RNA–Protein interactions for RNA: YCR017C

CWH43, Transcript of Putative sensor/transporter protein involved in cell wall biogenesis, yeast

Gene CWH43, Length 2,862 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CWH43	YCR017C	NGL3	Q03210	505 aa		4.11	□□□□□ -1.75
CWH43	YCR017C	CCE1	Q03702	353 aa		4.11	□□□□□ -1.75
CWH43	YCR017C	THI20	Q08224	551 aa		4.11	□□□□□ -1.75
CWH43	YCR017C	TMA16	Q08687	178 aa		4.11	□□□□□ -1.75
CWH43	YCR017C	DDC1	Q08949	612 aa		4.11	□□□□□ -1.75
CWH43	YCR017C	LPX1	Q12405	387 aa	Known RBP	4.11	□□□□□ -1.75
CWH43	YCR017C	BI3	Q9ZZW7	517 aa		4.11	□□□□□ -1.75
CWH43	YCR017C	TUP1	P16649	713 aa		4.11	□□□□□ -1.75
CWH43	YCR017C	IME1	P21190	360 aa		4.11	□□□□□ -1.75
CWH43	YCR017C	DAL1	P32375	460 aa		4.11	□□□□□ -1.75
CWH43	YCR017C	CDC11	P32458	415 aa		4.11	□□□□□ -1.75
CWH43	YCR017C	SAK1	P38990	1142 aa		4.11	□□□□□ -1.75
CWH43	YCR017C	MSB2	P32334	1306 aa		4.11	□□□□□ -1.75
CWH43	YCR017C	SFL1	P20134	766 aa		4.1	□□□□□ -1.75
CWH43	YCR017C	SEC6	P32844	805 aa		4.1	□□□□□ -1.75
CWH43	YCR017C	MCX1	P38323	520 aa	Predicted RBP	4.1	□□□□□ -1.75
CWH43	YCR017C	PCA1	P38360	1216 aa		4.1	□□□□□ -1.75
CWH43	YCR017C	IST3	P40565	148 aa	Predicted RBP	4.1	□□□□□ -1.75
CWH43	YCR017C	STB4	P50104	949 aa		4.1	□□□□□ -1.75
CWH43	YCR017C	YNR065C	P53751	1116 aa		4.1	□□□□□ -1.75
CWH43	YCR017C	VPS38	Q05919	439 aa		4.1	□□□□□ -1.75
CWH43	YCR017C	THI7	Q05998	598 aa		4.1	□□□□□ -1.75
CWH43	YCR017C	ADY3	Q07732	790 aa		4.1	□□□□□ -1.75
CWH43	YCR017C	YPL216W	Q08964	1102 aa		4.1	□□□□□ -1.75
CWH43	YCR017C	RPS14A	P06367	137 aa	Known RBP	4.1	□□□□□ -1.75
CWH43	YCR017C	TUB3	P09734	445 aa	Known RBP	4.1	□□□□□ -1.75
CWH43	YCR017C	EMC1	P25574	760 aa		4.1	□□□□□ -1.75
CWH43	YCR017C	DBF4	P32325	704 aa		4.1	□□□□□ -1.75
CWH43	YCR017C	RPC25	P35718	212 aa		4.1	□□□□□ -1.75
CWH43	YCR017C	FSH1	P38777	243 aa	Known RBP	4.1	□□□□□ -1.75
CWH43	YCR017C	SPT8	P38915	602 aa		4.1	□□□□□ -1.75
CWH43	YCR017C	DUN1	P39009	513 aa		4.1	□□□□□ -1.75
CWH43	YCR017C	CCT6	P39079	546 aa		4.1	□□□□□ -1.75
CWH43	YCR017C	RPS14B	P39516	138 aa	Known RBP	4.1	□□□□□ -1.75
CWH43	YCR017C	RPH1	P39956	796 aa		4.1	□□□□□ -1.75
CWH43	YCR017C	PRK1	P40494	810 aa		4.1	□□□□□ -1.75
CWH43	YCR017C	YIR007W	P40566	764 aa		4.1	□□□□□ -1.75
CWH43	YCR017C	BST1	P43571	1029 aa		4.1	□□□□□ -1.75
CWH43	YCR017C	DLD2	P46681	530 aa	Known RBP	4.1	□□□□□ -1.75
CWH43	YCR017C	BTN2	P53286	410 aa		4.1	□□□□□ -1.75
CWH43	YCR017C	JJJ1	P53863	590 aa		4.1	□□□□□ -1.75
CWH43	YCR017C	GCN5	Q03330	439 aa		4.1	□□□□□ -1.75
CWH43	YCR017C	HOS1	Q12214	470 aa		4.1	□□□□□ -1.75
CWH43	YCR017C	WHI5	Q12416	295 aa		4.1	□□□□□ -1.75
CWH43	YCR017C	EFG1	Q3E705	233 aa	Known RBP	4.1	□□□□□ -1.75
CWH43	YCR017C	IZH4	Q99393	312 aa		4.1	□□□□□ -1.75
CWH43	YCR017C	ENO1	P00924	437 aa	Known RBP	4.09	□□□□□ -1.75
CWH43	YCR017C	KIP2	P28743	706 aa		4.09	□□□□□ -1.75
CWH43	YCR017C	SLD2	P34252	453 aa		4.09	□□□□□ -1.75
CWH43	YCR017C	EXO5	P38289	585 aa		4.09	□□□□□ -1.75
CWH43	YCR017C	MSR1	P38714	643 aa		4.09	□□□□□ -1.75
CWH43	YCR017C	AIM18	P38884	321 aa		4.09	□□□□□ -1.75
CWH43	YCR017C	RIM21	P48565	533 aa		4.09	□□□□□ -1.75
CWH43	YCR017C	PRP24	P49960	444 aa	Known RBP	4.09	□□□□□ -1.75
CWH43	YCR017C	ENT5	Q03769	411 aa	Known RBP	4.09	□□□□□ -1.75
CWH43	YCR017C	YHM2	Q04013	314 aa		4.09	□□□□□ -1.75
CWH43	YCR017C	THI21	Q08975	551 aa		4.09	□□□□□ -1.75
CWH43	YCR017C	ARP7	Q12406	477 aa		4.09	□□□□□ -1.75
CWH43	YCR017C	YOR338W	Q99326	363 aa		4.09	□□□□□ -1.75
CWH43	YCR017C	AAT2	P23542	418 aa	Known RBP	4.09	□□□□□ -1.75
CWH43	YCR017C	YIH1	P25637	258 aa		4.09	□□□□□ -1.75
CWH43	YCR017C	HEM12	P32347	362 aa	Predicted RBP	4.09	□□□□□ -1.75
CWH43	YCR017C	SRB4	P32569	687 aa		4.09	□□□□□ -1.75
CWH43	YCR017C	YKL097C	P34245	136 aa		4.09	□□□□□ -1.75
CWH43	YCR017C	SEG2	P34250	1132 aa		4.09	□□□□□ -1.75
CWH43	YCR017C	MIC60	P36112	540 aa		4.09	□□□□□ -1.75
CWH43	YCR017C	MMM1	P41800	426 aa		4.09	□□□□□ -1.75
CWH43	YCR017C	VTC4	P47075	721 aa		4.09	□□□□□ -1.75
CWH43	YCR017C	RFX1	P48743	811 aa		4.09	□□□□□ -1.75
CWH43	YCR017C	YGR283C	P53336	341 aa	Predicted RBP	4.09	□□□□□ -1.75
CWH43	YCR017C	CAF120	P53836	1060 aa		4.09	□□□□□ -1.75
CWH43	YCR017C	CDC55	Q00362	526 aa		4.09	□□□□□ -1.75
CWH43	YCR017C	TGL5	Q12043	749 aa		4.09	□□□□□ -1.75
CWH43	YCR017C	SFI1	Q12369	946 aa		4.09	□□□□□ -1.75
CWH43	YCR017C	SIR1	P21691	654 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	YEL043W	P32618	956 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	STE13	P33894	931 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	YKL050C	P35736	922 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	JNM1	P36224	373 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	SIF2	P38262	535 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	HSL7	P38274	827 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	BAT1	P38891	393 aa	Known RBP	4.08	□□□□□ -1.76
CWH43	YCR017C	YPR003C	P53394	754 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	PRM1	P53835	661 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	ORC3	P54790	616 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	YMR206W	Q03695	313 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	JIP5	Q06214	492 aa	Predicted RBP	4.08	□□□□□ -1.76
CWH43	YCR017C	TPO1	Q07824	586 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	AAD15	Q08361	143 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	RIO1	Q12196	484 aa	Known RBP	4.08	□□□□□ -1.76
CWH43	YCR017C	FRT1	Q99332	602 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	MDM35	O60200	86 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	MNE1	P24720	663 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	HEM3	P28789	327 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	SRP68	P38687	599 aa	Known RBP	4.08	□□□□□ -1.76
CWH43	YCR017C	TCD1	P38756	429 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	QNS1	P38795	714 aa	Known RBP	4.08	□□□□□ -1.76
CWH43	YCR017C	PIK1	P39104	1066 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	EDC3	P39998	551 aa	Known RBP	4.08	□□□□□ -1.76
CWH43	YCR017C	RTS3	P53289	263 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms