RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 ACTR10Q9NZ32 417 aa7□□□□□ -1.29
SRRM1-215ENST00000488317 SNCAIPQ9Y6H5 919 aa7□□□□□ -1.29
SRRM1-215ENST00000488317 SHISA8B8ZZ34 492 aa6.99□□□□□ -1.29
SRRM1-215ENST00000488317 DDX3YO15523 660 aaKnown RBP6.99□□□□□ -1.29
SRRM1-215ENST00000488317 ZNF862O60290 1169 aa6.99□□□□□ -1.29
SRRM1-215ENST00000488317 SLFN14P0C7P3 912 aa6.99□□□□□ -1.29
SRRM1-215ENST00000488317 SERINC3Q13530 473 aa6.99□□□□□ -1.29
SRRM1-215ENST00000488317 SETDB1Q15047 1291 aa6.99□□□□□ -1.29
SRRM1-215ENST00000488317 LRFN4Q6PJG9 635 aa6.99□□□□□ -1.29
SRRM1-215ENST00000488317 FAM169BQ8N8A8 192 aa6.99□□□□□ -1.29
SRRM1-215ENST00000488317 GALNT11Q8NCW6 608 aa6.99□□□□□ -1.29
SRRM1-215ENST00000488317 MKL1Q969V6 931 aa6.99□□□□□ -1.29
SRRM1-215ENST00000488317 RRAGCQ9HB90 399 aa6.99□□□□□ -1.29
SRRM1-215ENST00000488317 PRDM6Q9NQX0 595 aa6.99□□□□□ -1.29
SRRM1-215ENST00000488317 ST7Q9NRC1 585 aa6.99□□□□□ -1.29
SRRM1-215ENST00000488317 PICK1Q9NRD5 415 aa6.99□□□□□ -1.29
SRRM1-215ENST00000488317 DCDC2CA8MYV0 355 aa6.98□□□□□ -1.29
SRRM1-215ENST00000488317 CTSBP07858 339 aa6.98□□□□□ -1.29
SRRM1-215ENST00000488317 CD68P34810 354 aaPredicted RBP6.98□□□□□ -1.29
SRRM1-215ENST00000488317 LRRFIP1Q32MZ4 808 aaKnown RBP6.98□□□□□ -1.29
SRRM1-215ENST00000488317 LARP1BQ659C4 914 aaKnown RBP6.98□□□□□ -1.29
SRRM1-215ENST00000488317 ZNF746Q6NUN9 644 aaPredicted RBP6.98□□□□□ -1.29
SRRM1-215ENST00000488317 LSRQ86X29 649 aaPredicted RBP6.98□□□□□ -1.29
SRRM1-215ENST00000488317 WDR89Q96FK6 387 aaPredicted RBP6.98□□□□□ -1.29
SRRM1-215ENST00000488317 NRSN2Q9GZP1 204 aa6.98□□□□□ -1.29
SRRM1-215ENST00000488317 CACNA2D2Q9NY47 1150 aa6.98□□□□□ -1.29
SRRM1-215ENST00000488317 CORINQ9Y5Q5 1042 aa6.98□□□□□ -1.29
SRRM1-215ENST00000488317 CSADQ9Y600 493 aa6.98□□□□□ -1.29
SRRM1-215ENST00000488317 LOC100289279A0A1B0GTE1 492 aa6.97□□□□□ -1.29
SRRM1-215ENST00000488317 PRAMEF27A3QJZ7 478 aa6.97□□□□□ -1.29
SRRM1-215ENST00000488317 GFRA2O00451 464 aa6.97□□□□□ -1.29
SRRM1-215ENST00000488317 ATE1O95260 518 aa6.97□□□□□ -1.29
SRRM1-215ENST00000488317 HTR3BO95264 441 aa6.97□□□□□ -1.29
SRRM1-215ENST00000488317 CELA2BP08218 269 aaPredicted RBP6.97□□□□□ -1.29
SRRM1-215ENST00000488317 SLURP2P0DP57 97 aa6.97□□□□□ -1.29
SRRM1-215ENST00000488317 NID1P14543 1247 aa6.97□□□□□ -1.29
SRRM1-215ENST00000488317 PLCG1P19174 1290 aa6.97□□□□□ -1.29
SRRM1-215ENST00000488317 PDE4BQ07343 736 aa6.97□□□□□ -1.29
SRRM1-215ENST00000488317 LYPD4Q6UWN0 246 aa6.97□□□□□ -1.29
SRRM1-215ENST00000488317 C12orf40Q86WS4 652 aa6.97□□□□□ -1.29
SRRM1-215ENST00000488317 DCAF11Q8TEB1 546 aa6.97□□□□□ -1.29
SRRM1-215ENST00000488317 DEPDC7Q96QD5 511 aa6.97□□□□□ -1.29
SRRM1-215ENST00000488317 LRRC4BQ9NT99 713 aa6.97□□□□□ -1.29
SRRM1-215ENST00000488317 SELPP16109 830 aa6.96□□□□□ -1.3
SRRM1-215ENST00000488317 FXNQ16595 210 aa6.96□□□□□ -1.3
SRRM1-215ENST00000488317 DUOXA2Q1HG44 320 aa6.96□□□□□ -1.3
SRRM1-215ENST00000488317 KIF4BQ2VIQ3 1234 aa6.96□□□□□ -1.3
SRRM1-215ENST00000488317 SDE2Q6IQ49 451 aa6.96□□□□□ -1.3
SRRM1-215ENST00000488317 RUFY4Q6ZNE9 571 aa6.96□□□□□ -1.3
SRRM1-215ENST00000488317 RBBP8NLQ8NC74 664 aaPredicted RBP6.96□□□□□ -1.3
SRRM1-215ENST00000488317 NEDD1Q8NHV4 660 aa6.96□□□□□ -1.3
SRRM1-215ENST00000488317 ANTXR1Q9H6X2 564 aa6.96□□□□□ -1.3
SRRM1-215ENST00000488317 SNTG2Q9NY99 539 aa6.96□□□□□ -1.3
SRRM1-215ENST00000488317 TBX22Q9Y458 520 aa6.96□□□□□ -1.3
SRRM1-215ENST00000488317 ADAM11O75078 769 aa6.95□□□□□ -1.3
SRRM1-215ENST00000488317 AOC2O75106 756 aa6.95□□□□□ -1.3
SRRM1-215ENST00000488317 HMGB1P09429 215 aaKnown RBP6.95□□□□□ -1.3
SRRM1-215ENST00000488317 ETF1P62495 437 aaKnown RBP6.95□□□□□ -1.3
SRRM1-215ENST00000488317 RAC1P63000 192 aa6.95□□□□□ -1.3
SRRM1-215ENST00000488317 DDR2Q16832 855 aa6.95□□□□□ -1.3
SRRM1-215ENST00000488317 FOXD4L6Q3SYB3 417 aaPredicted RBP6.95□□□□□ -1.3
SRRM1-215ENST00000488317 FOXD4L3Q6VB84 417 aaPredicted RBP6.95□□□□□ -1.3
SRRM1-215ENST00000488317 CELF2-AS1Q8N7Q2 184 aa6.95□□□□□ -1.3
SRRM1-215ENST00000488317 PUS7Q96PZ0 661 aaKnown RBP6.95□□□□□ -1.3
SRRM1-215ENST00000488317 WDR18Q9BV38 432 aa6.95□□□□□ -1.3
SRRM1-215ENST00000488317 TNKS2Q9H2K2 1166 aa6.95□□□□□ -1.3
SRRM1-215ENST00000488317 KCNK4Q9NYG8 393 aa6.95□□□□□ -1.3
SRRM1-215ENST00000488317 REV1Q9UBZ9 1251 aa6.95□□□□□ -1.3
SRRM1-215ENST00000488317 MRPL42Q9Y6G3 142 aaKnown RBP6.95□□□□□ -1.3
SRRM1-215ENST00000488317 DEAF1O75398 565 aaPredicted RBP6.94□□□□□ -1.3
SRRM1-215ENST00000488317 DDAH1O94760 285 aa6.94□□□□□ -1.3
SRRM1-215ENST00000488317 CLSTN1O94985 981 aa6.94□□□□□ -1.3
SRRM1-215ENST00000488317 DLGAP3O95886 979 aa6.94□□□□□ -1.3
SRRM1-215ENST00000488317 PGRP06401 933 aa6.94□□□□□ -1.3
SRRM1-215ENST00000488317 GRK4P32298 578 aa6.94□□□□□ -1.3
SRRM1-215ENST00000488317 GMPRP36959 345 aa6.94□□□□□ -1.3
SRRM1-215ENST00000488317 IFRD2Q12894 506 aaPredicted RBP6.94□□□□□ -1.3
SRRM1-215ENST00000488317 ZC3H12AQ5D1E8 599 aaKnown RBP6.94□□□□□ -1.3
SRRM1-215ENST00000488317 AKAP4Q5JQC9 854 aa6.94□□□□□ -1.3
SRRM1-215ENST00000488317 EXOSC6Q5RKV6 272 aaKnown RBP6.94□□□□□ -1.3
SRRM1-215ENST00000488317 CYFIP1Q7L576 1253 aa6.94□□□□□ -1.3
SRRM1-215ENST00000488317 JAZF1Q86VZ6 243 aa6.94□□□□□ -1.3
SRRM1-215ENST00000488317 DTWD1Q8N5C7 304 aa6.94□□□□□ -1.3
SRRM1-215ENST00000488317 ZSCAN1Q8NBB4 408 aa6.94□□□□□ -1.3
SRRM1-215ENST00000488317 UBASH3BQ8TF42 649 aa6.94□□□□□ -1.3
SRRM1-215ENST00000488317 TMEM40Q8WWA1 233 aa6.94□□□□□ -1.3
SRRM1-215ENST00000488317 ENAMQ9NRM1 1142 aa6.94□□□□□ -1.3
SRRM1-215ENST00000488317 KLHL3Q9UH77 587 aa6.94□□□□□ -1.3
SRRM1-215ENST00000488317 TACC3Q9Y6A5 838 aa6.94□□□□□ -1.3
SRRM1-215ENST00000488317 PRR36Q9H6K5 1346 aa6.94□□□□□ -1.3
SRRM1-215ENST00000488317 FAM221BA6H8Z2 402 aa6.93□□□□□ -1.3
SRRM1-215ENST00000488317 ANKRD62A6NC57 917 aa6.93□□□□□ -1.3
SRRM1-215ENST00000488317 GUCY2CP25092 1073 aa6.93□□□□□ -1.3
SRRM1-215ENST00000488317 CASP7P55210 303 aa6.93□□□□□ -1.3
SRRM1-215ENST00000488317 CHMP4BP1P59074 171 aa6.93□□□□□ -1.3
SRRM1-215ENST00000488317 ID3Q02535 119 aa6.93□□□□□ -1.3
SRRM1-215ENST00000488317 COL9A3Q14050 684 aaPredicted RBP6.93□□□□□ -1.3
SRRM1-215ENST00000488317 LRP10Q7Z4F1 713 aa6.93□□□□□ -1.3
SRRM1-215ENST00000488317 TTC6Q86TZ1 520 aa6.93□□□□□ -1.3
SRRM1-215ENST00000488317 FBXO11Q86XK2 927 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms