RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 SPATA31A5Q5VU36 1347 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 SPATA31A7Q8IWB4 1347 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 A0A1W2PQ27 194 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 A0A1W2PQ64 194 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 A0A1W2PQD8 194 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 TULP1O00294 542 aaPredicted RBP8.41□□□□□ -1.06
NPHP3-208ENST00000490993 ZSCAN12O43309 604 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 LIFRP42702 1097 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 CASP7P55210 303 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 VPS72Q15906 364 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 CCDC70Q6NSX1 233 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 ZSCAN10Q96SZ4 725 aaPredicted RBP8.41□□□□□ -1.06
NPHP3-208ENST00000490993 JCADQ9P266 1359 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 UQCRHLA0A096LP55 91 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 BIN1O00499 593 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 SH2B2O14492 632 aaPredicted RBP8.41□□□□□ -1.06
NPHP3-208ENST00000490993 DDAH1O94760 285 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 UQCRHP07919 91 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 RASGRF1Q13972 1273 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 RC3H1Q5TC82 1133 aaKnown RBP8.41□□□□□ -1.06
NPHP3-208ENST00000490993 ZNF654Q8IZM8 581 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 PRIMPOLQ96LW4 560 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 BCL11BQ9C0K0 894 aaPredicted RBP8.41□□□□□ -1.06
NPHP3-208ENST00000490993 C6orf50Q9HD87 102 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 ZNHIT6Q9NWK9 470 aaKnown RBP8.41□□□□□ -1.06
NPHP3-208ENST00000490993 AATFQ9NY61 560 aaKnown RBP eCLIP8.41□□□□□ -1.06
NPHP3-208ENST00000490993 TRAF1Q13077 416 aa8.41□□□□□ -1.06
NPHP3-208ENST00000490993 DIS3L2Q8IYB7 885 aaKnown RBP8.41□□□□□ -1.06
NPHP3-208ENST00000490993 RRP36Q96EU6 259 aaKnown RBP8.41□□□□□ -1.06
NPHP3-208ENST00000490993 STRBPQ96SI9 672 aaKnown RBP8.41□□□□□ -1.06
NPHP3-208ENST00000490993 FAM208AQ9UK61 1670 aaKnown RBP8.41□□□□□ -1.06
NPHP3-208ENST00000490993 XDHP47989 1333 aa8.4□□□□□ -1.06
NPHP3-208ENST00000490993 MYO1BO43795 1136 aa8.4□□□□□ -1.06
NPHP3-208ENST00000490993 RESTQ13127 1097 aa8.4□□□□□ -1.06
NPHP3-208ENST00000490993 CCDC96Q2M329 555 aa8.4□□□□□ -1.06
NPHP3-208ENST00000490993 ZNF622Q969S3 477 aaKnown RBP eCLIP8.4□□□□□ -1.06
NPHP3-208ENST00000490993 GNA11P29992 359 aa8.4□□□□□ -1.06
NPHP3-208ENST00000490993 RCAN1P53805 252 aa8.4□□□□□ -1.06
NPHP3-208ENST00000490993 TEX11Q8IYF3 940 aa8.4□□□□□ -1.06
NPHP3-208ENST00000490993 TXLNBQ8N3L3 684 aa8.4□□□□□ -1.06
NPHP3-208ENST00000490993 AOPEPQ8N6M6 819 aa8.4□□□□□ -1.06
NPHP3-208ENST00000490993 FANCBQ8NB91 859 aa8.4□□□□□ -1.06
NPHP3-208ENST00000490993 CALML4Q96GE6 196 aa8.4□□□□□ -1.06
NPHP3-208ENST00000490993 RCOR1Q9UKL0 485 aa8.4□□□□□ -1.06
NPHP3-208ENST00000490993 A0A1B0GVL5 298 aa8.4□□□□□ -1.06
NPHP3-208ENST00000490993 TUBB4AP04350 444 aa8.4□□□□□ -1.06
NPHP3-208ENST00000490993 KRT18P05783 430 aaKnown RBP8.4□□□□□ -1.06
NPHP3-208ENST00000490993 UBA7P41226 1012 aa8.4□□□□□ -1.06
NPHP3-208ENST00000490993 PTPN14Q15678 1187 aa8.4□□□□□ -1.06
NPHP3-208ENST00000490993 APOA5Q6Q788 366 aa8.4□□□□□ -1.06
NPHP3-208ENST00000490993 CTAGE1Q96RT6 745 aa8.4□□□□□ -1.06
NPHP3-208ENST00000490993 POLR3EQ9NVU0 708 aa8.4□□□□□ -1.06
NPHP3-208ENST00000490993 FGFR1OPO95684 399 aaKnown RBP8.4□□□□□ -1.07
NPHP3-208ENST00000490993 ADRA2BP18089 450 aa8.4□□□□□ -1.07
NPHP3-208ENST00000490993 PI16Q6UXB8 463 aa8.4□□□□□ -1.07
NPHP3-208ENST00000490993 FAM196AQ6ZSG2 479 aa8.4□□□□□ -1.07
NPHP3-208ENST00000490993 USP28Q96RU2 1077 aa8.4□□□□□ -1.07
NPHP3-208ENST00000490993 LRRC37A3O60309 1634 aa8.4□□□□□ -1.07
NPHP3-208ENST00000490993 MED1Q15648 1581 aaPredicted RBP8.39□□□□□ -1.07
NPHP3-208ENST00000490993 ALDH1B1P30837 517 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 EXOSC10Q01780 885 aaKnown RBP8.39□□□□□ -1.07
NPHP3-208ENST00000490993 NOLC1Q14978 699 aaKnown RBP eCLIP8.39□□□□□ -1.07
NPHP3-208ENST00000490993 SMARCC2Q8TAQ2 1214 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 PHKBQ93100 1093 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 RGL2O15211 777 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 CAMTA2O94983 1202 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 FMNL1O95466 1100 aaPredicted RBP8.39□□□□□ -1.07
NPHP3-208ENST00000490993 CMA1P23946 247 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 LUZP1Q86V48 1076 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 CCDC43Q96MW1 224 aaKnown RBP8.39□□□□□ -1.07
NPHP3-208ENST00000490993 CBX8Q9HC52 389 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 CABP5Q9NP86 173 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 SPATA31A6Q5VVP1 1343 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 GOLGA6L9A6NEM1 432 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 OFD1O75665 1012 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 ZNF202O95125 648 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 EPS15P42566 896 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 OTUD7BQ6GQQ9 843 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 TMC6Q7Z403 805 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 HEATR3Q7Z4Q2 680 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 NOSTRINQ8IVI9 506 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 MB21D2Q8IYB1 491 aaPredicted RBP8.39□□□□□ -1.07
NPHP3-208ENST00000490993 STAG1Q8WVM7 1258 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 FERMT2Q96AC1 680 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 BRIP1Q9BX63 1249 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 IL25Q9H293 177 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 KCNH3Q9ULD8 1083 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 BCL9O00512 1426 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 KIF20AO95235 890 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 PARP1P09874 1014 aaKnown RBP8.39□□□□□ -1.07
NPHP3-208ENST00000490993 LIG1P18858 919 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 NLRP12P59046 1061 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 SPAG1Q07617 926 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 CCDC186Q7Z3E2 898 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 V9GY48 417 aaPredicted RBP8.39□□□□□ -1.07
NPHP3-208ENST00000490993 TNS2Q63HR2 1409 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 TNKSO95271 1327 aa8.39□□□□□ -1.07
NPHP3-208ENST00000490993 KDM4FA0A1W2PPD8 638 aa8.38□□□□□ -1.07
NPHP3-208ENST00000490993 USP17L12C9JPN9 530 aa8.38□□□□□ -1.07
NPHP3-208ENST00000490993 USP17L21D6R901 530 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms