RNA–Protein interactions for RNA: ENST00000509415.5

CALCOCO2-214, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-214ENST00000509415 PTCH2Q9Y6C5 1203 aa13.15□□□□□ -0.3
CALCOCO2-214ENST00000509415 RFX7Q2KHR2 1363 aa13.15□□□□□ -0.3
CALCOCO2-214ENST00000509415 ATRNL1Q5VV63 1379 aa13.15□□□□□ -0.3
CALCOCO2-214ENST00000509415 MAST2Q6P0Q8 1798 aa13.15□□□□□ -0.31
CALCOCO2-214ENST00000509415 IPO8O15397 1037 aaKnown RBP13.14□□□□□ -0.31
CALCOCO2-214ENST00000509415 ENTPD3O75355 529 aa13.14□□□□□ -0.31
CALCOCO2-214ENST00000509415 GNRH1P01148 92 aa13.14□□□□□ -0.31
CALCOCO2-214ENST00000509415 RGS3P49796 1198 aa13.14□□□□□ -0.31
CALCOCO2-214ENST00000509415 TFCP2Q12800 502 aa13.14□□□□□ -0.31
CALCOCO2-214ENST00000509415 MVPQ14764 893 aaKnown RBP13.14□□□□□ -0.31
CALCOCO2-214ENST00000509415 SPTY2D1Q68D10 685 aaPredicted RBP13.14□□□□□ -0.31
CALCOCO2-214ENST00000509415 ZFPM1Q8IX07 1006 aa13.14□□□□□ -0.31
CALCOCO2-214ENST00000509415 FAM163AQ96GL9 167 aaPredicted RBP13.14□□□□□ -0.31
CALCOCO2-214ENST00000509415 XAGE2Q96GT9 111 aa13.14□□□□□ -0.31
CALCOCO2-214ENST00000509415 TMEM106CQ9BVX2 250 aa13.14□□□□□ -0.31
CALCOCO2-214ENST00000509415 ARHGAP39Q9C0H5 1083 aa13.14□□□□□ -0.31
CALCOCO2-214ENST00000509415 ABCF2Q9UG63 623 aa13.14□□□□□ -0.31
CALCOCO2-214ENST00000509415 PDHXO00330 501 aa13.13□□□□□ -0.31
CALCOCO2-214ENST00000509415 TRIM27P14373 513 aa13.13□□□□□ -0.31
CALCOCO2-214ENST00000509415 EN2P19622 333 aaPredicted RBP13.13□□□□□ -0.31
CALCOCO2-214ENST00000509415 MOGSQ13724 837 aa13.13□□□□□ -0.31
CALCOCO2-214ENST00000509415 C17orf99Q6UX52 265 aa13.13□□□□□ -0.31
CALCOCO2-214ENST00000509415 ATF7IPQ6VMQ6 1270 aa13.13□□□□□ -0.31
CALCOCO2-214ENST00000509415 MROH7-TTC4A0A0A0MT08 1334 aa13.13□□□□□ -0.31
CALCOCO2-214ENST00000509415 ADGRA2Q96PE1 1338 aa13.13□□□□□ -0.31
CALCOCO2-214ENST00000509415 PHF20L1A8MW92 1017 aa13.12□□□□□ -0.31
CALCOCO2-214ENST00000509415 CXCL11O14625 94 aa13.12□□□□□ -0.31
CALCOCO2-214ENST00000509415 GNAI2P04899 355 aa13.12□□□□□ -0.31
CALCOCO2-214ENST00000509415 PRKCSHP14314 528 aaPredicted RBP13.12□□□□□ -0.31
CALCOCO2-214ENST00000509415 BTDP43251 543 aa13.12□□□□□ -0.31
CALCOCO2-214ENST00000509415 PRMT2P55345 433 aa13.12□□□□□ -0.31
CALCOCO2-214ENST00000509415 SCYL3Q8IZE3 742 aa13.12□□□□□ -0.31
CALCOCO2-214ENST00000509415 NEUROD6Q96NK8 337 aa13.12□□□□□ -0.31
CALCOCO2-214ENST00000509415 CPA4Q9UI42 421 aa13.12□□□□□ -0.31
CALCOCO2-214ENST00000509415 LOC285556D6RIA3 1793 aa13.12□□□□□ -0.31
CALCOCO2-214ENST00000509415 BCAR3O75815 825 aa13.11□□□□□ -0.31
CALCOCO2-214ENST00000509415 MAP3K10Q02779 954 aa13.11□□□□□ -0.31
CALCOCO2-214ENST00000509415 SH3BP5LQ7L8J4 393 aa13.11□□□□□ -0.31
CALCOCO2-214ENST00000509415 ZSCAN29Q8IWY8 852 aaPredicted RBP13.11□□□□□ -0.31
CALCOCO2-214ENST00000509415 FRAT1Q92837 279 aaPredicted RBP13.11□□□□□ -0.31
CALCOCO2-214ENST00000509415 DDX4Q9NQI0 724 aaKnown RBP13.11□□□□□ -0.31
CALCOCO2-214ENST00000509415 TNNQ9UQP3 1299 aa13.11□□□□□ -0.31
CALCOCO2-214ENST00000509415 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.11□□□□□ -0.31
CALCOCO2-214ENST00000509415 SIPA1L1O43166 1804 aa13.11□□□□□ -0.31
CALCOCO2-214ENST00000509415 MYH1P12882 1939 aa13.1□□□□□ -0.31
CALCOCO2-214ENST00000509415 GPR75-ASB3A0A0A6YYF3 556 aa13.1□□□□□ -0.31
CALCOCO2-214ENST00000509415 DDTLA6NHG4 134 aaPredicted RBP13.1□□□□□ -0.31
CALCOCO2-214ENST00000509415 PTPRAP18433 802 aa13.1□□□□□ -0.31
CALCOCO2-214ENST00000509415 PSMC4P43686 418 aa13.1□□□□□ -0.31
CALCOCO2-214ENST00000509415 MECOMQ03112 1051 aa13.1□□□□□ -0.31
CALCOCO2-214ENST00000509415 PICALMQ13492 652 aa13.1□□□□□ -0.31
CALCOCO2-214ENST00000509415 SLC4A8Q2Y0W8 1093 aa13.1□□□□□ -0.31
CALCOCO2-214ENST00000509415 GORABQ5T7V8 394 aa13.1□□□□□ -0.31
CALCOCO2-214ENST00000509415 GPAT2Q6NUI2 795 aa13.1□□□□□ -0.31
CALCOCO2-214ENST00000509415 SPATA5Q8NB90 893 aa13.1□□□□□ -0.31
CALCOCO2-214ENST00000509415 SH3TC2Q8TF17 1288 aa13.1□□□□□ -0.31
CALCOCO2-214ENST00000509415 ZNF384Q8TF68 577 aa13.1□□□□□ -0.31
CALCOCO2-214ENST00000509415 GCC1Q96CN9 775 aa13.1□□□□□ -0.31
CALCOCO2-214ENST00000509415 PARK7Q99497 189 aaKnown RBP13.1□□□□□ -0.31
CALCOCO2-214ENST00000509415 PICK1Q9NRD5 415 aa13.1□□□□□ -0.31
CALCOCO2-214ENST00000509415 PPP4R2Q9NY27 417 aa13.1□□□□□ -0.31
CALCOCO2-214ENST00000509415 HMG20BQ9P0W2 317 aa13.1□□□□□ -0.31
CALCOCO2-214ENST00000509415 ZHX2Q9Y6X8 837 aa13.1□□□□□ -0.31
CALCOCO2-214ENST00000509415 A0A0G2JLL6 359 aaPredicted RBP13.09□□□□□ -0.31
CALCOCO2-214ENST00000509415 PNMA6EA0A0J9YXQ4 647 aa13.09□□□□□ -0.31
CALCOCO2-214ENST00000509415 MAP4K4O95819 1239 aaPredicted RBP13.09□□□□□ -0.31
CALCOCO2-214ENST00000509415 LDHCP07864 332 aa13.09□□□□□ -0.31
CALCOCO2-214ENST00000509415 HOXD10P28358 340 aa13.09□□□□□ -0.31
CALCOCO2-214ENST00000509415 CTGFP29279 349 aa13.09□□□□□ -0.31
CALCOCO2-214ENST00000509415 ARID4AP29374 1257 aaPredicted RBP13.09□□□□□ -0.31
CALCOCO2-214ENST00000509415 RHBDL3P58872 404 aa13.09□□□□□ -0.31
CALCOCO2-214ENST00000509415 GSTO1P78417 241 aa13.09□□□□□ -0.31
CALCOCO2-214ENST00000509415 G3BP1Q13283 466 aaKnown RBP eCLIP13.09□□□□□ -0.317e-6■□□□□ 8.9
CALCOCO2-214ENST00000509415 FASTKD5Q7L8L6 764 aaKnown RBP13.09□□□□□ -0.31
CALCOCO2-214ENST00000509415 PRRT2Q7Z6L0 340 aaPredicted RBP13.09□□□□□ -0.31
CALCOCO2-214ENST00000509415 CLUAP1Q96AJ1 413 aa13.09□□□□□ -0.31
CALCOCO2-214ENST00000509415 NSUN4Q96CB9 384 aaKnown RBP13.09□□□□□ -0.31
CALCOCO2-214ENST00000509415 TRIM47Q96LD4 638 aa13.09□□□□□ -0.31
CALCOCO2-214ENST00000509415 SRRDQ9UH36 339 aa13.09□□□□□ -0.31
CALCOCO2-214ENST00000509415 AFG3L2Q9Y4W6 797 aa13.09□□□□□ -0.31
CALCOCO2-214ENST00000509415 COL2A1P02458 1487 aaPredicted RBP13.09□□□□□ -0.31
CALCOCO2-214ENST00000509415 TBC1D12O60347 775 aa13.08□□□□□ -0.32
CALCOCO2-214ENST00000509415 CTNND1O60716 968 aaKnown RBP13.08□□□□□ -0.32
CALCOCO2-214ENST00000509415 ECM2O94769 699 aaPredicted RBP13.08□□□□□ -0.32
CALCOCO2-214ENST00000509415 FMNL1O95466 1100 aaPredicted RBP13.08□□□□□ -0.32
CALCOCO2-214ENST00000509415 BCRP11274 1271 aa13.08□□□□□ -0.32
CALCOCO2-214ENST00000509415 OSBPP22059 807 aa13.08□□□□□ -0.32
CALCOCO2-214ENST00000509415 PI16Q6UXB8 463 aa13.08□□□□□ -0.32
CALCOCO2-214ENST00000509415 PCDH10Q9P2E7 1040 aa13.08□□□□□ -0.32
CALCOCO2-214ENST00000509415 RANBP2P49792 3224 aaKnown RBP13.08□□□□□ -0.32
CALCOCO2-214ENST00000509415 MYCP01106 439 aaPredicted RBP13.07□□□□□ -0.32
CALCOCO2-214ENST00000509415 UQCRFS1P1P0C7P4 283 aa13.07□□□□□ -0.32
CALCOCO2-214ENST00000509415 SLURP2P0DP57 97 aa13.07□□□□□ -0.32
CALCOCO2-214ENST00000509415 CYP2C8P10632 490 aa13.07□□□□□ -0.32
CALCOCO2-214ENST00000509415 MCAMP43121 646 aa13.07□□□□□ -0.32
CALCOCO2-214ENST00000509415 ZKSCAN2Q63HK3 967 aa13.07□□□□□ -0.32
CALCOCO2-214ENST00000509415 GADL1Q6ZQY3 521 aa13.07□□□□□ -0.32
CALCOCO2-214ENST00000509415 TBC1D9Q6ZT07 1266 aa13.07□□□□□ -0.32
CALCOCO2-214ENST00000509415 TMEM57Q8N5G2 664 aa13.07□□□□□ -0.32
CALCOCO2-214ENST00000509415 RAET1EQ8TD07 263 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms