RNA–Protein interactions for RNA: YBR030W

RKM3, Transcript of Ribosomal lysine methyltransferase, yeast

Gene RKM3, Length 1,659 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RKM3	YBR030W	ARC1	P46672	376 aa	Known RBP	4.63	□□□□□ -1.67
RKM3	YBR030W	MRX6	P48564	524 aa		4.63	□□□□□ -1.67
RKM3	YBR030W	COX18	P53239	316 aa		4.63	□□□□□ -1.67
RKM3	YBR030W	SPO1	P53541	631 aa		4.63	□□□□□ -1.67
RKM3	YBR030W	RPT6	Q01939	405 aa	Known RBP	4.63	□□□□□ -1.67
RKM3	YBR030W	ATG21	Q02887	496 aa		4.63	□□□□□ -1.67
RKM3	YBR030W	ENT4	Q07872	247 aa		4.63	□□□□□ -1.67
RKM3	YBR030W	MED7	Q08278	222 aa		4.63	□□□□□ -1.67
RKM3	YBR030W	HUA2	Q12134	243 aa		4.63	□□□□□ -1.67
RKM3	YBR030W	SUL2	Q12325	893 aa		4.63	□□□□□ -1.67
RKM3	YBR030W	SFI1	Q12369	946 aa		4.63	□□□□□ -1.67
RKM3	YBR030W	RTN2	Q12443	393 aa		4.63	□□□□□ -1.67
RKM3	YBR030W	YOR111W	Q99210	232 aa		4.63	□□□□□ -1.67
RKM3	YBR030W	YLR302C	O13544	120 aa		4.62	□□□□□ -1.67
RKM3	YBR030W	CYB2	P00175	591 aa		4.62	□□□□□ -1.67
RKM3	YBR030W	SEC53	P07283	254 aa	Known RBP	4.62	□□□□□ -1.67
RKM3	YBR030W	CDC24	P11433	854 aa	Predicted RBP	4.62	□□□□□ -1.67
RKM3	YBR030W	RNR1	P21524	888 aa	Known RBP	4.62	□□□□□ -1.67
RKM3	YBR030W	PRP22	P24384	1145 aa	Known RBP	4.62	□□□□□ -1.67
RKM3	YBR030W	ERG6	P25087	383 aa	Known RBP	4.62	□□□□□ -1.67
RKM3	YBR030W	RPS7A	P26786	190 aa	Known RBP	4.62	□□□□□ -1.67
RKM3	YBR030W	ORC2	P32833	620 aa		4.62	□□□□□ -1.67
RKM3	YBR030W	UTP9	P38882	575 aa	Known RBP	4.62	□□□□□ -1.67
RKM3	YBR030W	CRG1	P38892	291 aa	RIP-Chip data	4.62	□□□□□ -1.67	not detected
RKM3	YBR030W	PSD1	P39006	500 aa		4.62	□□□□□ -1.67
RKM3	YBR030W	VFA1	P40080	203 aa		4.62	□□□□□ -1.67
RKM3	YBR030W	LTP1	P40347	161 aa		4.62	□□□□□ -1.67
RKM3	YBR030W	NOP9	P47077	666 aa	Known RBP	4.62	□□□□□ -1.67
RKM3	YBR030W	DSD1	P53095	428 aa		4.62	□□□□□ -1.67
RKM3	YBR030W	YDR286C	Q05530	114 aa		4.62	□□□□□ -1.67
RKM3	YBR030W	VAM6	Q07468	1049 aa		4.62	□□□□□ -1.67
RKM3	YBR030W	ADY3	Q07732	790 aa		4.62	□□□□□ -1.67
RKM3	YBR030W	GPB1	Q08886	897 aa		4.62	□□□□□ -1.67
RKM3	YBR030W	NBP2	Q12163	236 aa		4.62	□□□□□ -1.67
RKM3	YBR030W	YBR126W-A	Q8TGU7	68 aa		4.62	□□□□□ -1.67
RKM3	YBR030W	ECM3	Q99252	613 aa		4.62	□□□□□ -1.67
RKM3	YBR030W	TY2A-LR1	P0C2J4	438 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	TY2A-F	P0CX61	438 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	TY2A-GR2	P0CX62	438 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	TY2A-C	P25383	438 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	PRP45	P28004	379 aa	Predicted RBP	4.61	□□□□□ -1.67
RKM3	YBR030W	SEC21	P32074	935 aa	Known RBP	4.61	□□□□□ -1.67
RKM3	YBR030W	APT2	P36973	181 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	YBR259W	P38338	688 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	SFB3	P38810	929 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	ECM1	P39715	212 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	FTR1	P40088	404 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	BTN2	P53286	410 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	CSL4	P53859	292 aa	Predicted RBP	4.61	□□□□□ -1.67
