RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 LRRFIP1Q32MZ4 808 aaKnown RBP7.04□□□□□ -1.28
TM9SF3-202ENST00000443638 FOXB2Q5VYV0 432 aa7.04□□□□□ -1.28
TM9SF3-202ENST00000443638 LLGL2Q6P1M3 1020 aa7.04□□□□□ -1.28
TM9SF3-202ENST00000443638 TSHZ1Q6ZSZ6 1077 aa7.04□□□□□ -1.28
TM9SF3-202ENST00000443638 TICAM2Q86XR7 235 aa7.04□□□□□ -1.28
TM9SF3-202ENST00000443638 SULF2Q8IWU5 870 aa7.04□□□□□ -1.28
TM9SF3-202ENST00000443638 TMEM40Q8WWA1 233 aa7.04□□□□□ -1.28
TM9SF3-202ENST00000443638 KISS1RQ969F8 398 aaPredicted RBP7.04□□□□□ -1.28
TM9SF3-202ENST00000443638 KIF2CQ99661 725 aa7.04□□□□□ -1.28
TM9SF3-202ENST00000443638 PBX4Q9BYU1 374 aa7.04□□□□□ -1.28
TM9SF3-202ENST00000443638 GPAMQ9HCL2 828 aa7.04□□□□□ -1.28
TM9SF3-202ENST00000443638 CACNA2D2Q9NY47 1150 aa7.04□□□□□ -1.28
TM9SF3-202ENST00000443638 EYA4O95677 639 aa7.03□□□□□ -1.28
TM9SF3-202ENST00000443638 F11P03951 625 aa7.03□□□□□ -1.28
TM9SF3-202ENST00000443638 THBS1P07996 1170 aa7.03□□□□□ -1.28
TM9SF3-202ENST00000443638 ACRP10323 421 aa7.03□□□□□ -1.28
TM9SF3-202ENST00000443638 SELPP16109 830 aa7.03□□□□□ -1.28
TM9SF3-202ENST00000443638 ARNTP27540 789 aa7.03□□□□□ -1.28
TM9SF3-202ENST00000443638 ZNF157P51786 506 aaPredicted RBP7.03□□□□□ -1.28
TM9SF3-202ENST00000443638 NRLP54845 237 aa7.03□□□□□ -1.28
TM9SF3-202ENST00000443638 LAMC2Q13753 1193 aa7.03□□□□□ -1.28
TM9SF3-202ENST00000443638 FAM50AQ14320 339 aaKnown RBP7.03□□□□□ -1.28
TM9SF3-202ENST00000443638 PPP2R5AQ15172 486 aa7.03□□□□□ -1.28
TM9SF3-202ENST00000443638 LRRC41Q15345 812 aa7.03□□□□□ -1.28
TM9SF3-202ENST00000443638 LRRC47Q8N1G4 583 aaKnown RBP7.03□□□□□ -1.28
TM9SF3-202ENST00000443638 UBR7Q8N806 425 aa7.03□□□□□ -1.28
TM9SF3-202ENST00000443638 ASPSCR1Q9BZE9 553 aa7.03□□□□□ -1.28
TM9SF3-202ENST00000443638 CLEC4MQ9H2X3 399 aaPredicted RBP7.03□□□□□ -1.28
TM9SF3-202ENST00000443638 NCOA5Q9HCD5 579 aaKnown RBP7.03□□□□□ -1.28
TM9SF3-202ENST00000443638 TOR4AQ9NXH8 423 aa7.03□□□□□ -1.28
TM9SF3-202ENST00000443638 LTBP3Q9NS15 1303 aa7.02□□□□□ -1.28
TM9SF3-202ENST00000443638 PLD2O14939 933 aa7.02□□□□□ -1.29
TM9SF3-202ENST00000443638 SUSD5O60279 629 aa7.02□□□□□ -1.29
TM9SF3-202ENST00000443638 GRIN3BO60391 1043 aa7.02□□□□□ -1.29
TM9SF3-202ENST00000443638 FOXC1Q12948 553 aa7.02□□□□□ -1.29
TM9SF3-202ENST00000443638 UBAP2LQ14157 1087 aaKnown RBP7.02□□□□□ -1.29
TM9SF3-202ENST00000443638 LBRQ14739 615 aaKnown RBP7.02□□□□□ -1.29
TM9SF3-202ENST00000443638 ZYXQ15942 572 aaKnown RBP7.02□□□□□ -1.29
TM9SF3-202ENST00000443638 ZNF423Q2M1K9 1284 aa7.02□□□□□ -1.29
TM9SF3-202ENST00000443638 C4orf46Q504U0 113 aa7.02□□□□□ -1.29
TM9SF3-202ENST00000443638 FNDC3BQ53EP0 1204 aaKnown RBP7.02□□□□□ -1.29
TM9SF3-202ENST00000443638 DIEXFQ68CQ4 756 aaKnown RBP7.02□□□□□ -1.29
TM9SF3-202ENST00000443638 ADAMTSL4Q6UY14 1074 aa7.02□□□□□ -1.29
TM9SF3-202ENST00000443638 DHX32Q7L7V1 743 aaKnown RBP7.02□□□□□ -1.29
TM9SF3-202ENST00000443638 PDZD3Q86UT5 571 aa7.02□□□□□ -1.29
TM9SF3-202ENST00000443638 WDR75Q8IWA0 830 aaKnown RBP7.02□□□□□ -1.29
TM9SF3-202ENST00000443638 CRIPAKQ8N1N5 446 aa7.02□□□□□ -1.29
TM9SF3-202ENST00000443638 ZSCAN1Q8NBB4 408 aa7.02□□□□□ -1.29
TM9SF3-202ENST00000443638 ASAP3Q8TDY4 903 aa7.02□□□□□ -1.29
TM9SF3-202ENST00000443638 EXOC2Q96KP1 924 aa7.02□□□□□ -1.29
TM9SF3-202ENST00000443638 NSUN5Q96P11 429 aaKnown RBP7.02□□□□□ -1.29
TM9SF3-202ENST00000443638 AAASQ9NRG9 546 aa7.02□□□□□ -1.29
TM9SF3-202ENST00000443638 STRN4Q9NRL3 753 aa7.02□□□□□ -1.29
TM9SF3-202ENST00000443638 DYRK1BQ9Y463 629 aa7.02□□□□□ -1.29
TM9SF3-202ENST00000443638 SLC12A7Q9Y666 1083 aa7.02□□□□□ -1.29
TM9SF3-202ENST00000443638 SHTN1A0MZ66 631 aa7.01□□□□□ -1.29
TM9SF3-202ENST00000443638 FAM83GA6ND36 823 aa7.01□□□□□ -1.29
TM9SF3-202ENST00000443638 CAND2O75155 1236 aa7.01□□□□□ -1.29
TM9SF3-202ENST00000443638 HTR3BO95264 441 aa7.01□□□□□ -1.29
TM9SF3-202ENST00000443638 SCGB1D2O95969 90 aa7.01□□□□□ -1.29
TM9SF3-202ENST00000443638 PCDH1Q08174 1060 aa7.01□□□□□ -1.29
TM9SF3-202ENST00000443638 INTS3Q68E01 1043 aaKnown RBP7.01□□□□□ -1.29
TM9SF3-202ENST00000443638 VHLLQ6RSH7 139 aa7.01□□□□□ -1.29
TM9SF3-202ENST00000443638 KLHL6Q8WZ60 621 aa7.01□□□□□ -1.29
TM9SF3-202ENST00000443638 CLUHP3Q96NS8 147 aa7.01□□□□□ -1.29
TM9SF3-202ENST00000443638 RUSC1Q9BVN2 902 aa7.01□□□□□ -1.29
TM9SF3-202ENST00000443638 TARS2Q9BW92 718 aaKnown RBP7.01□□□□□ -1.29
TM9SF3-202ENST00000443638 RASSF4Q9H2L5 321 aa7.01□□□□□ -1.29
TM9SF3-202ENST00000443638 ARNT2Q9HBZ2 717 aa7.01□□□□□ -1.29
TM9SF3-202ENST00000443638 DNAJC25-GNG10A0A024R161 153 aa7□□□□□ -1.29
TM9SF3-202ENST00000443638 IQCA1LA6NCM1 817 aa7□□□□□ -1.29
TM9SF3-202ENST00000443638 GFRA2O00451 464 aa7□□□□□ -1.29
TM9SF3-202ENST00000443638 ATXN7O15265 892 aaPredicted RBP7□□□□□ -1.29
TM9SF3-202ENST00000443638 RASGRP1O95267 797 aa7□□□□□ -1.29
TM9SF3-202ENST00000443638 GUCY2FP51841 1108 aa7□□□□□ -1.29
TM9SF3-202ENST00000443638 GPLD1P80108 840 aa7□□□□□ -1.29
TM9SF3-202ENST00000443638 ATP11AP98196 1134 aa7□□□□□ -1.29
TM9SF3-202ENST00000443638 TNP2Q05952 138 aa7□□□□□ -1.29
TM9SF3-202ENST00000443638 CT47A1Q5JQC4 288 aaPredicted RBP7□□□□□ -1.29
TM9SF3-202ENST00000443638 TREML4Q6UXN2 200 aa7□□□□□ -1.29
TM9SF3-202ENST00000443638 UNC5AQ6ZN44 842 aa7□□□□□ -1.29
TM9SF3-202ENST00000443638 VN1R5Q7Z5H4 357 aa7□□□□□ -1.29
TM9SF3-202ENST00000443638 APBB1IPQ7Z5R6 666 aaPredicted RBP7□□□□□ -1.29
TM9SF3-202ENST00000443638 BSNDQ8WZ55 320 aa7□□□□□ -1.29
TM9SF3-202ENST00000443638 HPS1Q92902 700 aa7□□□□□ -1.29
TM9SF3-202ENST00000443638 POP1Q99575 1024 aaKnown RBP7□□□□□ -1.29
TM9SF3-202ENST00000443638 EMILIN2Q9BXX0 1053 aa7□□□□□ -1.29
TM9SF3-202ENST00000443638 PHAXQ9H814 394 aaKnown RBP7□□□□□ -1.29
TM9SF3-202ENST00000443638 TTC24A2A3L6 582 aaPredicted RBP6.99□□□□□ -1.29
TM9SF3-202ENST00000443638 ST8SIA5O15466 376 aa6.99□□□□□ -1.29
TM9SF3-202ENST00000443638 PPFIA4O75335 1185 aa6.99□□□□□ -1.29
TM9SF3-202ENST00000443638 UPP2O95045 317 aa6.99□□□□□ -1.29
TM9SF3-202ENST00000443638 RAPGEF3O95398 923 aa6.99□□□□□ -1.29
TM9SF3-202ENST00000443638 L1CAMP32004 1257 aa6.99□□□□□ -1.29
TM9SF3-202ENST00000443638 RAB27AP51159 221 aa6.99□□□□□ -1.29
TM9SF3-202ENST00000443638 SPEM2Q0P670 501 aa6.99□□□□□ -1.29
TM9SF3-202ENST00000443638 HLTFQ14527 1009 aaKnown RBP eCLIP6.99□□□□□ -1.29
TM9SF3-202ENST00000443638 LCE2AQ5TA79 106 aaPredicted RBP6.99□□□□□ -1.29
TM9SF3-202ENST00000443638 FIGNL1Q6PIW4 674 aa6.99□□□□□ -1.29
TM9SF3-202ENST00000443638 MPRIPQ6WCQ1 1025 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms