RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W SYN8P31377 255 aa14.27□□□□□ -0.13
RPN10YHR200W TPS2P31688 896 aaKnown RBP14.27□□□□□ -0.13
RPN10YHR200W HXT3P32466 567 aaKnown RBP14.27□□□□□ -0.13
RPN10YHR200W CTK3P46963 296 aaPredicted RBP14.27□□□□□ -0.13
RPN10YHR200W RSM26P47141 266 aa14.27□□□□□ -0.13
RPN10YHR200W YGR127WP53275 312 aa14.27□□□□□ -0.13
RPN10YHR200W SAM3Q08986 587 aa14.27□□□□□ -0.13
RPN10YHR200W PAT1P25644 796 aaKnown RBP14.26□□□□□ -0.13
RPN10YHR200W URA7P28274 579 aaKnown RBP14.26□□□□□ -0.13
RPN10YHR200W PSE1P32337 1089 aaKnown RBP14.26□□□□□ -0.13
RPN10YHR200W SQT1P35184 431 aa14.26□□□□□ -0.13
RPN10YHR200W KES1P35844 434 aaKnown RBP14.26□□□□□ -0.13
RPN10YHR200W SIF2P38262 535 aa14.26□□□□□ -0.13
RPN10YHR200W REV7P38927 245 aa14.26□□□□□ -0.13
RPN10YHR200W NUP60P39705 539 aa14.26□□□□□ -0.13
RPN10YHR200W VAC8P39968 578 aa14.26□□□□□ -0.13
RPN10YHR200W PSP1P50896 841 aaKnown RBP14.26□□□□□ -0.13
RPN10YHR200W ZIP2P53061 704 aa14.26□□□□□ -0.13
RPN10YHR200W INA17Q02888 182 aa14.26□□□□□ -0.13
RPN10YHR200W VHS3Q08438 674 aa14.26□□□□□ -0.13
RPN10YHR200W AI5_ALPHAQ9ZZX1 630 aa14.26□□□□□ -0.13
RPN10YHR200W YPR117WQ06116 2489 aa14.26□□□□□ -0.13
RPN10YHR200W MTF1P14908 341 aaKnown RBP14.25□□□□□ -0.13
RPN10YHR200W RAD16P31244 790 aa14.25□□□□□ -0.13
RPN10YHR200W OAF3P36023 863 aa14.25□□□□□ -0.13
RPN10YHR200W YEL028WP39989 153 aa14.25□□□□□ -0.13
RPN10YHR200W EDC3P39998 551 aaKnown RBP14.25□□□□□ -0.13
RPN10YHR200W UTP8P53276 713 aaKnown RBP14.25□□□□□ -0.13
RPN10YHR200W NDJ1Q12366 352 aa14.25□□□□□ -0.13
RPN10YHR200W ILS1P09436 1072 aaKnown RBP14.24□□□□□ -0.13
RPN10YHR200W HMG2P12684 1045 aa14.24□□□□□ -0.13
RPN10YHR200W STB5P38699 743 aa14.24□□□□□ -0.13
RPN10YHR200W RIM4P38741 713 aa14.24□□□□□ -0.13
RPN10YHR200W ENT5Q03769 411 aaKnown RBP14.24□□□□□ -0.13
RPN10YHR200W ARA2Q04212 335 aa14.24□□□□□ -0.13
RPN10YHR200W UTP13Q05946 817 aaKnown RBP14.24□□□□□ -0.13
RPN10YHR200W SFH1Q06168 426 aa14.24□□□□□ -0.13
RPN10YHR200W YOR223WQ12015 292 aa14.24□□□□□ -0.13
RPN10YHR200W UBR2Q07963 1872 aa14.23□□□□□ -0.13
RPN10YHR200W ENO2P00925 437 aaKnown RBP14.23□□□□□ -0.13
RPN10YHR200W SPE1P08432 466 aa14.23□□□□□ -0.13
RPN10YHR200W PYC1P11154 1178 aaKnown RBP14.23□□□□□ -0.13
RPN10YHR200W ADY2P25613 283 aa14.23□□□□□ -0.13
RPN10YHR200W KAP104P38217 918 aaKnown RBP14.23□□□□□ -0.13
RPN10YHR200W ALA1P40825 983 aaKnown RBP14.23□□□□□ -0.13
RPN10YHR200W UFE1P41834 346 aa14.23□□□□□ -0.13
RPN10YHR200W CNN1P43618 361 aa14.23□□□□□ -0.13
RPN10YHR200W RPS10BP46784 105 aaKnown RBP14.23□□□□□ -0.13
RPN10YHR200W USA1Q03714 838 aa14.23□□□□□ -0.13
RPN10YHR200W RPS10AQ08745 105 aaPredicted RBP14.23□□□□□ -0.13
RPN10YHR200W PUF2Q12221 1075 aaKnown RBP RIP-Chip data14.23□□□□□ -0.13not detected
RPN10YHR200W YLR422WQ06409 1932 aa14.23□□□□□ -0.13
RPN10YHR200W URK1P27515 501 aa14.22□□□□□ -0.13
RPN10YHR200W HEM12P32347 362 aaPredicted RBP14.22□□□□□ -0.13
RPN10YHR200W SEC6P32844 805 aa14.22□□□□□ -0.13
RPN10YHR200W PTC3P34221 468 aaKnown RBP14.22□□□□□ -0.13
RPN10YHR200W DSN1P40568 576 aa14.22□□□□□ -0.13
RPN10YHR200W MAF1P41910 395 aa14.22□□□□□ -0.13
RPN10YHR200W EMW1P42842 904 aaKnown RBP14.22□□□□□ -0.13
RPN10YHR200W INP2Q03824 705 aa14.22□□□□□ -0.13
RPN10YHR200W CBC2Q08920 208 aaKnown RBP RIP-Chip data14.22□□□□□ -0.13not detected
RPN10YHR200W ILV2P07342 687 aaKnown RBP14.21□□□□□ -0.13
RPN10YHR200W KIP2P28743 706 aa14.21□□□□□ -0.13
RPN10YHR200W NDI1P32340 513 aa14.21□□□□□ -0.13
RPN10YHR200W ATG12P38316 186 aa14.21□□□□□ -0.13
RPN10YHR200W SMF2P38778 549 aa14.21□□□□□ -0.13
RPN10YHR200W PPE1P38796 400 aa14.21□□□□□ -0.13
RPN10YHR200W SFB3P38810 929 aa14.21□□□□□ -0.13
RPN10YHR200W YNL144CP53907 740 aa14.21□□□□□ -0.13
RPN10YHR200W NMA111P53920 997 aa14.21□□□□□ -0.13
RPN10YHR200W DOS2P54858 310 aa14.21□□□□□ -0.13
RPN10YHR200W RLI1Q03195 608 aaKnown RBP14.21□□□□□ -0.13
RPN10YHR200W PIG1Q06216 648 aa14.21□□□□□ -0.13
RPN10YHR200W LCB4Q12246 624 aa14.21□□□□□ -0.13
RPN10YHR200W MIS1P09440 975 aaKnown RBP14.2□□□□□ -0.14
RPN10YHR200W ERR1P0CX10 437 aa14.2□□□□□ -0.14
RPN10YHR200W ERR2P0CX11 437 aa14.2□□□□□ -0.14
RPN10YHR200W GPA2P10823 449 aa14.2□□□□□ -0.14
RPN10YHR200W HSP60P19882 572 aaKnown RBP14.2□□□□□ -0.14
RPN10YHR200W MSH1P25846 959 aa14.2□□□□□ -0.14
RPN10YHR200W URA10P30402 227 aa14.2□□□□□ -0.14
RPN10YHR200W SGE1P33335 543 aa14.2□□□□□ -0.14
RPN10YHR200W URA8P38627 578 aaPredicted RBP14.2□□□□□ -0.14
RPN10YHR200W SRP68P38687 599 aaKnown RBP14.2□□□□□ -0.14
RPN10YHR200W SPC97P38863 823 aa14.2□□□□□ -0.14
RPN10YHR200W YAT2P40017 923 aa14.2□□□□□ -0.14
RPN10YHR200W ERR3P42222 437 aa14.2□□□□□ -0.14
RPN10YHR200W BST1P43571 1029 aa14.2□□□□□ -0.14
RPN10YHR200W ROK1P45818 564 aaPredicted RBP14.2□□□□□ -0.14
RPN10YHR200W TRS85P46944 698 aa14.2□□□□□ -0.14
RPN10YHR200W CUE5Q08412 411 aaKnown RBP14.2□□□□□ -0.14
RPN10YHR200W TSR4P25040 408 aa14.19□□□□□ -0.14
RPN10YHR200W ADD66P36040 267 aa14.19□□□□□ -0.14
RPN10YHR200W CAB3P36076 571 aa14.19□□□□□ -0.14
RPN10YHR200W SAF1P38352 637 aa14.19□□□□□ -0.14
RPN10YHR200W VPS41P38959 992 aa14.19□□□□□ -0.14
RPN10YHR200W DPH1P40487 425 aaKnown RBP14.19□□□□□ -0.14
RPN10YHR200W TAH11P47112 604 aa14.19□□□□□ -0.14
RPN10YHR200W PRP24P49960 444 aaKnown RBP14.19□□□□□ -0.14
RPN10YHR200W YNL034WP53963 612 aa14.19□□□□□ -0.14
Retrieved 100 of 5,963 RNA–protein pairs in 79.2 ms