RKM3	YBR030W	ZDS2	P54786	942 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	NGL3	Q03210	505 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	PKH1	Q03407	766 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	TY2A-DR2	Q03483	438 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	VPS64	Q03944	604 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	RCO1	Q04779	684 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	YLR345W	Q06137	509 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	TPO1	Q07824	586 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	TY2A-B	Q12260	438 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	TY2A-OR2	Q12293	438 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	TY2A-DR1	Q12392	438 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	TY2A-OR1	Q12439	438 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	TY2A-DR3	Q99303	438 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	GAL10	P04397	699 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	TUP1	P16649	713 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	KIN82	P25341	720 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	EHT1	P38295	451 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	STB5	P38699	743 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	IST3	P40565	148 aa	Predicted RBP	4.61	□□□□□ -1.67
RKM3	YBR030W	ATP22	P50273	684 aa	Predicted RBP	4.61	□□□□□ -1.67
RKM3	YBR030W	REG1	Q00816	1014 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	ARP9	Q05123	467 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	AIM6	Q07716	390 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	CTI6	Q08923	506 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	PGC1	Q08959	321 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	NMD4	Q12129	218 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	LPX1	Q12405	387 aa	Known RBP	4.61	□□□□□ -1.67
RKM3	YBR030W	POM34	Q12445	299 aa		4.61	□□□□□ -1.67
RKM3	YBR030W	CYC1	P00044	109 aa	Predicted RBP	4.6	□□□□□ -1.67
RKM3	YBR030W	RPS9B	P05755	195 aa	Known RBP	4.6	□□□□□ -1.67
RKM3	YBR030W	PMS1	P14242	873 aa		4.6	□□□□□ -1.67
RKM3	YBR030W	YCK1	P23291	538 aa		4.6	□□□□□ -1.67
RKM3	YBR030W	LCB1	P25045	558 aa	Known RBP	4.6	□□□□□ -1.67
RKM3	YBR030W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
RKM3	YBR030W	YJL068C	P40363	299 aa		4.6	□□□□□ -1.67
RKM3	YBR030W	UBP7	P40453	1071 aa		4.6	□□□□□ -1.67
RKM3	YBR030W	TAM41	P53230	385 aa		4.6	□□□□□ -1.67
RKM3	YBR030W	RAD30	Q04049	632 aa		4.6	□□□□□ -1.67
RKM3	YBR030W	SWM1	Q12379	170 aa		4.6	□□□□□ -1.67
RKM3	YBR030W	HRP1	Q99383	534 aa	Known RBP	4.6	□□□□□ -1.67
RKM3	YBR030W	PET122	P10355	254 aa		4.59	□□□□□ -1.67
RKM3	YBR030W	LIP5	P32875	414 aa		4.59	□□□□□ -1.67
RKM3	YBR030W	YKL100C	P34248	587 aa		4.59	□□□□□ -1.67
RKM3	YBR030W	RXT2	P38255	430 aa		4.59	□□□□□ -1.67
RKM3	YBR030W	FLC2	P39719	783 aa		4.59	□□□□□ -1.67
RKM3	YBR030W	GET2	P40056	285 aa		4.59	□□□□□ -1.67
RKM3	YBR030W	ZAP1	P47043	880 aa		4.59	□□□□□ -1.67
RKM3	YBR030W	TEX1	P53851	422 aa	Known RBP	4.59	□□□□□ -1.67
RKM3	YBR030W	SLU7	Q02775	382 aa	Known RBP	4.59	□□□□□ -1.67
RKM3	YBR030W	AIM41	Q12032	185 aa		4.59	□□□□□ -1.67
RKM3	YBR030W	TUF1	P02992	437 aa	Known RBP	4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms