RNA–Protein interactions for RNA: YML040W

YML040W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YML040W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YML040WYML040W PCD1Q12524 340 aa5.1□□□□□ -1.59
YML040WYML040W RTP1Q12751 981 aa5.1□□□□□ -1.59
YML040WYML040W SEC12P11655 471 aa5.09□□□□□ -1.59
YML040WYML040W HIS7P33734 552 aaKnown RBP5.09□□□□□ -1.59
YML040WYML040W MUD2P36084 527 aaKnown RBP5.09□□□□□ -1.59
YML040WYML040W YEL025CP39991 1188 aa5.09□□□□□ -1.59
YML040WYML040W UPF3P48412 387 aaKnown RBP5.09□□□□□ -1.59
YML040WYML040W TEL2P53038 688 aa5.09□□□□□ -1.59
YML040WYML040W EFR3Q03653 782 aaKnown RBP5.09□□□□□ -1.59
YML040WYML040W NTO1Q12311 748 aa5.09□□□□□ -1.59
YML040WYML040W PPR1P07272 904 aaPredicted RBP5.08□□□□□ -1.6
YML040WYML040W VPS34P22543 875 aa5.08□□□□□ -1.6
YML040WYML040W CTS1P29029 562 aa5.08□□□□□ -1.6
YML040WYML040W NTH1P32356 751 aa5.08□□□□□ -1.6
YML040WYML040W RPT3P33298 428 aaKnown RBP5.08□□□□□ -1.6
YML040WYML040W YHR097CP38809 366 aaKnown RBP5.08□□□□□ -1.6
YML040WYML040W NOC2P39744 710 aaKnown RBP5.08□□□□□ -1.6
YML040WYML040W NOP16P40007 231 aaKnown RBP5.08□□□□□ -1.6
YML040WYML040W ARB1P40024 610 aaKnown RBP5.08□□□□□ -1.6
YML040WYML040W TMA108P40462 946 aa5.08□□□□□ -1.6
YML040WYML040W FAF1P40546 346 aaPredicted RBP5.08□□□□□ -1.6
YML040WYML040W YAP1802P53309 568 aa5.08□□□□□ -1.6
YML040WYML040W ESF2P53743 316 aaKnown RBP5.08□□□□□ -1.6
YML040WYML040W MDM1Q01846 1127 aa5.08□□□□□ -1.6
YML040WYML040W RNT1Q02555 471 aa5.08□□□□□ -1.6
YML040WYML040W ATG21Q02887 496 aa5.08□□□□□ -1.6
YML040WYML040W YKU80Q04437 629 aa5.08□□□□□ -1.6
YML040WYML040W HOF1Q05080 669 aa5.08□□□□□ -1.6
YML040WYML040W VAM6Q07468 1049 aa5.08□□□□□ -1.6
YML040WYML040W HCM1P25364 564 aa5.07□□□□□ -1.6
YML040WYML040W FUB1P25659 250 aa5.07□□□□□ -1.6
YML040WYML040W MRPL36P36531 177 aa5.07□□□□□ -1.6
YML040WYML040W SAP4P53036 818 aa5.07□□□□□ -1.6
YML040WYML040W CSL4P53859 292 aaPredicted RBP5.07□□□□□ -1.6
YML040WYML040W USA1Q03714 838 aa5.07□□□□□ -1.6
YML040WYML040W SNO4Q04902 237 aa5.07□□□□□ -1.6
YML040WYML040W YDL086WQ07505 273 aa5.07□□□□□ -1.6
YML040WYML040W SDH5Q08230 162 aa5.07□□□□□ -1.6
YML040WYML040W HSP33Q08914 237 aaKnown RBP5.07□□□□□ -1.6
YML040WYML040W HSP32Q08992 237 aa5.07□□□□□ -1.6
YML040WYML040W FUM1P08417 488 aaKnown RBP5.06□□□□□ -1.6
YML040WYML040W SAN1P22470 610 aa5.06□□□□□ -1.6
YML040WYML040W YCR061WP25639 631 aa5.06□□□□□ -1.6
YML040WYML040W CAP1P28495 268 aaKnown RBP5.06□□□□□ -1.6
YML040WYML040W PAH1P32567 862 aa5.06□□□□□ -1.6
YML040WYML040W MPE1P35728 441 aaKnown RBP5.06□□□□□ -1.6
YML040WYML040W DHR2P36009 735 aaPredicted RBP5.06□□□□□ -1.6
YML040WYML040W GEX2P36173 615 aa5.06□□□□□ -1.6
YML040WYML040W PPS1P38148 807 aa5.06□□□□□ -1.6
YML040WYML040W UBS1P38290 277 aa5.06□□□□□ -1.6
YML040WYML040W VPS8P39702 1274 aa5.06□□□□□ -1.6
YML040WYML040W RIC1P40395 1056 aa5.06□□□□□ -1.6
YML040WYML040W ESL1P40456 1118 aa5.06□□□□□ -1.6
YML040WYML040W IDS2P46958 469 aa5.06□□□□□ -1.6
YML040WYML040W TAM41P53230 385 aa5.06□□□□□ -1.6
YML040WYML040W YSH1Q06224 779 aaPredicted RBP5.06□□□□□ -1.6
YML040WYML040W AIM39Q08223 395 aa5.06□□□□□ -1.6
YML040WYML040W CTT1P06115 562 aa5.05□□□□□ -1.6
YML040WYML040W ELF1P36053 145 aa5.05□□□□□ -1.6
YML040WYML040W BUD16P39988 312 aa5.05□□□□□ -1.6
YML040WYML040W YGR151CP53287 111 aa5.05□□□□□ -1.6
YML040WYML040W CBK1P53894 756 aa5.05□□□□□ -1.6
YML040WYML040W RPS15Q01855 142 aaKnown RBP5.05□□□□□ -1.6
YML040WYML040W USV1Q12132 391 aa5.05□□□□□ -1.6
YML040WYML040W RKI1Q12189 258 aa5.05□□□□□ -1.6
YML040WYML040W COX17Q12287 69 aa5.05□□□□□ -1.6
YML040WYML040W SEM1O94742 89 aa5.04□□□□□ -1.6
YML040WYML040W PET122P10355 254 aa5.04□□□□□ -1.6
YML040WYML040W AAC3P18238 307 aa5.04□□□□□ -1.6
YML040WYML040W TEF4P36008 412 aaKnown RBP5.04□□□□□ -1.6
YML040WYML040W UME6P39001 836 aa5.04□□□□□ -1.6
YML040WYML040W NDE1P40215 560 aa5.04□□□□□ -1.6
YML040WYML040W AVT1P47082 602 aa5.04□□□□□ -1.6
YML040WYML040W ATG4P53867 494 aa5.04□□□□□ -1.6
YML040WYML040W RIA1P53893 1110 aa5.04□□□□□ -1.6
YML040WYML040W YPL108WQ02872 168 aaPredicted RBP5.04□□□□□ -1.6
YML040WYML040W YOL073CQ08232 322 aa5.04□□□□□ -1.6
YML040WYML040W CDC31P06704 161 aaKnown RBP5.03□□□□□ -1.6
YML040WYML040W CDC16P09798 840 aa5.03□□□□□ -1.6
YML040WYML040W STE4P18851 423 aa5.03□□□□□ -1.6
YML040WYML040W RAD16P31244 790 aa5.03□□□□□ -1.6
YML040WYML040W SDH8P38345 138 aa5.03□□□□□ -1.6
YML040WYML040W SUL1P38359 859 aa5.03□□□□□ -1.6
YML040WYML040W YEL068CP39977 110 aa5.03□□□□□ -1.6
YML040WYML040W FMP10P40098 244 aa5.03□□□□□ -1.6
YML040WYML040W SIP4P46954 829 aa5.03□□□□□ -1.6
YML040WYML040W UFO1Q04511 668 aa5.03□□□□□ -1.6
YML040WYML040W TPK1P06244 397 aa5.02□□□□□ -1.61
YML040WYML040W TY2A-LR1P0C2J4 438 aa5.02□□□□□ -1.61
YML040WYML040W TY2A-FP0CX61 438 aa5.02□□□□□ -1.61
YML040WYML040W TY2A-GR2P0CX62 438 aa5.02□□□□□ -1.61
YML040WYML040W ABF1P14164 731 aa5.02□□□□□ -1.61
YML040WYML040W PFK2P16862 959 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
YML040WYML040W TY2A-CP25383 438 aa5.02□□□□□ -1.61
YML040WYML040W URK1P27515 501 aa5.02□□□□□ -1.61
YML040WYML040W CNE1P27825 502 aa5.02□□□□□ -1.61
YML040WYML040W PMI40P29952 429 aaKnown RBP5.02□□□□□ -1.61
YML040WYML040W CDC5P32562 705 aa5.02□□□□□ -1.61
YML040WYML040W YPT10P38146 199 aa5.02□□□□□ -1.61
YML040WYML040W KSP1P38691 1029 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 53.9 ms