RNA–Protein interactions for RNA: YMR075W

RCO1, Transcript of Essential component of the Rpd3S histone deacetylase complex, yeast

Gene RCO1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCO1	YMR075W	NAT1	P12945	854 aa	Known RBP	0.78	□□□□□ -2.28
RCO1	YMR075W	RAD4	P14736	754 aa		0.78	□□□□□ -2.28
RCO1	YMR075W	VPS25	P47142	202 aa		0.78	□□□□□ -2.28
RCO1	YMR075W	YGL039W	P53183	348 aa	Known RBP	0.78	□□□□□ -2.28
RCO1	YMR075W	SNU71	P53207	620 aa	Known RBP	0.78	□□□□□ -2.28
RCO1	YMR075W	YGR054W	P53235	642 aa	Known RBP	0.78	□□□□□ -2.28
RCO1	YMR075W	HOP1	P20050	605 aa		0.77	□□□□□ -2.29
RCO1	YMR075W	GRX1	P25373	110 aa	Known RBP	0.77	□□□□□ -2.29
RCO1	YMR075W	HXT1	P32465	570 aa		0.77	□□□□□ -2.29
RCO1	YMR075W	YKR051W	P36142	418 aa		0.77	□□□□□ -2.29
RCO1	YMR075W	CIN1	P40987	1014 aa		0.77	□□□□□ -2.29
RCO1	YMR075W	PXA1	P41909	870 aa		0.77	□□□□□ -2.29
RCO1	YMR075W	BFA1	P47113	574 aa		0.77	□□□□□ -2.29
RCO1	YMR075W	PAL1	Q05518	499 aa	Known RBP	0.77	□□□□□ -2.29
RCO1	YMR075W	GAL4	P04386	881 aa		0.77	□□□□□ -2.29
RCO1	YMR075W	DOT6	P40059	670 aa	Known RBP	0.77	□□□□□ -2.29
RCO1	YMR075W	LAS21	P40367	830 aa		0.77	□□□□□ -2.29
RCO1	YMR075W	PSP1	P50896	841 aa	Known RBP	0.77	□□□□□ -2.29
RCO1	YMR075W	SNP1	Q00916	300 aa	Predicted RBP	0.77	□□□□□ -2.29
RCO1	YMR075W	RPS15	Q01855	142 aa	Known RBP	0.77	□□□□□ -2.29
RCO1	YMR075W	CIT1	P00890	479 aa		0.76	□□□□□ -2.29
RCO1	YMR075W	NOP2	P40991	618 aa	Known RBP	0.76	□□□□□ -2.29
RCO1	YMR075W	RBG2	P53295	368 aa	Known RBP	0.76	□□□□□ -2.29
RCO1	YMR075W	NHX1	Q04121	633 aa		0.76	□□□□□ -2.29
RCO1	YMR075W	PCL8	Q08966	492 aa		0.76	□□□□□ -2.29
RCO1	YMR075W	SSF2	Q12153	453 aa	Predicted RBP	0.76	□□□□□ -2.29
RCO1	YMR075W	PDA1	P16387	420 aa	Known RBP	0.76	□□□□□ -2.29
RCO1	YMR075W	YPT7	P32939	208 aa		0.76	□□□□□ -2.29
RCO1	YMR075W	MSN2	P33748	704 aa		0.76	□□□□□ -2.29
RCO1	YMR075W	KES1	P35844	434 aa	Known RBP	0.76	□□□□□ -2.29
RCO1	YMR075W	ORC5	P50874	479 aa		0.76	□□□□□ -2.29
RCO1	YMR075W	FLC1	Q08967	793 aa		0.76	□□□□□ -2.29
RCO1	YMR075W	PFA4	Q12006	378 aa		0.76	□□□□□ -2.29
RCO1	YMR075W	CDC53	Q12018	815 aa	Known RBP	0.76	□□□□□ -2.29
RCO1	YMR075W	GAL11	P19659	1081 aa		0.75	□□□□□ -2.29
RCO1	YMR075W	BET3	P36149	193 aa		0.75	□□□□□ -2.29
RCO1	YMR075W	MNN2	P38069	597 aa		0.75	□□□□□ -2.29
RCO1	YMR075W	IMD2	P38697	523 aa	Known RBP	0.75	□□□□□ -2.29
RCO1	YMR075W	YHR202W	P38887	602 aa		0.75	□□□□□ -2.29
RCO1	YMR075W	DSS1	P39112	969 aa		0.75	□□□□□ -2.29
RCO1	YMR075W	SPG5	P42933	373 aa		0.75	□□□□□ -2.29
RCO1	YMR075W	IMD3	P50095	523 aa	Known RBP	0.75	□□□□□ -2.29
RCO1	YMR075W	RTA1	P53047	317 aa		0.75	□□□□□ -2.29
RCO1	YMR075W	HUL5	P53119	910 aa		0.75	□□□□□ -2.29
RCO1	YMR075W	AIM41	Q12032	185 aa		0.75	□□□□□ -2.29
RCO1	YMR075W	MAK32	P23060	363 aa		0.74	□□□□□ -2.29
RCO1	YMR075W	MSH1	P25846	959 aa		0.74	□□□□□ -2.29
RCO1	YMR075W	MCD4	P36051	919 aa		0.74	□□□□□ -2.29
RCO1	YMR075W	PAM1	P37304	830 aa	Known RBP	0.74	□□□□□ -2.29
RCO1	YMR075W	PTH1	P38876	190 aa	Known RBP	0.74	□□□□□ -2.29
RCO1	YMR075W	PRE5	P40302	234 aa	Known RBP	0.74	□□□□□ -2.29
RCO1	YMR075W	YJL132W	P47014	750 aa		0.74	□□□□□ -2.29
RCO1	YMR075W	NOP7	P53261	605 aa	Known RBP	0.74	□□□□□ -2.29
RCO1	YMR075W	COG2	P53271	262 aa		0.74	□□□□□ -2.29
RCO1	YMR075W	YMR254C	Q04838	102 aa		0.74	□□□□□ -2.29
RCO1	YMR075W	PSR2	Q07949	397 aa		0.74	□□□□□ -2.29
RCO1	YMR075W	ERR1	P0CX10	437 aa		0.74	□□□□□ -2.29
RCO1	YMR075W	ERR2	P0CX11	437 aa		0.74	□□□□□ -2.29
RCO1	YMR075W	MSS51	P32335	436 aa		0.74	□□□□□ -2.29
RCO1	YMR075W	RPN2	P32565	945 aa	Known RBP	0.74	□□□□□ -2.29
RCO1	YMR075W	TRS65	P32893	560 aa		0.74	□□□□□ -2.29
RCO1	YMR075W	KRE9	P39005	276 aa		0.74	□□□□□ -2.29
RCO1	YMR075W	ATG27	P46989	271 aa		0.74	□□□□□ -2.29
RCO1	YMR075W	YJR039W	P47107	1121 aa		0.74	□□□□□ -2.29
RCO1	YMR075W	BRE5	P53741	515 aa	Known RBP	0.74	□□□□□ -2.29
RCO1	YMR075W	YMR210W	Q03649	449 aa		0.74	□□□□□ -2.29
RCO1	YMR075W	TAF8	Q03750	510 aa		0.74	□□□□□ -2.29
RCO1	YMR075W	CAN1	P04817	590 aa		0.73	□□□□□ -2.29
RCO1	YMR075W	SWC3	P31376	625 aa		0.73	□□□□□ -2.29
RCO1	YMR075W	RAD24	P32641	659 aa		0.73	□□□□□ -2.29
RCO1	YMR075W	MTC2	P34246	357 aa		0.73	□□□□□ -2.29
RCO1	YMR075W	SSZ1	P38788	538 aa	Known RBP	0.73	□□□□□ -2.29
RCO1	YMR075W	YJL107C	P42947	387 aa		0.73	□□□□□ -2.29
RCO1	YMR075W	IGO1	P53897	168 aa		0.73	□□□□□ -2.29
RCO1	YMR075W	LEE1	Q02799	301 aa	Known RBP	0.73	□□□□□ -2.29
RCO1	YMR075W	RNY1	Q02933	434 aa	Known RBP	0.73	□□□□□ -2.29
RCO1	YMR075W	HEL2	Q05580	639 aa	Known RBP	0.73	□□□□□ -2.29
RCO1	YMR075W	LYS21	Q12122	440 aa	Known RBP	0.73	□□□□□ -2.29
RCO1	YMR075W	YLL056C	Q12177	298 aa		0.73	□□□□□ -2.29
RCO1	YMR075W	SEC1	P30619	724 aa	Known RBP	0.73	□□□□□ -2.29
RCO1	YMR075W	PRS1	P32895	427 aa	Known RBP	0.73	□□□□□ -2.29
RCO1	YMR075W	YKL091C	P33324	310 aa	Known RBP	0.73	□□□□□ -2.29
RCO1	YMR075W	YPT10	P38146	199 aa		0.73	□□□□□ -2.29
RCO1	YMR075W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	0.73	□□□□□ -2.29	not detected
RCO1	YMR075W	MAL31	P38156	614 aa		0.73	□□□□□ -2.29
RCO1	YMR075W	YHR020W	P38708	688 aa	Known RBP	0.73	□□□□□ -2.29
RCO1	YMR075W	DAP1	Q12091	152 aa		0.73	□□□□□ -2.29
RCO1	YMR075W	YPK1	P12688	680 aa	Known RBP	0.72	□□□□□ -2.29
RCO1	YMR075W	HNM1	P19807	563 aa		0.72	□□□□□ -2.29
RCO1	YMR075W	BET2	P20133	325 aa		0.72	□□□□□ -2.29
RCO1	YMR075W	GSY1	P23337	708 aa		0.72	□□□□□ -2.29
RCO1	YMR075W	TIM23	P32897	222 aa		0.72	□□□□□ -2.29
RCO1	YMR075W	ARN1	P38731	627 aa		0.72	□□□□□ -2.29
RCO1	YMR075W	BOR1	P53838	576 aa		0.72	□□□□□ -2.29
RCO1	YMR075W	USA1	Q03714	838 aa		0.72	□□□□□ -2.29
RCO1	YMR075W	CDC9	P04819	755 aa		0.71	□□□□□ -2.3
RCO1	YMR075W	GDH3	P39708	457 aa		0.71	□□□□□ -2.3
RCO1	YMR075W	SMK1	P41808	388 aa		0.71	□□□□□ -2.3
RCO1	YMR075W	CAF16	P43569	289 aa		0.71	□□□□□ -2.3
RCO1	YMR075W	UBP8	P50102	471 aa		0.71	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms