RNA–Protein interactions for RNA: YLR277C

YSH1, Transcript of Putative endoribonuclease, yeast

Gene YSH1, Length 2,340 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSH1	YLR277C	TRS120	Q04183	1289 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	BSC2	Q05611	235 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	GRS2	Q06817	618 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	TRE2	Q08693	809 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	PSF3	Q12146	194 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	TAH18	Q12181	623 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	TMA17	Q12513	150 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	YOR019W	Q99248	730 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	SEY1	Q99287	776 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	HAP1	P0CE41	1502 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	RPP2B	P02400	110 aa	Known RBP	4.22	□□□□□ -1.73
YSH1	YLR277C	CAR2	P07991	424 aa	Known RBP	4.22	□□□□□ -1.73
YSH1	YLR277C	CBP3	P21560	335 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	SRM1	P21827	482 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	UBA1	P22515	1024 aa	Known RBP	4.22	□□□□□ -1.73
YSH1	YLR277C	VAC17	P25591	423 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	YCR101C	P25607	182 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	HSP30	P25619	332 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	DBF20	P32328	564 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	MEI5	P32489	222 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	RPT5	P33297	434 aa	Known RBP	4.22	□□□□□ -1.73
YSH1	YLR277C	SPT10	P35208	640 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	VPS21	P36017	210 aa	Known RBP	4.22	□□□□□ -1.73
YSH1	YLR277C	TPO5	P36029	618 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	MMS4	P38257	691 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	STL1	P39932	569 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	SNL1	P40548	159 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	YGR012W	P53206	393 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	YGR127W	P53275	312 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	ARC35	P53731	342 aa	Known RBP	4.22	□□□□□ -1.73
YSH1	YLR277C	CNM67	P53865	581 aa	Known RBP	4.22	□□□□□ -1.73
YSH1	YLR277C	KTR6	P54070	446 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	PIG1	Q06216	648 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	YDL114W	Q07530	308 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	WHI4	Q07655	649 aa	Known RBP	4.22	□□□□□ -1.73
YSH1	YLR277C	BRE4	Q07660	1125 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	FRA1	Q07825	749 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	DIS3	Q08162	1001 aa	Known RBP	4.22	□□□□□ -1.73
YSH1	YLR277C	SGO1	Q08490	590 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	MSH5	Q12175	901 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	SCM3	Q12334	223 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	ARP7	Q12406	477 aa		4.22	□□□□□ -1.73
YSH1	YLR277C	TRM732	Q03496	1420 aa		4.21	□□□□□ -1.73
YSH1	YLR277C	SCEI	P03882	235 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	HSF1	P10961	833 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	STE12	P13574	688 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	KCC4	P25389	1037 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
YSH1	YLR277C	GAR1	P28007	205 aa	Known RBP	4.21	□□□□□ -1.74
YSH1	YLR277C	SIN4	P32259	974 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	RAD5	P32849	1169 aa	Predicted RBP	4.21	□□□□□ -1.74
YSH1	YLR277C	CAF4	P36130	643 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	LIN1	P38852	340 aa	Predicted RBP	4.21	□□□□□ -1.74
YSH1	YLR277C	TDA11	P38854	504 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	YRB2	P40517	327 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	ARF3	P40994	183 aa	RIP-Chip data	4.21	□□□□□ -1.74	not detected
YSH1	YLR277C	ASE1	P50275	885 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	MRM2	P53123	320 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	YGR054W	P53235	642 aa	Known RBP	4.21	□□□□□ -1.74
YSH1	YLR277C	CAF120	P53836	1060 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	APP1	P53933	587 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	MET14	Q02196	202 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	MEC3	Q02574	474 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	RBA50	Q04418	439 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	DPB4	Q04603	196 aa	Known RBP	4.21	□□□□□ -1.74
YSH1	YLR277C	SSP2	Q08646	371 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	RSA1	Q08932	381 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	APL4	Q12028	832 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	YLR358C	O13565	187 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	CBP2	P03874	630 aa	Predicted RBP	4.21	□□□□□ -1.74
YSH1	YLR277C	CAD1	P24813	409 aa	Known RBP	4.21	□□□□□ -1.74
YSH1	YLR277C	IXR1	P33417	597 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	MSN4	P33749	630 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	DBP7	P36120	742 aa	Known RBP	4.21	□□□□□ -1.74
YSH1	YLR277C	PCH2	P38126	564 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	GND1	P38720	489 aa	Known RBP	4.21	□□□□□ -1.74
YSH1	YLR277C	LNP1	P38878	278 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	HXT6	P39003	570 aa	Known RBP	4.21	□□□□□ -1.74
YSH1	YLR277C	HXT7	P39004	570 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	YER184C	P39961	794 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	EMP65	P40085	556 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	NUP82	P40368	713 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	YGL176C	P46945	554 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	NCS6	P53088	359 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	RCF2	P53721	224 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	ORC4	P54791	529 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	PRO2	P54885	456 aa	Known RBP	4.21	□□□□□ -1.74
YSH1	YLR277C	GTR1	Q00582	310 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	REC102	Q02721	264 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	PPM1	Q04081	328 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	KAP95	Q06142	861 aa	Known RBP	4.21	□□□□□ -1.74
YSH1	YLR277C	KEL3	Q08979	651 aa	Predicted RBP	4.21	□□□□□ -1.74
YSH1	YLR277C	TGS1	Q12052	315 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	MED2	Q12124	431 aa		4.21	□□□□□ -1.74
YSH1	YLR277C	PHO5	P00635	467 aa		4.2	□□□□□ -1.74
YSH1	YLR277C	GAL2	P13181	574 aa		4.2	□□□□□ -1.74
YSH1	YLR277C	PMR1	P13586	950 aa		4.2	□□□□□ -1.74
YSH1	YLR277C	FUS3	P16892	353 aa	Known RBP	4.2	□□□□□ -1.74
YSH1	YLR277C	PRP2	P20095	876 aa	Predicted RBP	4.2	□□□□□ -1.74
YSH1	YLR277C	SEC62	P21825	274 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms