RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 AAMPQ13685 434 aa9.21□□□□□ -0.94
PVT1-206ENST00000517838 VGLL4Q14135 290 aa9.21□□□□□ -0.94
PVT1-206ENST00000517838 TAF1CQ15572 869 aaPredicted RBP9.21□□□□□ -0.94
PVT1-206ENST00000517838 ITPRIPQ8IWB1 547 aa9.21□□□□□ -0.94
PVT1-206ENST00000517838 PRO3102Q9H379 93 aa9.21□□□□□ -0.94
PVT1-206ENST00000517838 ZNF70Q9UC06 446 aaPredicted RBP9.21□□□□□ -0.94
PVT1-206ENST00000517838 TRIOBPQ9H2D6 2365 aa9.2□□□□□ -0.94
PVT1-206ENST00000517838 PSME4Q14997 1843 aa9.2□□□□□ -0.94
PVT1-206ENST00000517838 TLR2O60603 784 aa9.2□□□□□ -0.94
PVT1-206ENST00000517838 GTF2A2P52657 109 aa9.2□□□□□ -0.94
PVT1-206ENST00000517838 LACTBP83111 547 aaPredicted RBP9.2□□□□□ -0.94
PVT1-206ENST00000517838 NEXNQ0ZGT2 675 aa9.2□□□□□ -0.94
PVT1-206ENST00000517838 GCKRQ14397 625 aa9.2□□□□□ -0.94
PVT1-206ENST00000517838 MVPQ14764 893 aaKnown RBP9.2□□□□□ -0.94
PVT1-206ENST00000517838 MTFR1Q15390 333 aa9.2□□□□□ -0.94
PVT1-206ENST00000517838 G2E3Q7L622 706 aa9.2□□□□□ -0.94
PVT1-206ENST00000517838 UBE2Q1Q7Z7E8 422 aa9.2□□□□□ -0.94
PVT1-206ENST00000517838 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.2□□□□□ -0.94
PVT1-206ENST00000517838 SSH1Q8WYL5 1049 aa9.2□□□□□ -0.94
PVT1-206ENST00000517838 DPF3Q92784 378 aa9.2□□□□□ -0.94
PVT1-206ENST00000517838 SHISA4Q96DD7 197 aa9.2□□□□□ -0.94
PVT1-206ENST00000517838 TMEM39BQ9GZU3 492 aa9.2□□□□□ -0.94
PVT1-206ENST00000517838 TDRD3Q9H7E2 651 aaKnown RBP9.2□□□□□ -0.94
PVT1-206ENST00000517838 BTBD19C9JJ37 291 aa9.19□□□□□ -0.94
PVT1-206ENST00000517838 ARHGAP33O14559 1287 aa9.19□□□□□ -0.94
PVT1-206ENST00000517838 CTGFP29279 349 aa9.19□□□□□ -0.94
PVT1-206ENST00000517838 LSM11P83369 360 aaKnown RBP eCLIP9.19□□□□□ -0.94
PVT1-206ENST00000517838 ALDH1L2Q3SY69 923 aa9.19□□□□□ -0.94
PVT1-206ENST00000517838 ZNF804AQ7Z570 1209 aa9.19□□□□□ -0.94
PVT1-206ENST00000517838 SLC17A8Q8NDX2 589 aa9.19□□□□□ -0.94
PVT1-206ENST00000517838 ZDHHC16Q969W1 377 aa9.19□□□□□ -0.94
PVT1-206ENST00000517838 CHMP4AQ9BY43 222 aa9.19□□□□□ -0.94
PVT1-206ENST00000517838 SERPINA10Q9UK55 444 aa9.19□□□□□ -0.94
PVT1-206ENST00000517838 NOB1Q9ULX3 412 aaKnown RBP9.19□□□□□ -0.94
PVT1-206ENST00000517838 TNNQ9UQP3 1299 aa9.19□□□□□ -0.94
PVT1-206ENST00000517838 LAMA3Q16787 3333 aa9.19□□□□□ -0.94
PVT1-206ENST00000517838 ZNF646O15015 1829 aaPredicted RBP9.19□□□□□ -0.94
PVT1-206ENST00000517838 CEP290O15078 2479 aa9.19□□□□□ -0.94
PVT1-206ENST00000517838 ANKRD18BA2A2Z9 1011 aa9.18□□□□□ -0.94
PVT1-206ENST00000517838 TCP10L2B9ZVM9 353 aa9.18□□□□□ -0.94
PVT1-206ENST00000517838 RLBP1P12271 317 aa9.18□□□□□ -0.94
PVT1-206ENST00000517838 FOXO4P98177 505 aa9.18□□□□□ -0.94
PVT1-206ENST00000517838 TNFAIP1Q13829 316 aa9.18□□□□□ -0.94
PVT1-206ENST00000517838 C17orf99Q6UX52 265 aa9.18□□□□□ -0.94
PVT1-206ENST00000517838 ATF7IPQ6VMQ6 1270 aa9.18□□□□□ -0.94
PVT1-206ENST00000517838 FAM205AQ6ZU69 1335 aa9.18□□□□□ -0.94
PVT1-206ENST00000517838 SKAP1Q86WV1 359 aa9.18□□□□□ -0.94
PVT1-206ENST00000517838 ADAM33Q9BZ11 813 aa9.18□□□□□ -0.94
PVT1-206ENST00000517838 RWDD1Q9H446 243 aaPredicted RBP9.18□□□□□ -0.94
PVT1-206ENST00000517838 DDX19BQ9UMR2 479 aa9.18□□□□□ -0.94
PVT1-206ENST00000517838 SPDYE5A6NIY4 337 aa9.17□□□□□ -0.94
PVT1-206ENST00000517838 IRF6O14896 467 aa9.17□□□□□ -0.94
PVT1-206ENST00000517838 GNRH1P01148 92 aa9.17□□□□□ -0.94
PVT1-206ENST00000517838 CETPP11597 493 aa9.17□□□□□ -0.94
PVT1-206ENST00000517838 PRMT2P55345 433 aa9.17□□□□□ -0.94
PVT1-206ENST00000517838 KIF22Q14807 665 aa9.17□□□□□ -0.94
PVT1-206ENST00000517838 GRIK5Q16478 980 aa9.17□□□□□ -0.94
PVT1-206ENST00000517838 TWISTNBQ3B726 338 aaPredicted RBP9.17□□□□□ -0.94
PVT1-206ENST00000517838 SPNS2Q8IVW8 549 aa9.17□□□□□ -0.94
PVT1-206ENST00000517838 DDX12PQ92771 950 aa9.17□□□□□ -0.94
PVT1-206ENST00000517838 TRIM47Q96LD4 638 aa9.17□□□□□ -0.94
PVT1-206ENST00000517838 CHMP4BQ9H444 224 aaKnown RBP9.17□□□□□ -0.94
PVT1-206ENST00000517838 TTF2Q9UNY4 1162 aaKnown RBP9.17□□□□□ -0.94
PVT1-206ENST00000517838 CSADQ9Y600 493 aa9.17□□□□□ -0.94
PVT1-206ENST00000517838 SNCAIPQ9Y6H5 919 aa9.17□□□□□ -0.94
PVT1-206ENST00000517838 COL6A3P12111 3177 aa9.17□□□□□ -0.94
PVT1-206ENST00000517838 WDHD1O75717 1129 aaPredicted RBP9.16□□□□□ -0.94
PVT1-206ENST00000517838 GJB1P08034 283 aa9.16□□□□□ -0.94
PVT1-206ENST00000517838 TRIM27P14373 513 aa9.16□□□□□ -0.94
PVT1-206ENST00000517838 PSMC4P43686 418 aa9.16□□□□□ -0.94
PVT1-206ENST00000517838 GJA8P48165 433 aa9.16□□□□□ -0.94
PVT1-206ENST00000517838 PSEN2P49810 448 aa9.16□□□□□ -0.94
PVT1-206ENST00000517838 IFIT5Q13325 482 aaKnown RBP9.16□□□□□ -0.94
PVT1-206ENST00000517838 SNAPC2Q13487 334 aa9.16□□□□□ -0.94
PVT1-206ENST00000517838 MFSD14BQ5SR56 506 aa9.16□□□□□ -0.94
PVT1-206ENST00000517838 TYW1BQ6NUM6 668 aa9.16□□□□□ -0.94
PVT1-206ENST00000517838 ERO1BQ86YB8 467 aa9.16□□□□□ -0.94
PVT1-206ENST00000517838 LINS1Q8NG48 757 aa9.16□□□□□ -0.94
PVT1-206ENST00000517838 TDRD7Q8NHU6 1098 aaKnown RBP9.16□□□□□ -0.94
PVT1-206ENST00000517838 ZKSCAN4Q969J2 545 aaPredicted RBP9.16□□□□□ -0.94
PVT1-206ENST00000517838 EPAS1Q99814 870 aa9.16□□□□□ -0.94
PVT1-206ENST00000517838 STK31Q9BXU1 1019 aa9.16□□□□□ -0.94
PVT1-206ENST00000517838 ZCCHC17Q9NP64 241 aaKnown RBP9.16□□□□□ -0.94
PVT1-206ENST00000517838 SRRDQ9UH36 339 aa9.16□□□□□ -0.94
PVT1-206ENST00000517838 RBBP6Q7Z6E9 1792 aaKnown RBP9.16□□□□□ -0.94
PVT1-206ENST00000517838 SOX1O00570 391 aaPredicted RBP9.15□□□□□ -0.94
PVT1-206ENST00000517838 ZBTB7BO15156 539 aaPredicted RBP9.15□□□□□ -0.94
PVT1-206ENST00000517838 CCL5P13501 91 aa9.15□□□□□ -0.94
PVT1-206ENST00000517838 OSBPP22059 807 aa9.15□□□□□ -0.94
PVT1-206ENST00000517838 CRKP46108 304 aa9.15□□□□□ -0.94
PVT1-206ENST00000517838 GYG1P46976 350 aa9.15□□□□□ -0.94
PVT1-206ENST00000517838 CACNB3P54284 484 aa9.15□□□□□ -0.94
PVT1-206ENST00000517838 FLIIQ13045 1269 aa9.15□□□□□ -0.94
PVT1-206ENST00000517838 TMEM57Q8N5G2 664 aa9.15□□□□□ -0.94
PVT1-206ENST00000517838 NKX2-3Q8TAU0 364 aa9.15□□□□□ -0.94
PVT1-206ENST00000517838 DNAAF4Q8WXU2 420 aa9.15□□□□□ -0.94
PVT1-206ENST00000517838 LRCH3Q96II8 777 aa9.15□□□□□ -0.94
PVT1-206ENST00000517838 ZNF594Q96JF6 807 aaPredicted RBP9.15□□□□□ -0.94
PVT1-206ENST00000517838 FAM84BQ96KN1 310 aaPredicted RBP9.15□□□□□ -0.94
PVT1-206ENST00000517838 KCNK17Q96T54 332 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms