RNA–Protein interactions for RNA: Q0140

VAR1, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene VAR1, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAR1	Q0140	YGR153W	P48238	217 aa		4.12	□□□□□ -1.75
VAR1	Q0140	SMA2	Q04658	369 aa		4.12	□□□□□ -1.75
VAR1	Q0140	TUF1	P02992	437 aa	Known RBP	4.11	□□□□□ -1.75
VAR1	Q0140	HMG2	P12684	1045 aa		4.11	□□□□□ -1.75
VAR1	Q0140	VPS33	P20795	691 aa		4.11	□□□□□ -1.75
VAR1	Q0140	COQ3	P27680	312 aa		4.1	□□□□□ -1.75
VAR1	Q0140	MF(ALPHA)2	P32435	120 aa		4.1	□□□□□ -1.75
VAR1	Q0140	ECM9	Q02202	377 aa		4.1	□□□□□ -1.75
VAR1	Q0140	CYK3	Q07533	885 aa		4.1	□□□□□ -1.75
VAR1	Q0140	YMR230W-A	Q3E7B5	62 aa		4.1	□□□□□ -1.75
VAR1	Q0140	YPK1	P12688	680 aa	Known RBP	4.09	□□□□□ -1.75
VAR1	Q0140	CDC26	P14724	124 aa		4.09	□□□□□ -1.75
VAR1	Q0140	AIM17	P23180	465 aa	Known RBP	4.09	□□□□□ -1.75
VAR1	Q0140	YCR043C	P25361	127 aa		4.09	□□□□□ -1.75
VAR1	Q0140	PRP19	P32523	503 aa	Known RBP	4.09	□□□□□ -1.75
VAR1	Q0140	OAF3	P36023	863 aa		4.09	□□□□□ -1.75
VAR1	Q0140	FMP46	P36141	133 aa	Known RBP	4.09	□□□□□ -1.75
VAR1	Q0140	RTT107	P38850	1070 aa		4.09	□□□□□ -1.75
VAR1	Q0140	VID28	P40547	921 aa		4.09	□□□□□ -1.75
VAR1	Q0140	HFI1	Q12060	488 aa		4.09	□□□□□ -1.75
VAR1	Q0140	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
VAR1	Q0140	FAT1	P38225	669 aa		4.08	□□□□□ -1.76
VAR1	Q0140	MDV1	P47025	714 aa		4.08	□□□□□ -1.76
VAR1	Q0140	YHM2	Q04013	314 aa		4.08	□□□□□ -1.76
VAR1	Q0140	CRT10	Q08226	957 aa		4.08	□□□□□ -1.76
VAR1	Q0140	PNO1	Q99216	274 aa	Known RBP	4.08	□□□□□ -1.76
VAR1	Q0140	CET1	O13297	549 aa	Predicted RBP	4.07	□□□□□ -1.76
VAR1	Q0140	RPL8A	P17076	256 aa	Known RBP	4.07	□□□□□ -1.76
VAR1	Q0140	SFP1	P32432	683 aa		4.07	□□□□□ -1.76
VAR1	Q0140	YIL152W	P40455	235 aa		4.07	□□□□□ -1.76
VAR1	Q0140	SKP2	P42843	763 aa		4.07	□□□□□ -1.76
VAR1	Q0140	YNL058C	P53947	316 aa		4.07	□□□□□ -1.76
VAR1	Q0140	APM4	Q99186	491 aa		4.07	□□□□□ -1.76
VAR1	Q0140	BET2	P20133	325 aa		4.06	□□□□□ -1.76
VAR1	Q0140	GND1	P38720	489 aa	Known RBP	4.06	□□□□□ -1.76
VAR1	Q0140	MTG2	P38860	518 aa		4.06	□□□□□ -1.76
VAR1	Q0140	YIR016W	P40572	265 aa		4.06	□□□□□ -1.76
VAR1	Q0140	RAD33	Q04231	177 aa		4.06	□□□□□ -1.76
VAR1	Q0140	YMR317W	Q04893	1140 aa		4.06	□□□□□ -1.76
VAR1	Q0140	NOP14	Q99207	810 aa	Known RBP	4.06	□□□□□ -1.76
VAR1	Q0140	MAK32	P23060	363 aa		4.05	□□□□□ -1.76
VAR1	Q0140	CDC5	P32562	705 aa		4.05	□□□□□ -1.76
VAR1	Q0140	DSS4	P32601	143 aa		4.05	□□□□□ -1.76
VAR1	Q0140	TES1	P41903	349 aa	Known RBP	4.05	□□□□□ -1.76
VAR1	Q0140	GZF3	P42944	551 aa	Known RBP	4.05	□□□□□ -1.76
VAR1	Q0140	BOP3	P53958	396 aa		4.05	□□□□□ -1.76
VAR1	Q0140	PTA1	Q01329	785 aa	Predicted RBP	4.05	□□□□□ -1.76
VAR1	Q0140	SNU56	Q03782	492 aa	Known RBP	4.05	□□□□□ -1.76
VAR1	Q0140	DGR2	P32330	852 aa		4.04	□□□□□ -1.76
VAR1	Q0140	RPT3	P33298	428 aa	Known RBP	4.04	□□□□□ -1.76
VAR1	Q0140	RMA1	P36001	430 aa	Known RBP	4.04	□□□□□ -1.76
VAR1	Q0140	FTH1	P38310	465 aa		4.04	□□□□□ -1.76
VAR1	Q0140	IMD2	P38697	523 aa	Known RBP	4.04	□□□□□ -1.76
VAR1	Q0140	IMD3	P50095	523 aa	Known RBP	4.04	□□□□□ -1.76
VAR1	Q0140	YNL092W	P53934	400 aa		4.04	□□□□□ -1.76
VAR1	Q0140	MTD1	Q02046	320 aa	Known RBP	4.04	□□□□□ -1.76
VAR1	Q0140	ATX2	Q12067	313 aa		4.04	□□□□□ -1.76
VAR1	Q0140	UBX3	Q12229	455 aa		4.04	□□□□□ -1.76
VAR1	Q0140	RPS21A	P0C0V8	87 aa	Known RBP	4.03	□□□□□ -1.76
VAR1	Q0140	PCK1	P10963	549 aa		4.03	□□□□□ -1.76
VAR1	Q0140	GDA1	P32621	518 aa		4.03	□□□□□ -1.76
VAR1	Q0140	EXO84	P38261	753 aa		4.03	□□□□□ -1.76
VAR1	Q0140	SQS1	P53866	767 aa	Known RBP	4.03	□□□□□ -1.76
VAR1	Q0140	SEC12	P11655	471 aa		4.02	□□□□□ -1.77
VAR1	Q0140	TYS1	P36421	394 aa	Known RBP	4.02	□□□□□ -1.77
VAR1	Q0140	FAA2	P39518	744 aa		4.02	□□□□□ -1.77
VAR1	Q0140	CIN1	P40987	1014 aa		4.02	□□□□□ -1.77
VAR1	Q0140	CIR1	P42940	261 aa		4.02	□□□□□ -1.77
VAR1	Q0140	ILS1	P09436	1072 aa	Known RBP	4.01	□□□□□ -1.77
VAR1	Q0140	DID4	P36108	232 aa		4.01	□□□□□ -1.77
VAR1	Q0140	PEF1	P53238	335 aa		4.01	□□□□□ -1.77
VAR1	Q0140	MTQ2	Q03920	221 aa	Predicted RBP	4.01	□□□□□ -1.77
VAR1	Q0140	GAL4	P04386	881 aa		4	□□□□□ -1.77
VAR1	Q0140	TOM71	P38825	639 aa	Known RBP	4	□□□□□ -1.77
VAR1	Q0140	MNN11	P46985	422 aa	Known RBP	4	□□□□□ -1.77
VAR1	Q0140	VTC3	Q02725	835 aa		4	□□□□□ -1.77
VAR1	Q0140	DSE3	Q08729	430 aa		4	□□□□□ -1.77
VAR1	Q0140	YTM1	Q12024	460 aa	Predicted RBP	4	□□□□□ -1.77
VAR1	Q0140	AEP2	P22136	580 aa		3.99	□□□□□ -1.77
VAR1	Q0140	HXT4	P32467	576 aa		3.99	□□□□□ -1.77
VAR1	Q0140	SDH8	P38345	138 aa		3.99	□□□□□ -1.77
VAR1	Q0140	MNN1	P39106	762 aa		3.99	□□□□□ -1.77
VAR1	Q0140	LAS21	P40367	830 aa		3.99	□□□□□ -1.77
VAR1	Q0140	THI73	Q07904	523 aa		3.99	□□□□□ -1.77
VAR1	Q0140	CBP3	P21560	335 aa		3.98	□□□□□ -1.77
VAR1	Q0140	SCO2	P38072	301 aa		3.98	□□□□□ -1.77
VAR1	Q0140	HLJ1	P48353	224 aa		3.98	□□□□□ -1.77
VAR1	Q0140	COG2	P53271	262 aa		3.98	□□□□□ -1.77
VAR1	Q0140	GET3	Q12154	354 aa	Known RBP	3.98	□□□□□ -1.77
VAR1	Q0140	RRP14	P36080	434 aa	Known RBP	3.97	□□□□□ -1.77
VAR1	Q0140	RRP8	P38961	392 aa	Known RBP	3.97	□□□□□ -1.77
VAR1	Q0140	YOR389W	Q08912	624 aa		3.97	□□□□□ -1.77
VAR1	Q0140	CHO2	P05374	869 aa	Known RBP	3.96	□□□□□ -1.78
VAR1	Q0140	RRP43	P25359	394 aa	Predicted RBP	3.96	□□□□□ -1.78
VAR1	Q0140	KES1	P35844	434 aa	Known RBP	3.96	□□□□□ -1.78
VAR1	Q0140	HOS2	P53096	452 aa	Predicted RBP	3.96	□□□□□ -1.78
VAR1	Q0140	NGL1	Q08213	363 aa	Known RBP	3.96	□□□□□ -1.78
VAR1	Q0140	LYS21	Q12122	440 aa	Known RBP	3.96	□□□□□ -1.78
VAR1	Q0140	ADR1	P07248	1323 aa		3.95	□□□□□ -1.78
VAR1	Q0140	RTC1	Q08281	1341 aa		3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 98.6 ms