RNA–Protein interactions for RNA: YGL238W

CSE1, Transcript of Nuclear envelope protein that mediates the nuclear export of Srp1p, yeastyeast

Gene CSE1, Length 2,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSE1YGL238W GRS2Q06817 618 aa0.78□□□□□ -2.28
CSE1YGL238W WRS1Q12109 432 aaKnown RBP0.78□□□□□ -2.28
CSE1YGL238W PNO1Q99216 274 aaKnown RBP0.78□□□□□ -2.28
CSE1YGL238W SSD1P24276 1250 aaKnown RBP RIP-Chip data0.78□□□□□ -2.28not detected
CSE1YGL238W OCA5P38738 679 aa0.78□□□□□ -2.28
CSE1YGL238W TOM71P38825 639 aaKnown RBP0.78□□□□□ -2.28
CSE1YGL238W RAD26P40352 1085 aa0.78□□□□□ -2.28
CSE1YGL238W IRC7P43623 340 aa0.78□□□□□ -2.28
CSE1YGL238W LYS21Q12122 440 aaKnown RBP0.78□□□□□ -2.28
CSE1YGL238W RPS21BQ3E754 87 aaKnown RBP0.78□□□□□ -2.28
CSE1YGL238W TY1B-DR4Q07793 1604 aa0.78□□□□□ -2.28
CSE1YGL238W PEP1P32319 1579 aa0.78□□□□□ -2.28
CSE1YGL238W HSL1P34244 1518 aa0.78□□□□□ -2.28
CSE1YGL238W STI1P15705 589 aaKnown RBP RIP-Chip data0.78□□□□□ -2.29not detected
CSE1YGL238W KGD2P19262 463 aaPredicted RBP0.78□□□□□ -2.29
CSE1YGL238W GAL11P19659 1081 aa0.78□□□□□ -2.29
CSE1YGL238W COQ3P27680 312 aa0.78□□□□□ -2.29
CSE1YGL238W CCL1P37366 393 aa0.78□□□□□ -2.29
CSE1YGL238W PBP2P38151 413 aaKnown RBP RIP-Chip data0.78□□□□□ -2.29not detected
CSE1YGL238W BRN1P38170 754 aa0.78□□□□□ -2.29
CSE1YGL238W MTG2P38860 518 aa0.78□□□□□ -2.29
CSE1YGL238W RPN10P38886 268 aaKnown RBP0.78□□□□□ -2.29
CSE1YGL238W ECM9Q02202 377 aa0.78□□□□□ -2.29
CSE1YGL238W VBA4Q04602 768 aaKnown RBP0.78□□□□□ -2.29
CSE1YGL238W YDL073WQ07454 984 aa0.78□□□□□ -2.29
CSE1YGL238W APL5Q08951 932 aaKnown RBP0.78□□□□□ -2.29
CSE1YGL238W HFI1Q12060 488 aa0.78□□□□□ -2.29
CSE1YGL238W LCB4Q12246 624 aa0.78□□□□□ -2.29
CSE1YGL238W GIN4Q12263 1142 aa0.78□□□□□ -2.29
CSE1YGL238W AIM44Q99299 758 aa0.78□□□□□ -2.29
CSE1YGL238W CDC25P04821 1589 aa0.77□□□□□ -2.29
CSE1YGL238W SEC15P22224 910 aa0.77□□□□□ -2.29
CSE1YGL238W GSH1P32477 678 aa0.77□□□□□ -2.29
CSE1YGL238W SRP40P32583 406 aaPredicted RBP0.77□□□□□ -2.29
CSE1YGL238W TIF3P34167 436 aaKnown RBP0.77□□□□□ -2.29
CSE1YGL238W OAF3P36023 863 aa0.77□□□□□ -2.29
CSE1YGL238W NOP2P40991 618 aaKnown RBP0.77□□□□□ -2.29
CSE1YGL238W MDV1P47025 714 aa0.77□□□□□ -2.29
CSE1YGL238W TAF4P50105 388 aa0.77□□□□□ -2.29
CSE1YGL238W SNU71P53207 620 aaKnown RBP0.77□□□□□ -2.29
CSE1YGL238W PEF1P53238 335 aa0.77□□□□□ -2.29
CSE1YGL238W RNH70P53331 553 aa0.77□□□□□ -2.29
CSE1YGL238W BOP3P53958 396 aa0.77□□□□□ -2.29
CSE1YGL238W YML119WQ03208 357 aa0.77□□□□□ -2.29
CSE1YGL238W CEF1Q03654 590 aaPredicted RBP0.77□□□□□ -2.29
CSE1YGL238W CAC2Q04199 468 aa0.77□□□□□ -2.29
CSE1YGL238W RPS17AP02407 136 aaKnown RBP0.77□□□□□ -2.29
CSE1YGL238W CHO2P05374 869 aaKnown RBP0.77□□□□□ -2.29
CSE1YGL238W RPS21AP0C0V8 87 aaKnown RBP0.77□□□□□ -2.29
CSE1YGL238W RPS17BP14127 136 aaKnown RBP0.77□□□□□ -2.29
CSE1YGL238W VPS33P20795 691 aa0.77□□□□□ -2.29
CSE1YGL238W CNA1P23287 553 aa0.77□□□□□ -2.29
CSE1YGL238W GDA1P32621 518 aa0.77□□□□□ -2.29
CSE1YGL238W RMA1P36001 430 aaKnown RBP0.77□□□□□ -2.29
CSE1YGL238W FMP46P36141 133 aaKnown RBP0.77□□□□□ -2.29
CSE1YGL238W FTH1P38310 465 aa0.77□□□□□ -2.29
CSE1YGL238W TPA1P40032 644 aaKnown RBP0.77□□□□□ -2.29
CSE1YGL238W PCL6P40038 420 aa0.77□□□□□ -2.29
CSE1YGL238W PXA1P41909 870 aa0.77□□□□□ -2.29
CSE1YGL238W YJL107CP42947 387 aa0.77□□□□□ -2.29
CSE1YGL238W WAR1Q03631 944 aa0.77□□□□□ -2.29
CSE1YGL238W SMA2Q04658 369 aa0.77□□□□□ -2.29
CSE1YGL238W TPO3Q06451 622 aa0.77□□□□□ -2.29
CSE1YGL238W BSC6Q08280 497 aa0.77□□□□□ -2.29
CSE1YGL238W UBX3Q12229 455 aa0.77□□□□□ -2.29
CSE1YGL238W FAB1P34756 2278 aa0.77□□□□□ -2.29
CSE1YGL238W KRE9P39005 276 aa0.76□□□□□ -2.29
CSE1YGL238W GPG1P53130 126 aa0.76□□□□□ -2.29
CSE1YGL238W GFD1Q04839 188 aaKnown RBP0.76□□□□□ -2.29
CSE1YGL238W NTG2Q08214 380 aa0.76□□□□□ -2.29
CSE1YGL238W PUF2Q12221 1075 aaKnown RBP RIP-Chip data0.76□□□□□ -2.29not detected
CSE1YGL238W SES1P07284 462 aaKnown RBP0.76□□□□□ -2.29
CSE1YGL238W ATP12P22135 325 aa0.76□□□□□ -2.29
CSE1YGL238W RRP43P25359 394 aaPredicted RBP0.76□□□□□ -2.29
CSE1YGL238W HES1P35843 434 aa0.76□□□□□ -2.29
CSE1YGL238W SDH8P38345 138 aa0.76□□□□□ -2.29
CSE1YGL238W PPE1P38796 400 aa0.76□□□□□ -2.29
CSE1YGL238W IRC5P43610 853 aa0.76□□□□□ -2.29
CSE1YGL238W RET2P43621 546 aa0.76□□□□□ -2.29
CSE1YGL238W COS12P53053 380 aa0.76□□□□□ -2.29
CSE1YGL238W IMP4P53941 290 aaKnown RBP0.76□□□□□ -2.29
CSE1YGL238W YMR034CQ05131 434 aaPredicted RBP0.76□□□□□ -2.29
CSE1YGL238W YCG1Q06680 1035 aa0.76□□□□□ -2.29
CSE1YGL238W YOR131CQ12486 218 aa0.76□□□□□ -2.29
CSE1YGL238W HMG2P12684 1045 aa0.75□□□□□ -2.29
CSE1YGL238W PRP22P24384 1145 aaKnown RBP0.75□□□□□ -2.29
CSE1YGL238W LOT5P34234 306 aa0.75□□□□□ -2.29
CSE1YGL238W TYS1P36421 394 aaKnown RBP0.75□□□□□ -2.29
CSE1YGL238W YIR016WP40572 265 aa0.75□□□□□ -2.29
CSE1YGL238W AZF1P41696 914 aa0.75□□□□□ -2.29
CSE1YGL238W ARP9Q05123 467 aa0.75□□□□□ -2.29
CSE1YGL238W PFA4Q12006 378 aa0.75□□□□□ -2.29
CSE1YGL238W YBR298C-AQ8TGK4 73 aa0.75□□□□□ -2.29
CSE1YGL238W RPO31P04051 1460 aa0.75□□□□□ -2.29
CSE1YGL238W CIT2P08679 460 aa0.75□□□□□ -2.29
CSE1YGL238W PRP16P15938 1071 aaPredicted RBP0.75□□□□□ -2.29
CSE1YGL238W PPZ1P26570 692 aa0.75□□□□□ -2.29
CSE1YGL238W DHR2P36009 735 aaPredicted RBP0.75□□□□□ -2.29
CSE1YGL238W MAK10Q02197 733 aa0.75□□□□□ -2.29
CSE1YGL238W MFM1Q02783 413 aa0.75□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms