RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 LRRC4CQ9HCJ2 640 aa6.17□□□□□ -1.42
PDLIM5-218ENST00000513341 RAPGEFL1Q9UHV5 662 aa6.17□□□□□ -1.42
PDLIM5-218ENST00000513341 MED1Q15648 1581 aaPredicted RBP6.17□□□□□ -1.42
PDLIM5-218ENST00000513341 SAMD9Q5K651 1589 aa6.17□□□□□ -1.42
PDLIM5-218ENST00000513341 ZNF335Q9H4Z2 1342 aaPredicted RBP6.17□□□□□ -1.42
PDLIM5-218ENST00000513341 ZNF518AQ6AHZ1 1483 aa6.16□□□□□ -1.42
PDLIM5-218ENST00000513341 ZBTB39O15060 712 aa6.16□□□□□ -1.42
PDLIM5-218ENST00000513341 ESRRAP11474 423 aaPredicted RBP6.16□□□□□ -1.42
PDLIM5-218ENST00000513341 ELOAQ14241 798 aaKnown RBP6.16□□□□□ -1.42
PDLIM5-218ENST00000513341 HP1BP3Q5SSJ5 553 aaPredicted RBP6.16□□□□□ -1.42
PDLIM5-218ENST00000513341 ZNF574Q6ZN55 896 aaPredicted RBP6.16□□□□□ -1.42
PDLIM5-218ENST00000513341 SIAH1Q8IUQ4 282 aa6.16□□□□□ -1.42
PDLIM5-218ENST00000513341 C1orf127Q8N9H9 656 aa6.16□□□□□ -1.42
PDLIM5-218ENST00000513341 HHIPQ96QV1 700 aa6.16□□□□□ -1.42
PDLIM5-218ENST00000513341 SEMA6CQ9H3T2 930 aa6.16□□□□□ -1.42
PDLIM5-218ENST00000513341 NOVA2Q9UNW9 492 aaKnown RBP6.16□□□□□ -1.42
PDLIM5-218ENST00000513341 CDK11AQ9UQ88 783 aaPredicted RBP6.16□□□□□ -1.42
PDLIM5-218ENST00000513341 ACTL7BQ9Y614 415 aa6.16□□□□□ -1.42
PDLIM5-218ENST00000513341 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.16□□□□□ -1.42
PDLIM5-218ENST00000513341 NCANO14594 1321 aa6.16□□□□□ -1.42
PDLIM5-218ENST00000513341 PLA2R1Q13018 1463 aa6.15□□□□□ -1.42
PDLIM5-218ENST00000513341 CAMSAP1Q5T5Y3 1602 aa6.15□□□□□ -1.42
PDLIM5-218ENST00000513341 PRMT3O60678 531 aa6.15□□□□□ -1.42
PDLIM5-218ENST00000513341 NFICP08651 508 aa6.15□□□□□ -1.42
PDLIM5-218ENST00000513341 AFAP1Q8N556 730 aa6.15□□□□□ -1.42
PDLIM5-218ENST00000513341 NUDT16Q96DE0 195 aaKnown RBP6.15□□□□□ -1.42
PDLIM5-218ENST00000513341 TOX2Q96NM4 488 aa6.15□□□□□ -1.42
PDLIM5-218ENST00000513341 RC3H2Q9HBD1 1191 aaKnown RBP6.15□□□□□ -1.42
PDLIM5-218ENST00000513341 C1GALT1Q9NS00 363 aa6.15□□□□□ -1.42
PDLIM5-218ENST00000513341 FAM53CQ9NYF3 392 aa6.15□□□□□ -1.42
PDLIM5-218ENST00000513341 CXXC1Q9P0U4 656 aaPredicted RBP6.15□□□□□ -1.42
PDLIM5-218ENST00000513341 VAV3Q9UKW4 847 aa6.15□□□□□ -1.42
PDLIM5-218ENST00000513341 MLH3Q9UHC1 1453 aa6.15□□□□□ -1.43
PDLIM5-218ENST00000513341 PRRG2O14669 202 aa6.14□□□□□ -1.43
PDLIM5-218ENST00000513341 RNASE1P07998 156 aaKnown RBP6.14□□□□□ -1.43
PDLIM5-218ENST00000513341 CFAP70Q5T0N1 1121 aa6.14□□□□□ -1.43
PDLIM5-218ENST00000513341 OSMRQ99650 979 aa6.14□□□□□ -1.43
PDLIM5-218ENST00000513341 CHRDQ9H2X0 955 aa6.14□□□□□ -1.43
PDLIM5-218ENST00000513341 ZFYVE1Q9HBF4 777 aa6.14□□□□□ -1.43
PDLIM5-218ENST00000513341 MBNL3Q9NUK0 354 aaKnown RBP6.14□□□□□ -1.43
PDLIM5-218ENST00000513341 SYNGAP1Q96PV0 1343 aa6.14□□□□□ -1.43
PDLIM5-218ENST00000513341 ZMYM3Q14202 1370 aa6.14□□□□□ -1.43
PDLIM5-218ENST00000513341 PTPRKQ15262 1439 aa6.14□□□□□ -1.43
PDLIM5-218ENST00000513341 TRPA1O75762 1119 aa6.13□□□□□ -1.43
PDLIM5-218ENST00000513341 CYP27C1Q4G0S4 372 aa6.13□□□□□ -1.43
PDLIM5-218ENST00000513341 LILRA6Q6PI73 481 aa6.13□□□□□ -1.43
PDLIM5-218ENST00000513341 KRTAP9-3Q9BYQ3 159 aa6.13□□□□□ -1.43
PDLIM5-218ENST00000513341 TCOF1Q13428 1488 aaKnown RBP6.13□□□□□ -1.43
PDLIM5-218ENST00000513341 CPS1P31327 1500 aa6.13□□□□□ -1.43
PDLIM5-218ENST00000513341 KDM5CP41229 1560 aa6.13□□□□□ -1.43
PDLIM5-218ENST00000513341 MROH2AA6NES4 1674 aa6.12□□□□□ -1.43
PDLIM5-218ENST00000513341 TSPAN15O95858 294 aa6.12□□□□□ -1.43
PDLIM5-218ENST00000513341 ZNF865P0CJ78 1059 aaPredicted RBP6.12□□□□□ -1.43
PDLIM5-218ENST00000513341 PRKCQQ04759 706 aa6.12□□□□□ -1.43
PDLIM5-218ENST00000513341 CAPN12Q6ZSI9 719 aa6.12□□□□□ -1.43
PDLIM5-218ENST00000513341 C1QL4Q86Z23 238 aa6.12□□□□□ -1.43
PDLIM5-218ENST00000513341 FLAD1Q8NFF5 587 aa6.12□□□□□ -1.43
PDLIM5-218ENST00000513341 NETO1Q8TDF5 533 aa6.12□□□□□ -1.43
PDLIM5-218ENST00000513341 ZKSCAN3Q9BRR0 538 aa6.12□□□□□ -1.43
PDLIM5-218ENST00000513341 MKNK2Q9HBH9 465 aa6.12□□□□□ -1.43
PDLIM5-218ENST00000513341 DIP2CQ9Y2E4 1556 aa6.11□□□□□ -1.43
PDLIM5-218ENST00000513341 CD8BP10966 210 aa6.11□□□□□ -1.43
PDLIM5-218ENST00000513341 EDN3P14138 238 aa6.11□□□□□ -1.43
PDLIM5-218ENST00000513341 PCSK2P16519 638 aa6.11□□□□□ -1.43
PDLIM5-218ENST00000513341 RFX1P22670 979 aa6.11□□□□□ -1.43
PDLIM5-218ENST00000513341 GSTM4Q03013 218 aa6.11□□□□□ -1.43
PDLIM5-218ENST00000513341 ADAMTS6Q9UKP5 1117 aa6.11□□□□□ -1.43
PDLIM5-218ENST00000513341 MYO5CQ9NQX4 1742 aa6.11□□□□□ -1.43
PDLIM5-218ENST00000513341 CYP11A1P05108 521 aa6.1□□□□□ -1.43
PDLIM5-218ENST00000513341 RAB6AP20340 208 aa6.1□□□□□ -1.43
PDLIM5-218ENST00000513341 CFPP27918 469 aa6.1□□□□□ -1.43
PDLIM5-218ENST00000513341 RAP1GAPP47736 663 aa6.1□□□□□ -1.43
PDLIM5-218ENST00000513341 BNIP3Q12983 259 aa6.1□□□□□ -1.43
PDLIM5-218ENST00000513341 NAA30Q147X3 362 aaPredicted RBP6.1□□□□□ -1.43
PDLIM5-218ENST00000513341 LRRN4CLQ8ND94 238 aa6.1□□□□□ -1.43
PDLIM5-218ENST00000513341 ZSCAN18Q8TBC5 510 aaPredicted RBP6.1□□□□□ -1.43
PDLIM5-218ENST00000513341 PI4K2BQ8TCG2 481 aa6.1□□□□□ -1.43
PDLIM5-218ENST00000513341 PPP1R16BQ96T49 567 aa6.1□□□□□ -1.43
PDLIM5-218ENST00000513341 FAM105AQ9NUU6 356 aa6.1□□□□□ -1.43
PDLIM5-218ENST00000513341 RGS17Q9UGC6 210 aaPredicted RBP6.1□□□□□ -1.43
PDLIM5-218ENST00000513341 SHANK2Q9UPX8 1470 aa6.09□□□□□ -1.43
PDLIM5-218ENST00000513341 SUPT6HQ7KZ85 1726 aaKnown RBP6.09□□□□□ -1.43
PDLIM5-218ENST00000513341 CLUAP1Q96AJ1 413 aa6.09□□□□□ -1.43
PDLIM5-218ENST00000513341 ZMIZ1Q9ULJ6 1067 aa6.09□□□□□ -1.43
PDLIM5-218ENST00000513341 ZNF142P52746 1687 aaPredicted RBP6.08□□□□□ -1.44
PDLIM5-218ENST00000513341 LRRC10BA6NIK2 292 aa6.08□□□□□ -1.44
PDLIM5-218ENST00000513341 B8ZZF3 427 aa6.08□□□□□ -1.44
PDLIM5-218ENST00000513341 ASPAP45381 313 aa6.08□□□□□ -1.44
PDLIM5-218ENST00000513341 LCNL1Q6ZST4 164 aa6.08□□□□□ -1.44
PDLIM5-218ENST00000513341 DYMQ7RTS9 669 aa6.08□□□□□ -1.44
PDLIM5-218ENST00000513341 ANKLE2Q86XL3 938 aa6.08□□□□□ -1.44
PDLIM5-218ENST00000513341 THEMISQ8N1K5 641 aaPredicted RBP6.08□□□□□ -1.44
PDLIM5-218ENST00000513341 MKNK1Q9BUB5 465 aa6.08□□□□□ -1.44
PDLIM5-218ENST00000513341 GGNBP2Q9H3C7 697 aa6.08□□□□□ -1.44
PDLIM5-218ENST00000513341 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.08□□□□□ -1.44
PDLIM5-218ENST00000513341 ABCA6Q8N139 1617 aa6.07□□□□□ -1.44
PDLIM5-218ENST00000513341 CEP170BQ9Y4F5 1589 aaPredicted RBP6.07□□□□□ -1.44
PDLIM5-218ENST00000513341 PDGFAP04085 211 aa6.07□□□□□ -1.44
PDLIM5-218ENST00000513341 MZF1P28698 734 aaPredicted RBP6.07□□□□□ -1.44
PDLIM5-218ENST00000513341 SLC23A3Q6PIS1 610 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms