RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 CCNB3Q8WWL7 1395 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 MAP3K5Q99683 1374 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 TMEM238LA0A1B0GVL6 79 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 ATXN7O15265 892 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 PPM1GO15355 546 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 RARAP10276 462 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 HOXD8P13378 290 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 RHOQP17081 205 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 GBP2P32456 591 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 EIF4A3P38919 411 aaKnown RBP6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 FCGRTP55899 365 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 PLAURQ03405 335 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 NCAPG2Q86XI2 1143 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 C16orf71Q8IYS4 520 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 C3orf58Q8NDZ4 430 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 MKL1Q969V6 931 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 MRFAP1L1Q96HT8 127 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 ABHD8Q96I13 439 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 GMCL1Q96IK5 515 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 RUBCNLQ9H714 662 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 LIN7BQ9HAP6 207 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 STK32BQ9NY57 414 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 SALL4Q9UJQ4 1053 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 SAMM50Q9Y512 469 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 SUPT16HQ9Y5B9 1047 aaKnown RBP6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 MYO5BQ9ULV0 1848 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 NPHP3Q7Z494 1330 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 PIK3R4Q99570 1358 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 RIMS2Q9UQ26 1411 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 CCDC18Q5T9S5 1454 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 ANKRD62A6NC57 917 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 U2SURPO15042 1029 aaKnown RBP6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 KIF4AO95239 1232 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 MAP3K6O95382 1288 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 YBX3P16989 372 aaKnown RBP eCLIP6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 RPS26P11Q5JNZ5 115 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 CRIPAKQ8N1N5 446 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 NT5C1AQ9BXI3 368 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 TMX1Q9H3N1 280 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 GPAMQ9HCL2 828 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 AKAP2Q9Y2D5 859 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 NEXMIFQ5QGS0 1516 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 ZNF644Q9H582 1327 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 ROBO2Q9HCK4 1378 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 SASH3O75995 380 aa6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 LMNB1P20700 586 aa6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 RPS26P62854 115 aaKnown RBP6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 CCNJLQ8IV13 435 aa6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 GLIS3Q8NEA6 775 aa6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 GAS2L1Q99501 681 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 GSX2Q9BZM3 304 aa6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 ZCCHC2Q9C0B9 1178 aaKnown RBP6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 RBSNQ9H1K0 784 aa6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 KCNQ5Q9NR82 932 aa6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 TLR7Q9NYK1 1049 aaKnown RBP6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 SIRPGQ9P1W8 387 aa6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 GMPR2Q9P2T1 348 aaKnown RBP6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 R3HCC1Q9Y3T6 440 aaKnown RBP6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 ADCY9O60503 1353 aa6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 MTUS2Q5JR59 1369 aa6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 DHX57Q6P158 1386 aaKnown RBP6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 CROCC2H7BZ55 1655 aa6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 CUL9Q8IWT3 2517 aa6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 EFSO43281 561 aa6.67□□□□□ -1.34
HMGB1P23-201ENST00000518743 EIF4EBP3O60516 100 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P23-201ENST00000518743 MMP20O60882 483 aa6.67□□□□□ -1.34
HMGB1P23-201ENST00000518743 GRNP28799 593 aaKnown RBP6.67□□□□□ -1.34
HMGB1P23-201ENST00000518743 SMCPP49901 116 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P23-201ENST00000518743 PEAR1Q5VY43 1037 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P23-201ENST00000518743 CCDC84Q86UT8 332 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P23-201ENST00000518743 NLGN2Q8NFZ4 835 aa6.67□□□□□ -1.34
HMGB1P23-201ENST00000518743 CPLX3Q8WVH0 158 aa6.67□□□□□ -1.34
HMGB1P23-201ENST00000518743 ABCB6Q9NP58 842 aa6.67□□□□□ -1.34
HMGB1P23-201ENST00000518743 COPRSQ9NQ92 184 aa6.67□□□□□ -1.34
HMGB1P23-201ENST00000518743 PHF24Q9UPV7 400 aa6.67□□□□□ -1.34
HMGB1P23-201ENST00000518743 ADGRL2O95490 1459 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 THSD7AQ9UPZ6 1657 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 DLL1O00548 723 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 KHNYNO15037 678 aaKnown RBP6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 ITPKAP23677 461 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 POLD1P28340 1107 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 SOX9P48436 509 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 LMNB2Q03252 620 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 TNNI3KQ59H18 835 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 SDE2Q6IQ49 451 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 LRP10Q7Z4F1 713 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 ZNF296Q8WUU4 475 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 TRERF1Q96PN7 1200 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 OSMRQ99650 979 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 TRIM55Q9BYV6 548 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 BTG4Q9NY30 223 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 MARK1Q9P0L2 795 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 KANSL3Q9P2N6 904 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 ADAMTS13Q76LX8 1427 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 PTPRUQ92729 1446 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 CCDC141Q6ZP82 1450 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 PXDNQ92626 1479 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 FIGNL2A6NMB9 653 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms