RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W CIT2P08679 460 aa2.39□□□□□ -2.03
MCD1YDL003W MSH1P25846 959 aa2.39□□□□□ -2.03
MCD1YDL003W CDC60P26637 1090 aaKnown RBP2.39□□□□□ -2.03
MCD1YDL003W TFC3P34111 1160 aa2.39□□□□□ -2.03
MCD1YDL003W GCS1P35197 352 aa2.39□□□□□ -2.03
MCD1YDL003W MCD4P36051 919 aa2.39□□□□□ -2.03
MCD1YDL003W ELF1P36053 145 aa2.39□□□□□ -2.03
MCD1YDL003W YKR051WP36142 418 aa2.39□□□□□ -2.03
MCD1YDL003W ESL2P36168 1195 aa2.39□□□□□ -2.03
MCD1YDL003W PIH1P38768 344 aa2.39□□□□□ -2.03
MCD1YDL003W CAJ1P39101 391 aa2.39□□□□□ -2.03
MCD1YDL003W YIL092WP40497 633 aa2.39□□□□□ -2.03
MCD1YDL003W PCI8P40512 444 aa2.39□□□□□ -2.03
MCD1YDL003W MNT3P40549 630 aa2.39□□□□□ -2.03
MCD1YDL003W HYR1P40581 163 aaKnown RBP2.39□□□□□ -2.03
MCD1YDL003W YRB1P41920 201 aaKnown RBP2.39□□□□□ -2.03
MCD1YDL003W PCL10P53124 433 aa2.39□□□□□ -2.03
MCD1YDL003W ASI1P54074 624 aa2.39□□□□□ -2.03
MCD1YDL003W TRS23Q03784 219 aa2.39□□□□□ -2.03
MCD1YDL003W UBX2Q04228 584 aa2.39□□□□□ -2.03
MCD1YDL003W VPS20Q04272 221 aa2.39□□□□□ -2.03
MCD1YDL003W YCG1Q06680 1035 aa2.39□□□□□ -2.03
MCD1YDL003W ROM2P51862 1356 aaKnown RBP2.39□□□□□ -2.03
MCD1YDL003W PDR15Q04182 1529 aaKnown RBP2.39□□□□□ -2.03
MCD1YDL003W HEM1P09950 548 aaPredicted RBP2.39□□□□□ -2.03
MCD1YDL003W GAL11P19659 1081 aa2.39□□□□□ -2.03
MCD1YDL003W BUD14P27637 709 aa2.39□□□□□ -2.03
MCD1YDL003W SEC6P32844 805 aa2.39□□□□□ -2.03
MCD1YDL003W RAD5P32849 1169 aaPredicted RBP2.39□□□□□ -2.03
MCD1YDL003W NFU1P32860 256 aa2.39□□□□□ -2.03
MCD1YDL003W HEL1P36113 551 aa2.39□□□□□ -2.03
MCD1YDL003W COS111P38308 924 aa2.39□□□□□ -2.03
MCD1YDL003W NPR3P38742 1146 aa2.39□□□□□ -2.03
MCD1YDL003W BEM4P39011 633 aa2.39□□□□□ -2.03
MCD1YDL003W AIM20P40451 204 aa2.39□□□□□ -2.03
MCD1YDL003W TFG2P41896 400 aaPredicted RBP2.39□□□□□ -2.03
MCD1YDL003W NPA3P47122 385 aa2.39□□□□□ -2.03
MCD1YDL003W YNL247WP53852 767 aaKnown RBP2.39□□□□□ -2.03
MCD1YDL003W YFT2Q06676 274 aa2.39□□□□□ -2.03
MCD1YDL003W ISA1Q07821 250 aaPredicted RBP2.39□□□□□ -2.03
MCD1YDL003W PRS5Q12265 496 aaKnown RBP2.39□□□□□ -2.03
MCD1YDL003W IES3Q12345 250 aa2.39□□□□□ -2.03
MCD1YDL003W SUI3P09064 285 aaKnown RBP2.38□□□□□ -2.03
MCD1YDL003W YMR085WP0CF18 432 aa2.38□□□□□ -2.03
MCD1YDL003W TPM1P17536 199 aaKnown RBP2.38□□□□□ -2.03
MCD1YDL003W CDC10P25342 322 aaKnown RBP2.38□□□□□ -2.03
MCD1YDL003W YKR018CP36114 725 aa2.38□□□□□ -2.03
MCD1YDL003W APT1P49435 187 aaKnown RBP2.38□□□□□ -2.03
MCD1YDL003W SNP1Q00916 300 aaPredicted RBP2.38□□□□□ -2.03
MCD1YDL003W NHX1Q04121 633 aa2.38□□□□□ -2.03
MCD1YDL003W GYL1Q04322 720 aa2.38□□□□□ -2.03
MCD1YDL003W ERB1Q04660 807 aaKnown RBP2.38□□□□□ -2.03
MCD1YDL003W COG4Q06096 861 aa2.38□□□□□ -2.03
MCD1YDL003W NKP2Q06162 153 aa2.38□□□□□ -2.03
MCD1YDL003W MMR1Q06324 491 aa2.38□□□□□ -2.03
MCD1YDL003W VPS5Q92331 675 aa2.38□□□□□ -2.03
MCD1YDL003W BRR1Q99177 341 aaPredicted RBP2.38□□□□□ -2.03
MCD1YDL003W TY1B-DR4Q07793 1604 aa2.38□□□□□ -2.03
MCD1YDL003W GCD2P12754 651 aaPredicted RBP2.37□□□□□ -2.03
MCD1YDL003W RPO26P20435 155 aa2.37□□□□□ -2.03
MCD1YDL003W URE2P23202 354 aaKnown RBP2.37□□□□□ -2.03
MCD1YDL003W DPB3P27344 201 aa2.37□□□□□ -2.03
MCD1YDL003W RPC19P28000 142 aaKnown RBP2.37□□□□□ -2.03
MCD1YDL003W KAR9P32526 644 aa2.37□□□□□ -2.03
MCD1YDL003W RPC34P32910 317 aa2.37□□□□□ -2.03
MCD1YDL003W ASK1P35734 292 aa2.37□□□□□ -2.03
MCD1YDL003W PIM1P36775 1133 aa2.37□□□□□ -2.03
MCD1YDL003W APD1P38281 316 aa2.37□□□□□ -2.03
MCD1YDL003W YHR020WP38708 688 aaKnown RBP2.37□□□□□ -2.03
MCD1YDL003W SEC27P41811 889 aaKnown RBP2.37□□□□□ -2.03
MCD1YDL003W LEE1Q02799 301 aaKnown RBP2.37□□□□□ -2.03
MCD1YDL003W KRE28Q04431 385 aa2.37□□□□□ -2.03
MCD1YDL003W YMR111CQ04461 462 aaPredicted RBP2.37□□□□□ -2.03
MCD1YDL003W STE23Q06010 1027 aa2.37□□□□□ -2.03
MCD1YDL003W RRP9Q06506 573 aaKnown RBP2.37□□□□□ -2.03
MCD1YDL003W TSR2Q06672 205 aaKnown RBP2.37□□□□□ -2.03
MCD1YDL003W CMS1Q07897 291 aaKnown RBP2.37□□□□□ -2.03
MCD1YDL003W SLX4Q12098 748 aa2.37□□□□□ -2.03
MCD1YDL003W SAC3P46674 1301 aa2.37□□□□□ -2.03
MCD1YDL003W RPS9BP05755 195 aaKnown RBP2.37□□□□□ -2.03
MCD1YDL003W VAS1P07806 1104 aaKnown RBP2.37□□□□□ -2.03
MCD1YDL003W RPL19AP0CX82 189 aaKnown RBP2.37□□□□□ -2.03
MCD1YDL003W RPL19BP0CX83 189 aaPredicted RBP2.37□□□□□ -2.03
MCD1YDL003W TAL1P15019 335 aaKnown RBP2.37□□□□□ -2.03
MCD1YDL003W KIN82P25341 720 aa2.37□□□□□ -2.03
MCD1YDL003W RPN2P32565 945 aaKnown RBP2.37□□□□□ -2.03
MCD1YDL003W YEL043WP32618 956 aa2.37□□□□□ -2.03
MCD1YDL003W NPL6P32832 435 aa2.37□□□□□ -2.03
MCD1YDL003W SEC66P33754 206 aa2.37□□□□□ -2.03
MCD1YDL003W PTH2P34222 208 aa2.37□□□□□ -2.03
MCD1YDL003W LHS1P36016 881 aa2.37□□□□□ -2.03
MCD1YDL003W LIN1P38852 340 aaPredicted RBP2.37□□□□□ -2.03
MCD1YDL003W SHC1P39000 512 aa2.37□□□□□ -2.03
MCD1YDL003W YIL001WP40560 513 aa2.37□□□□□ -2.03
MCD1YDL003W CAF16P43569 289 aa2.37□□□□□ -2.03
MCD1YDL003W YJL043WP47053 257 aa2.37□□□□□ -2.03
MCD1YDL003W YGL082WP53155 381 aa2.37□□□□□ -2.03
MCD1YDL003W TIM11P81449 96 aaPredicted RBP2.37□□□□□ -2.03
MCD1YDL003W GPD1Q00055 391 aaKnown RBP2.37□□□□□ -2.03
MCD1YDL003W BET4Q00618 327 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms