RNA–Protein interactions for RNA: YHL027W

RIM101, Transcript of Cys2His2 zinc-finger transcriptional repressor, yeast

Gene RIM101, Length 1,878 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM101	YHL027W	HAA1	Q12753	694 aa	Known RBP	5.69	□□□□□ -1.5
RIM101	YHL027W	FIG2	P25653	1609 aa		5.69	□□□□□ -1.5
RIM101	YHL027W	CLN2	P20438	545 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	SAN1	P22470	610 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	PRP45	P28004	379 aa	Predicted RBP	5.68	□□□□□ -1.5
RIM101	YHL027W	TRK2	P28584	889 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	DBF4	P32325	704 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	SMY2	P32909	740 aa	Known RBP	5.68	□□□□□ -1.5
RIM101	YHL027W	PEX5	P35056	612 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	CLG1	P35190	452 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	IFA38	P38286	347 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	CCT3	P39077	534 aa	Known RBP	5.68	□□□□□ -1.5
RIM101	YHL027W	SER3	P40054	469 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	UBP7	P40453	1071 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	PAC11	P40960	533 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	FIG4	P42837	879 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	FAR7	P43592	221 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	COS5	P47187	383 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	PSP2	P50109	593 aa	Known RBP	5.68	□□□□□ -1.5
RIM101	YHL027W	RBG2	P53295	368 aa	Known RBP	5.68	□□□□□ -1.5
RIM101	YHL027W	HEH2	Q03281	663 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	RSM28	Q03430	361 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	RGC1	Q06108	1083 aa	Known RBP	5.68	□□□□□ -1.5
RIM101	YHL027W	SMD2	Q06217	110 aa	Known RBP	5.68	□□□□□ -1.5
RIM101	YHL027W	PUS7	Q08647	676 aa	Known RBP	5.68	□□□□□ -1.5
RIM101	YHL027W	TRE1	Q08919	783 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	MED1	Q12321	566 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	ADF1	Q2V2Q1	113 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	LEU1	P07264	779 aa	Known RBP	5.68	□□□□□ -1.5
RIM101	YHL027W	PET494	P07390	489 aa	Predicted RBP	5.68	□□□□□ -1.5
RIM101	YHL027W	SPS1	P08458	490 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	MRP13	P12686	339 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	KIN2	P13186	1147 aa	Known RBP	5.68	□□□□□ -1.5
RIM101	YHL027W	VPS3	P23643	1011 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	STE5	P32917	917 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	DOM34	P33309	386 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	MAE1	P36013	669 aa	Known RBP	5.68	□□□□□ -1.5
RIM101	YHL027W	DUG2	P38149	878 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	NCL1	P38205	684 aa	Known RBP	5.68	□□□□□ -1.5
RIM101	YHL027W	YBR285W	P38354	144 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	CCT6	P39079	546 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	SSP120	P39931	234 aa	Known RBP	5.68	□□□□□ -1.5
RIM101	YHL027W	FTR1	P40088	404 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	CIT3	P43635	486 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	NBP1	P52919	319 aa	Predicted RBP	5.68	□□□□□ -1.5
RIM101	YHL027W	SCY1	P53009	804 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	RMR1	P53060	241 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	COG2	P53271	262 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	UTP8	P53276	713 aa	Known RBP	5.68	□□□□□ -1.5
RIM101	YHL027W	BIO4	P53630	237 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	SKI8	Q02793	397 aa	Predicted RBP	5.68	□□□□□ -1.5
RIM101	YHL027W	COX20	Q04935	205 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	SPC2	Q04969	178 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	YMR226C	Q05016	267 aa	Known RBP	5.68	□□□□□ -1.5
RIM101	YHL027W	INM2	Q05533	292 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	YCS4	Q06156	1176 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	ATG29	Q12092	213 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	YOR342C	Q12182	319 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	NYV1	Q12255	253 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	HER1	Q12276	1246 aa		5.68	□□□□□ -1.5
RIM101	YHL027W	ILS1	P09436	1072 aa	Known RBP	5.67	□□□□□ -1.5
RIM101	YHL027W	SEN2	P16658	377 aa		5.67	□□□□□ -1.5
RIM101	YHL027W	LCB1	P25045	558 aa	Known RBP	5.67	□□□□□ -1.5
RIM101	YHL027W	GFD2	P25370	566 aa	Known RBP	5.67	□□□□□ -1.5
RIM101	YHL027W	PRO3	P32263	286 aa	Known RBP	5.67	□□□□□ -1.5
RIM101	YHL027W	YSC84	P32793	468 aa		5.67	□□□□□ -1.5
RIM101	YHL027W	RAD54	P32863	898 aa		5.67	□□□□□ -1.5
RIM101	YHL027W	YBR139W	P38109	508 aa		5.67	□□□□□ -1.5
RIM101	YHL027W	VPS29	P38759	282 aa		5.67	□□□□□ -1.5
RIM101	YHL027W	SMF2	P38778	549 aa		5.67	□□□□□ -1.5
RIM101	YHL027W	GGA2	P38817	585 aa	Known RBP	5.67	□□□□□ -1.5
RIM101	YHL027W	GDH3	P39708	457 aa		5.67	□□□□□ -1.5
RIM101	YHL027W	SEO1	P39709	593 aa		5.67	□□□□□ -1.5
RIM101	YHL027W	TGL3	P40308	642 aa		5.67	□□□□□ -1.5
RIM101	YHL027W	GNP1	P48813	663 aa		5.67	□□□□□ -1.5
RIM101	YHL027W	GUP1	P53154	560 aa		5.67	□□□□□ -1.5
RIM101	YHL027W	PGA2	P53903	129 aa		5.67	□□□□□ -1.5
RIM101	YHL027W	YNL058C	P53947	316 aa		5.67	□□□□□ -1.5
RIM101	YHL027W	BUD22	Q04347	519 aa	Known RBP	5.67	□□□□□ -1.5
RIM101	YHL027W	BRE4	Q07660	1125 aa		5.67	□□□□□ -1.5
RIM101	YHL027W	TUM1	Q08686	304 aa	Known RBP	5.67	□□□□□ -1.5
RIM101	YHL027W	GPM3	Q12326	303 aa		5.67	□□□□□ -1.5
RIM101	YHL027W	TMA7	Q3E764	64 aa	Known RBP	5.67	□□□□□ -1.5
RIM101	YHL027W	APM4	Q99186	491 aa		5.67	□□□□□ -1.5
RIM101	YHL027W	RPN13	O13563	156 aa		5.66	□□□□□ -1.5
RIM101	YHL027W	KSS1	P14681	368 aa		5.66	□□□□□ -1.5
RIM101	YHL027W	SEC15	P22224	910 aa		5.66	□□□□□ -1.5
RIM101	YHL027W	VPS34	P22543	875 aa		5.66	□□□□□ -1.5
RIM101	YHL027W	MGT1	P26188	188 aa		5.66	□□□□□ -1.5
RIM101	YHL027W	IRE1	P32361	1115 aa		5.66	□□□□□ -1.5
RIM101	YHL027W	VMA6	P32366	345 aa	Known RBP	5.66	□□□□□ -1.5
RIM101	YHL027W	HXT3	P32466	567 aa	Known RBP	5.66	□□□□□ -1.5
RIM101	YHL027W	PRP19	P32523	503 aa	Known RBP	5.66	□□□□□ -1.5
RIM101	YHL027W	PEP7	P32609	515 aa		5.66	□□□□□ -1.5
RIM101	YHL027W	VMA8	P32610	256 aa	Known RBP	5.66	□□□□□ -1.5
RIM101	YHL027W	MNN2	P38069	597 aa		5.66	□□□□□ -1.5
RIM101	YHL027W	EXO5	P38289	585 aa		5.66	□□□□□ -1.5
RIM101	YHL027W	RPH1	P39956	796 aa		5.66	□□□□□ -1.5
RIM101	YHL027W	YTA12	P40341	825 aa		5.66	□□□□□ -1.5
RIM101	YHL027W	ULP2	P40537	1034 aa	Predicted RBP	5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 117.8 ms