR1YMR247C GLO1P50107 326 aa0.98□□□□□ -2.25
RKR1YMR247C UBC9P50623 157 aaPredicted RBP0.98□□□□□ -2.25
RKR1YMR247C SAP4P53036 818 aa0.98□□□□□ -2.25
RKR1YMR247C RRN11Q04712 507 aa0.98□□□□□ -2.25
RKR1YMR247C ESC2Q06340 456 aa0.98□□□□□ -2.25
RKR1YMR247C VAM6Q07468 1049 aa0.98□□□□□ -2.25
RKR1YMR247C IWR1Q07532 353 aaPredicted RBP0.98□□□□□ -2.25
RKR1YMR247C CYK3Q07533 885 aa0.98□□□□□ -2.25
RKR1YMR247C ATX2Q12067 313 aa0.98□□□□□ -2.25
RKR1YMR247C MDM20Q12387 796 aaKnown RBP0.98□□□□□ -2.25
RKR1YMR247C YLR149CQ99296 730 aa0.98□□□□□ -2.25
RKR1YMR247C LPD1P09624 499 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C THR1P17423 357 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C SIR1P21691 654 aa0.97□□□□□ -2.25
RKR1YMR247C YCR061WP25639 631 aa0.97□□□□□ -2.25
RKR1YMR247C PUP2P32379 260 aa0.97□□□□□ -2.25
RKR1YMR247C GSH1P32477 678 aa0.97□□□□□ -2.25
RKR1YMR247C CDC5P32562 705 aa0.97□□□□□ -2.25
RKR1YMR247C TGL1P34163 548 aa0.97□□□□□ -2.25
RKR1YMR247C MIC60P36112 540 aa0.97□□□□□ -2.25
RKR1YMR247C AGP2P38090 596 aa0.97□□□□□ -2.25
RKR1YMR247C TDP1P38319 544 aa0.97□□□□□ -2.25
RKR1YMR247C DIA4P38705 446 aaPredicted RBP0.97□□□□□ -2.25
RKR1YMR247C MTG2P38860 518 aa0.97□□□□□ -2.25
RKR1YMR247C PRM2P40534 656 aa0.97□□□□□ -2.25
RKR1YMR247C VID28P40547 921 aa0.97□□□□□ -2.25
RKR1YMR247C IDS2P46958 469 aa0.97□□□□□ -2.25
RKR1YMR247C NMD5P46970 1048 aa0.97□□□□□ -2.25
RKR1YMR247C VPS4P52917 437 aa0.97□□□□□ -2.25
RKR1YMR247C YGL117WP53133 265 aa0.97□□□□□ -2.25
RKR1YMR247C YGR054WP53235 642 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C SUN4P53616 420 aa0.97□□□□□ -2.25
RKR1YMR247C MAK10Q02197 733 aa0.97□□□□□ -2.25
RKR1YMR247C ATG21Q02887 496 aa0.97□□□□□ -2.25
RKR1YMR247C PHM6Q05637 104 aa0.97□□□□□ -2.25
RKR1YMR247C MRI1Q06489 411 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C GPN2Q08726 347 aaPredicted RBP0.97□□□□□ -2.25
RKR1YMR247C LYS21Q12122 440 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C DCS2Q12123 353 aa0.97□□□□□ -2.25
RKR1YMR247C RUP1Q12242 671 aa0.97□□□□□ -2.25
RKR1YMR247C ICT1Q12385 394 aa0.97□□□□□ -2.25
RKR1YMR247C RPS9BP05755 195 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C RAD18P10862 487 aa0.97□□□□□ -2.25
RKR1YMR247C HOM2P13663 365 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C MCM3P24279 971 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C FEN2P25621 512 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C MSS51P32335 436 aa0.97□□□□□ -2.25
RKR1YMR247C HEM12P32347 362 aaPredicted RBP0.97□□□□□ -2.25
RKR1YMR247C PDB1P32473 366 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C GRX4P32642 244 aa0.97□□□□□ -2.25
RKR1YMR247C BCS1P32839 456 aa0.97□□□□□ -2.25
RKR1YMR247C REC114P32841 428 aa0.97□□□□□ -2.25
RKR1YMR247C HIS7P33734 552 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C TOM20P35180 183 aa0.97□□□□□ -2.25
RKR1YMR247C MTH1P35198 433 aa0.97□□□□□ -2.25
RKR1YMR247C TYS1P36421 394 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C YMC2P38087 329 aa0.97□□□□□ -2.25
RKR1YMR247C MUM2P38236 366 aa0.97□□□□□ -2.25
RKR1YMR247C GPP2P40106 250 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C FKH2P41813 862 aa0.97□□□□□ -2.25
RKR1YMR247C GSM1P42950 618 aa0.97□□□□□ -2.25
RKR1YMR247C BST1P43571 1029 aa0.97□□□□□ -2.25
RKR1YMR247C UBX6P47049 396 aa0.97□□□□□ -2.25
RKR1YMR247C ORC5P50874 479 aa0.97□□□□□ -2.25
RKR1YMR247C MET13P53128 600 aa0.97□□□□□ -2.25
RKR1YMR247C VPS9P54787 451 aa0.97□□□□□ -2.25
RKR1YMR247C FIN1Q03898 291 aa0.97□□□□□ -2.25
RKR1YMR247C YDR179W-AQ03983 463 aa0.97□□□□□ -2.25
RKR1YMR247C BUD22Q04347 519 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C ECM38Q05902 660 aaPredicted RBP0.97□□□□□ -2.25
RKR1YMR247C YOR022CQ12204 715 aa0.97□□□□□ -2.25
RKR1YMR247C TY2B-LR1P0C2J3 1770 aa0.97□□□□□ -2.25
RKR1YMR247C TY2B-FP0CX63 1770 aa0.97□□□□□ -2.25
RKR1YMR247C TY2B-GR2P0CX64 1770 aa0.97□□□□□ -2.25
RKR1YMR247C TY2B-CP25384 1770 aa0.97□□□□□ -2.25
RKR1YMR247C TY2B-DR2Q03494 1770 aa0.97□□□□□ -2.25
RKR1YMR247C TY1B-DR1Q03855 1755 aa0.97□□□□□ -2.25
RKR1YMR247C TY2B-DR3Q07791 1770 aaKnown RBP0.97□□□□□ -2.25
RKR1YMR247C TY2B-OR1Q12113 1770 aa0.97□□□□□ -2.25
RKR1YMR247C TY2B-DR1Q12472 1770 aa0.97□□□□□ -2.25
RKR1YMR247C TY2B-BQ12491 1770 aa0.97□□□□□ -2.25
RKR1YMR247C TY2B-OR2Q12501 1770 aa0.97□□□□□ -2.25
RKR1YMR247C TY1B-DR3Q99231 1755 aa0.97□□□□□ -2.25
RKR1YMR247C VAS1P07806 1104 aaKnown RBP0.97□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 870.8 ms