RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C YJU2P28320 278 aaPredicted RBP5.88□□□□□ -1.47
PDB1YBR221C HMX1P32339 317 aa5.88□□□□□ -1.47
PDB1YBR221C MRPL40P36534 297 aa5.88□□□□□ -1.47
PDB1YBR221C PNT1P38969 423 aa5.88□□□□□ -1.47
PDB1YBR221C PIK1P39104 1066 aa5.88□□□□□ -1.47
PDB1YBR221C GUS1P46655 708 aaKnown RBP RIP-Chip data5.88□□□□□ -1.47not detected
PDB1YBR221C STU2P46675 888 aa5.88□□□□□ -1.47
PDB1YBR221C CTF18P49956 741 aa5.88□□□□□ -1.47
PDB1YBR221C CGR1P53188 120 aa5.88□□□□□ -1.47
PDB1YBR221C PEX13P80667 386 aa5.88□□□□□ -1.47
PDB1YBR221C GIS4Q04233 774 aa5.88□□□□□ -1.47
PDB1YBR221C RSC3Q06639 885 aa5.88□□□□□ -1.47
PDB1YBR221C HFI1Q12060 488 aa5.88□□□□□ -1.47
PDB1YBR221C PSY3Q12318 242 aa5.88□□□□□ -1.47
PDB1YBR221C APM4Q99186 491 aa5.88□□□□□ -1.47
PDB1YBR221C SSK22P25390 1331 aaPredicted RBP5.88□□□□□ -1.47
PDB1YBR221C SUP35P05453 685 aaKnown RBP5.87□□□□□ -1.47
PDB1YBR221C TPK1P06244 397 aa5.87□□□□□ -1.47
PDB1YBR221C CLN1P20437 546 aa5.87□□□□□ -1.47
PDB1YBR221C PRE8P23639 250 aa5.87□□□□□ -1.47
PDB1YBR221C PHO3P24031 467 aa5.87□□□□□ -1.47
PDB1YBR221C MSP1P28737 362 aa5.87□□□□□ -1.47
PDB1YBR221C DOA4P32571 926 aa5.87□□□□□ -1.47
PDB1YBR221C KAP122P32767 1081 aa5.87□□□□□ -1.47
PDB1YBR221C AFG2P32794 780 aa5.87□□□□□ -1.47
PDB1YBR221C GCS1P35197 352 aa5.87□□□□□ -1.47
PDB1YBR221C COS111P38308 924 aa5.87□□□□□ -1.47
PDB1YBR221C HXT6P39003 570 aaKnown RBP5.87□□□□□ -1.47
PDB1YBR221C HXT7P39004 570 aa5.87□□□□□ -1.47
PDB1YBR221C PSF2P40359 213 aa5.87□□□□□ -1.47
PDB1YBR221C YIL092WP40497 633 aa5.87□□□□□ -1.47
PDB1YBR221C THI6P41835 540 aa5.87□□□□□ -1.47
PDB1YBR221C GCN20P43535 752 aaKnown RBP5.87□□□□□ -1.47
PDB1YBR221C TAD1P53065 400 aa5.87□□□□□ -1.47
PDB1YBR221C CPR6P53691 371 aaKnown RBP5.87□□□□□ -1.47
PDB1YBR221C YNL050CP53952 270 aa5.87□□□□□ -1.47
PDB1YBR221C NOG1Q02892 647 aaKnown RBP5.87□□□□□ -1.47
PDB1YBR221C ERB1Q04660 807 aaKnown RBP5.87□□□□□ -1.47
PDB1YBR221C KAP95Q06142 861 aaKnown RBP5.87□□□□□ -1.47
PDB1YBR221C ETT1Q08421 412 aaKnown RBP5.87□□□□□ -1.47
PDB1YBR221C HER1Q12276 1246 aa5.87□□□□□ -1.47
PDB1YBR221C ZRT2Q12436 422 aa5.87□□□□□ -1.47
PDB1YBR221C LYS2P07702 1392 aa5.86□□□□□ -1.47
PDB1YBR221C VAS1P07806 1104 aaKnown RBP5.86□□□□□ -1.47
PDB1YBR221C YML002WP0CF17 737 aa5.86□□□□□ -1.47
PDB1YBR221C HEM13P11353 328 aaKnown RBP5.86□□□□□ -1.47
PDB1YBR221C TRK1P12685 1235 aa5.86□□□□□ -1.47
PDB1YBR221C CLC1P17891 233 aa5.86□□□□□ -1.47
PDB1YBR221C SYP1P25623 870 aaKnown RBP5.86□□□□□ -1.47
PDB1YBR221C RME1P32338 300 aaKnown RBP5.86□□□□□ -1.47
PDB1YBR221C MDL2P33311 773 aa5.86□□□□□ -1.47
PDB1YBR221C ECM4P36156 370 aa5.86□□□□□ -1.47
PDB1YBR221C DAD2P36162 133 aa5.86□□□□□ -1.47
PDB1YBR221C PUG1P40100 303 aa5.86□□□□□ -1.47
PDB1YBR221C SDS3P40505 327 aa5.86□□□□□ -1.47
PDB1YBR221C SPO22P40511 975 aa5.86□□□□□ -1.47
PDB1YBR221C SET4P42948 560 aa5.86□□□□□ -1.47
PDB1YBR221C TCB2P48231 1178 aa5.86□□□□□ -1.47
PDB1YBR221C YGR054WP53235 642 aaKnown RBP5.86□□□□□ -1.47
PDB1YBR221C VPS75P53853 264 aa5.86□□□□□ -1.47
PDB1YBR221C ATP25Q03153 612 aa5.86□□□□□ -1.47
PDB1YBR221C GTB1Q04924 702 aa5.86□□□□□ -1.47
PDB1YBR221C DON1Q05610 365 aa5.86□□□□□ -1.47
PDB1YBR221C MRD1Q06106 887 aaKnown RBP5.86□□□□□ -1.47
PDB1YBR221C YLR456WQ06199 204 aa5.86□□□□□ -1.47
PDB1YBR221C TFC6Q06339 672 aa5.86□□□□□ -1.47
PDB1YBR221C OMS1Q06668 471 aa5.86□□□□□ -1.47
PDB1YBR221C UTP4Q06679 776 aaKnown RBP5.86□□□□□ -1.47
PDB1YBR221C RRT8Q08219 342 aa5.86□□□□□ -1.47
PDB1YBR221C TAF3Q12297 353 aa5.86□□□□□ -1.47
PDB1YBR221C GLE1Q12315 538 aa5.86□□□□□ -1.47
PDB1YBR221C PFK27Q12471 397 aaPredicted RBP5.86□□□□□ -1.47
PDB1YBR221C SEC53P07283 254 aaKnown RBP5.85□□□□□ -1.47
PDB1YBR221C DAT1P13483 248 aaKnown RBP5.85□□□□□ -1.47
PDB1YBR221C MDH1P17505 334 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
PDB1YBR221C AFT1P22149 690 aa5.85□□□□□ -1.47
PDB1YBR221C PRP22P24384 1145 aaKnown RBP5.85□□□□□ -1.47
PDB1YBR221C CLB1P24868 471 aa5.85□□□□□ -1.47
PDB1YBR221C SPS22P25380 463 aa5.85□□□□□ -1.47
PDB1YBR221C DUR3P33413 735 aa5.85□□□□□ -1.47
PDB1YBR221C STB6P36085 766 aa5.85□□□□□ -1.47
PDB1YBR221C STV1P37296 890 aa5.85□□□□□ -1.47
PDB1YBR221C RRM3P38766 723 aa5.85□□□□□ -1.47
PDB1YBR221C SSU1P41930 458 aa5.85□□□□□ -1.47
PDB1YBR221C YFL052WP43551 465 aa5.85□□□□□ -1.47
PDB1YBR221C FET5P43561 622 aa5.85□□□□□ -1.47
PDB1YBR221C PUS4P48567 403 aaKnown RBP5.85□□□□□ -1.47
PDB1YBR221C ALT1P52893 592 aa5.85□□□□□ -1.47
PDB1YBR221C MLC1P53141 149 aa5.85□□□□□ -1.47
PDB1YBR221C BSC5P53755 489 aa5.85□□□□□ -1.47
PDB1YBR221C YNL144CP53907 740 aa5.85□□□□□ -1.47
PDB1YBR221C EGD1Q02642 157 aaKnown RBP5.85□□□□□ -1.47
PDB1YBR221C LCD1Q04377 747 aa5.85□□□□□ -1.47
PDB1YBR221C SNO4Q04902 237 aa5.85□□□□□ -1.47
PDB1YBR221C YPQ2Q06328 317 aa5.85□□□□□ -1.47
PDB1YBR221C ARR1Q06596 294 aa5.85□□□□□ -1.47
PDB1YBR221C GAS5Q08193 484 aa5.85□□□□□ -1.47
PDB1YBR221C HSP33Q08914 237 aaKnown RBP5.85□□□□□ -1.47
PDB1YBR221C HSP32Q08992 237 aa5.85□□□□□ -1.47
PDB1YBR221C HUA2Q12134 243 aa5.85□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms