RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	SES1	P07284	462 aa	Known RBP	4.73	□□□□□ -1.65
UBC8	YEL012W	CUP1-1	P0CX80	61 aa		4.73	□□□□□ -1.65
UBC8	YEL012W	CUP1-2	P0CX81	61 aa		4.73	□□□□□ -1.65
UBC8	YEL012W	BET2	P20133	325 aa		4.73	□□□□□ -1.65
UBC8	YEL012W	IMG2	P25642	146 aa	Predicted RBP	4.73	□□□□□ -1.65
UBC8	YEL012W	PRS1	P32895	427 aa	Known RBP	4.73	□□□□□ -1.65
UBC8	YEL012W	POL12	P38121	705 aa	Predicted RBP	4.73	□□□□□ -1.65
UBC8	YEL012W	KTR4	P38131	464 aa		4.73	□□□□□ -1.65
UBC8	YEL012W	MEF2	P39677	819 aa		4.73	□□□□□ -1.65
UBC8	YEL012W	HMF1	P40037	129 aa	Known RBP	4.73	□□□□□ -1.65
UBC8	YEL012W	CCT5	P40413	562 aa	Known RBP	4.73	□□□□□ -1.65
UBC8	YEL012W	TPM2	P40414	161 aa		4.73	□□□□□ -1.65
UBC8	YEL012W	MAF1	P41910	395 aa		4.73	□□□□□ -1.65
UBC8	YEL012W	SHR5	P41912	237 aa		4.73	□□□□□ -1.65
UBC8	YEL012W	CHA4	P43634	648 aa		4.73	□□□□□ -1.65
UBC8	YEL012W	NPY1	P53164	384 aa		4.73	□□□□□ -1.65
UBC8	YEL012W	PUS2	P53167	370 aa		4.73	□□□□□ -1.65
UBC8	YEL012W	SNO2	P53823	222 aa		4.73	□□□□□ -1.65
UBC8	YEL012W	ARP4	P80428	489 aa		4.73	□□□□□ -1.65
UBC8	YEL012W	ECM9	Q02202	377 aa		4.73	□□□□□ -1.65
UBC8	YEL012W	AIM33	Q04516	312 aa		4.73	□□□□□ -1.65
UBC8	YEL012W	ASM4	Q05166	528 aa		4.73	□□□□□ -1.65
UBC8	YEL012W	MMR1	Q06324	491 aa		4.73	□□□□□ -1.65
UBC8	YEL012W	DCS2	Q12123	353 aa		4.73	□□□□□ -1.65
UBC8	YEL012W	DFG16	Q99234	619 aa		4.73	□□□□□ -1.65
UBC8	YEL012W	ADE4	P04046	510 aa	Known RBP	4.72	□□□□□ -1.65
UBC8	YEL012W	PRP4	P20053	465 aa	Known RBP	4.72	□□□□□ -1.65
UBC8	YEL012W	RNR3	P21672	869 aa	Known RBP	4.72	□□□□□ -1.65
UBC8	YEL012W	EMC1	P25574	760 aa		4.72	□□□□□ -1.65
UBC8	YEL012W	HXT6	P39003	570 aa	Known RBP	4.72	□□□□□ -1.65
UBC8	YEL012W	HXT7	P39004	570 aa		4.72	□□□□□ -1.65
UBC8	YEL012W	DOT6	P40059	670 aa	Known RBP	4.72	□□□□□ -1.65
UBC8	YEL012W	DUG1	P43616	481 aa	Known RBP	4.72	□□□□□ -1.65
UBC8	YEL012W	RET2	P43621	546 aa		4.72	□□□□□ -1.65
UBC8	YEL012W	MNN11	P46985	422 aa	Known RBP	4.72	□□□□□ -1.65
UBC8	YEL012W	GTF1	P53260	183 aa	Predicted RBP	4.72	□□□□□ -1.65
UBC8	YEL012W	DIP5	P53388	608 aa		4.72	□□□□□ -1.65
UBC8	YEL012W	TGL2	P54857	326 aa		4.72	□□□□□ -1.65
UBC8	YEL012W	SLU7	Q02775	382 aa	Known RBP	4.72	□□□□□ -1.65
UBC8	YEL012W	ECM16	Q04217	1267 aa	Known RBP	4.72	□□□□□ -1.65
UBC8	YEL012W	YDR341C	Q05506	607 aa	Known RBP	4.72	□□□□□ -1.65
UBC8	YEL012W	SMD2	Q06217	110 aa	Known RBP	4.72	□□□□□ -1.65
UBC8	YEL012W	SNF1	P06782	633 aa	Known RBP	4.71	□□□□□ -1.66
UBC8	YEL012W	HIS5	P07172	385 aa		4.71	□□□□□ -1.66
UBC8	YEL012W	VAS1	P07806	1104 aa	Known RBP	4.71	□□□□□ -1.66
UBC8	YEL012W	RME1	P32338	300 aa	Known RBP	4.71	□□□□□ -1.66
UBC8	YEL012W	PLC1	P32383	869 aa		4.71	□□□□□ -1.66
UBC8	YEL012W	DAL3	P32459	195 aa		4.71	□□□□□ -1.66
UBC8	YEL012W	LIP5	P32875	414 aa		4.71	□□□□□ -1.66
UBC8	YEL012W	CSE2	P33308	149 aa		4.71	□□□□□ -1.66
UBC8	YEL012W	TSA1	P34760	196 aa	Known RBP	4.71	□□□□□ -1.66
UBC8	YEL012W	ATG19	P35193	415 aa		4.71	□□□□□ -1.66
UBC8	YEL012W	MNN4	P36044	1178 aa		4.71	□□□□□ -1.66
UBC8	YEL012W	YHL026C	P38740	315 aa		4.71	□□□□□ -1.66
UBC8	YEL012W	YHR078W	P38799	552 aa		4.71	□□□□□ -1.66
UBC8	YEL012W	BUD16	P39988	312 aa		4.71	□□□□□ -1.66
UBC8	YEL012W	GPP2	P40106	250 aa	Known RBP	4.71	□□□□□ -1.66
UBC8	YEL012W	GPD2	P41911	440 aa	Known RBP	4.71	□□□□□ -1.66
UBC8	YEL012W	SSY5	P47002	699 aa		4.71	□□□□□ -1.66
UBC8	YEL012W	NIT2	P47016	307 aa		4.71	□□□□□ -1.66
UBC8	YEL012W	MRPL22	P53881	309 aa		4.71	□□□□□ -1.66
UBC8	YEL012W	GCN5	Q03330	439 aa		4.71	□□□□□ -1.66
UBC8	YEL012W	PGK1	P00560	416 aa	Known RBP	4.7	□□□□□ -1.66
UBC8	YEL012W	ILV1	P00927	576 aa	Known RBP	4.7	□□□□□ -1.66
UBC8	YEL012W	TUB3	P09734	445 aa	Known RBP	4.7	□□□□□ -1.66
UBC8	YEL012W	APE1	P14904	514 aa		4.7	□□□□□ -1.66
UBC8	YEL012W	PUP3	P25451	205 aa	Known RBP	4.7	□□□□□ -1.66
UBC8	YEL012W	PEP3	P27801	918 aa		4.7	□□□□□ -1.66
UBC8	YEL012W	SEC21	P32074	935 aa	Known RBP	4.7	□□□□□ -1.66
UBC8	YEL012W	EFT1	P32324	842 aa	Known RBP	4.7	□□□□□ -1.66
UBC8	YEL012W	ESL1	P40456	1118 aa		4.7	□□□□□ -1.66
UBC8	YEL012W	YGR153W	P48238	217 aa		4.7	□□□□□ -1.66
UBC8	YEL012W	PCL10	P53124	433 aa		4.7	□□□□□ -1.66
UBC8	YEL012W	MDR1	P53258	950 aa		4.7	□□□□□ -1.66
UBC8	YEL012W	PBP1	P53297	722 aa	Known RBP	4.7	□□□□□ -1.66
UBC8	YEL012W	ZPR1	P53303	486 aa	Known RBP	4.7	□□□□□ -1.66
UBC8	YEL012W	LEE1	Q02799	301 aa	Known RBP	4.7	□□□□□ -1.66
UBC8	YEL012W	TRE2	Q08693	809 aa		4.7	□□□□□ -1.66
UBC8	YEL012W	GPB1	Q08886	897 aa		4.7	□□□□□ -1.66
UBC8	YEL012W	PCD1	Q12524	340 aa		4.7	□□□□□ -1.66
UBC8	YEL012W	RPS21B	Q3E754	87 aa	Known RBP	4.7	□□□□□ -1.66
UBC8	YEL012W	RPS21A	P0C0V8	87 aa	Known RBP	4.69	□□□□□ -1.66
UBC8	YEL012W	ADE2	P21264	571 aa	Known RBP	4.69	□□□□□ -1.66
UBC8	YEL012W	CDC20	P26309	610 aa		4.69	□□□□□ -1.66
UBC8	YEL012W	ARP1	P38696	384 aa		4.69	□□□□□ -1.66
UBC8	YEL012W	MIP6	P38760	659 aa	Known RBP	4.69	□□□□□ -1.66
UBC8	YEL012W	GAA1	P39012	614 aa		4.69	□□□□□ -1.66
UBC8	YEL012W	EAF5	P39995	279 aa		4.69	□□□□□ -1.66
UBC8	YEL012W	MOB1	P40484	314 aa		4.69	□□□□□ -1.66
UBC8	YEL012W	ULP2	P40537	1034 aa	Predicted RBP	4.69	□□□□□ -1.66
UBC8	YEL012W	EPL1	P43572	832 aa		4.69	□□□□□ -1.66
UBC8	YEL012W	ASI2	P53895	289 aa		4.69	□□□□□ -1.66
UBC8	YEL012W	YNL134C	P53912	376 aa	Known RBP	4.69	□□□□□ -1.66
UBC8	YEL012W	YAP6	Q03935	383 aa		4.69	□□□□□ -1.66
UBC8	YEL012W	MUS81	Q04149	632 aa	Predicted RBP	4.69	□□□□□ -1.66
UBC8	YEL012W	PHM6	Q05637	104 aa		4.69	□□□□□ -1.66
UBC8	YEL012W	HFI1	Q12060	488 aa		4.69	□□□□□ -1.66
UBC8	YEL012W	RRD2	Q12461	358 aa		4.69	□□□□□ -1.66
UBC8	YEL012W	APM4	Q99186	491 aa		4.69	□□□□□ -1.66
UBC8	YEL012W	WHI2	P12611	486 aa		4.68	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 36 ms