RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 ERVV-1B6SEH8 477 aa13.64□□□□□ -0.23
CD44-209ENST00000433892 SLC5A1P13866 664 aa13.64□□□□□ -0.23
CD44-209ENST00000433892 RRP12Q5JTH9 1297 aaKnown RBP13.64□□□□□ -0.23
CD44-209ENST00000433892 ZNF34Q8IZ26 560 aa13.64□□□□□ -0.23
CD44-209ENST00000433892 RGS22Q8NE09 1264 aa13.64□□□□□ -0.23
CD44-209ENST00000433892 SEC31BQ9NQW1 1179 aa13.64□□□□□ -0.23
CD44-209ENST00000433892 LIFRP42702 1097 aa13.63□□□□□ -0.23
CD44-209ENST00000433892 SSRP1Q08945 709 aaKnown RBP13.63□□□□□ -0.23
CD44-209ENST00000433892 RESP18Q5W5W9 173 aa13.63□□□□□ -0.23
CD44-209ENST00000433892 MPHOSPH8Q99549 860 aa13.63□□□□□ -0.23
CD44-209ENST00000433892 ZKSCAN3Q9BRR0 538 aa13.63□□□□□ -0.23
CD44-209ENST00000433892 HSD3B7Q9H2F3 369 aa13.63□□□□□ -0.23
CD44-209ENST00000433892 TOMM22Q9NS69 142 aa13.63□□□□□ -0.23
CD44-209ENST00000433892 TUBE1Q9UJT0 475 aa13.63□□□□□ -0.23
CD44-209ENST00000433892 GSG1L2A8MUP6 293 aa13.62□□□□□ -0.23
CD44-209ENST00000433892 SFPQP23246 707 aaKnown RBP eCLIP13.62□□□□□ -0.23
CD44-209ENST00000433892 GUCY1A2P33402 732 aa13.62□□□□□ -0.23
CD44-209ENST00000433892 IL6STP40189 918 aaPredicted RBP13.62□□□□□ -0.23
CD44-209ENST00000433892 FANCCQ00597 558 aa13.62□□□□□ -0.23
CD44-209ENST00000433892 SYCP1Q15431 976 aa13.62□□□□□ -0.23
CD44-209ENST00000433892 LONRF3Q496Y0 759 aa13.62□□□□□ -0.23
CD44-209ENST00000433892 AKNAD1Q5T1N1 836 aa13.62□□□□□ -0.23
CD44-209ENST00000433892 SUSD4Q5VX71 490 aa13.62□□□□□ -0.23
CD44-209ENST00000433892 E4F1Q66K89 784 aaPredicted RBP13.62□□□□□ -0.23
CD44-209ENST00000433892 SMAP1Q8IYB5 467 aaPredicted RBP13.62□□□□□ -0.23
CD44-209ENST00000433892 CCDC82Q8N4S0 544 aa13.62□□□□□ -0.23
CD44-209ENST00000433892 NUP98P52948 1817 aa13.62□□□□□ -0.23
CD44-209ENST00000433892 IKBKBO14920 756 aa13.62□□□□□ -0.23
CD44-209ENST00000433892 BCAMP50895 628 aa13.62□□□□□ -0.23
CD44-209ENST00000433892 SPECC1Q5M775 1068 aa13.62□□□□□ -0.23
CD44-209ENST00000433892 MFSD6Q6ZSS7 791 aa13.62□□□□□ -0.23
CD44-209ENST00000433892 CCDC150Q8NCX0 1101 aa13.62□□□□□ -0.23
CD44-209ENST00000433892 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.62□□□□□ -0.23
CD44-209ENST00000433892 ANKRD36CQ5JPF3 1778 aa13.61□□□□□ -0.23
CD44-209ENST00000433892 BTBD18B2RXH4 712 aa13.61□□□□□ -0.23
CD44-209ENST00000433892 FMNL1O95466 1100 aaPredicted RBP13.61□□□□□ -0.23
CD44-209ENST00000433892 TDO2P48775 406 aa13.61□□□□□ -0.23
CD44-209ENST00000433892 METTL16Q86W50 562 aaKnown RBP13.61□□□□□ -0.23
CD44-209ENST00000433892 CMTR1Q8N1G2 835 aaKnown RBP13.61□□□□□ -0.23
CD44-209ENST00000433892 LCORLQ8N3X6 602 aa13.61□□□□□ -0.23
CD44-209ENST00000433892 CNNM2Q9H8M5 875 aa13.61□□□□□ -0.23
CD44-209ENST00000433892 KCND1Q9NSA2 647 aa13.61□□□□□ -0.23
CD44-209ENST00000433892 KCNH3Q9ULD8 1083 aa13.61□□□□□ -0.23
CD44-209ENST00000433892 KCNJ14Q9UNX9 436 aa13.61□□□□□ -0.23
CD44-209ENST00000433892 SLC4A4Q9Y6R1 1079 aa13.61□□□□□ -0.23
CD44-209ENST00000433892 A0A0G2JS52 829 aa13.61□□□□□ -0.23
CD44-209ENST00000433892 FAM237AA0A1B0GTK4 181 aa13.61□□□□□ -0.23
CD44-209ENST00000433892 EXOC5O00471 708 aa13.61□□□□□ -0.23
CD44-209ENST00000433892 CUTAO60888 179 aa13.61□□□□□ -0.23
CD44-209ENST00000433892 FOXP4Q8IVH2 680 aaPredicted RBP13.61□□□□□ -0.23
CD44-209ENST00000433892 NOSTRINQ8IVI9 506 aa13.61□□□□□ -0.23
CD44-209ENST00000433892 MIGA1Q8NAN2 632 aa13.61□□□□□ -0.23
CD44-209ENST00000433892 CNNM3Q8NE01 707 aa13.61□□□□□ -0.23
CD44-209ENST00000433892 KIF18AQ8NI77 898 aa13.61□□□□□ -0.23
CD44-209ENST00000433892 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.61□□□□□ -0.23
CD44-209ENST00000433892 ZNF215Q9UL58 517 aaPredicted RBP13.61□□□□□ -0.23
CD44-209ENST00000433892 V9GYY5 206 aaPredicted RBP13.61□□□□□ -0.23
CD44-209ENST00000433892 SLIT2O94813 1529 aa13.61□□□□□ -0.23
CD44-209ENST00000433892 IFNAR1P17181 557 aa13.6□□□□□ -0.23
CD44-209ENST00000433892 MYL5Q02045 173 aa13.6□□□□□ -0.23
CD44-209ENST00000433892 KRBA2Q6ZNG9 492 aa13.6□□□□□ -0.23
CD44-209ENST00000433892 DPF2Q92785 391 aa13.6□□□□□ -0.23
CD44-209ENST00000433892 PPP1R13BQ96KQ4 1090 aa13.6□□□□□ -0.23
CD44-209ENST00000433892 KRT23Q9C075 422 aa13.6□□□□□ -0.23
CD44-209ENST00000433892 STK36Q9NRP7 1315 aa13.6□□□□□ -0.23
CD44-209ENST00000433892 FOXN1O15353 648 aa13.6□□□□□ -0.23
CD44-209ENST00000433892 SERPINC1P01008 464 aa13.6□□□□□ -0.23
CD44-209ENST00000433892 MMP1P03956 469 aa13.6□□□□□ -0.23
CD44-209ENST00000433892 TOB1P50616 345 aaPredicted RBP13.6□□□□□ -0.23
CD44-209ENST00000433892 UBASH3AP57075 661 aa13.6□□□□□ -0.23
CD44-209ENST00000433892 DIS3L2Q8IYB7 885 aaKnown RBP13.6□□□□□ -0.23
CD44-209ENST00000433892 KRI1Q8N9T8 703 aaKnown RBP13.6□□□□□ -0.23
CD44-209ENST00000433892 NACAP1Q9BZK3 213 aa13.6□□□□□ -0.23
CD44-209ENST00000433892 PCDHA5Q9Y5H7 936 aa13.6□□□□□ -0.23
CD44-209ENST00000433892 GRIN1Q05586 938 aa13.59□□□□□ -0.23
CD44-209ENST00000433892 WTAPQ15007 396 aa13.59□□□□□ -0.23
CD44-209ENST00000433892 SAFBQ15424 915 aaKnown RBP eCLIP13.59□□□□□ -0.23
CD44-209ENST00000433892 RTN1Q16799 776 aa13.59□□□□□ -0.23
CD44-209ENST00000433892 PTPN21Q16825 1174 aa13.59□□□□□ -0.23
CD44-209ENST00000433892 ECM29Q5VYK3 1845 aa13.59□□□□□ -0.23
CD44-209ENST00000433892 DISP2A7MBM2 1401 aa13.59□□□□□ -0.23
CD44-209ENST00000433892 EIF5P55010 431 aaKnown RBP13.59□□□□□ -0.23
CD44-209ENST00000433892 SART3Q15020 963 aaKnown RBP13.59□□□□□ -0.23
CD44-209ENST00000433892 CFAP100Q494V2 611 aa13.59□□□□□ -0.23
CD44-209ENST00000433892 OLFM4Q6UX06 510 aa13.59□□□□□ -0.23
CD44-209ENST00000433892 TRIM22Q8IYM9 498 aa13.59□□□□□ -0.23
CD44-209ENST00000433892 STAG1Q8WVM7 1258 aa13.59□□□□□ -0.23
CD44-209ENST00000433892 WASF1Q92558 559 aa13.59□□□□□ -0.23
CD44-209ENST00000433892 AK7Q96M32 723 aa13.59□□□□□ -0.23
CD44-209ENST00000433892 UTP14AQ9BVJ6 771 aaKnown RBP13.59□□□□□ -0.23
CD44-209ENST00000433892 FANCLQ9NW38 375 aa13.59□□□□□ -0.23
CD44-209ENST00000433892 LRP2BPQ9P2M1 347 aa13.59□□□□□ -0.23
CD44-209ENST00000433892 IQSEC3Q9UPP2 1182 aaPredicted RBP13.59□□□□□ -0.23
CD44-209ENST00000433892 BMP6P22004 513 aa13.58□□□□□ -0.24
CD44-209ENST00000433892 NR5A1Q13285 461 aa13.58□□□□□ -0.24
CD44-209ENST00000433892 NUP133Q8WUM0 1156 aa13.58□□□□□ -0.24
CD44-209ENST00000433892 CGNQ9P2M7 1197 aaKnown RBP13.58□□□□□ -0.24
CD44-209ENST00000433892 LRP5O75197 1615 aa13.58□□□□□ -0.24
CD44-209ENST00000433892 ERICH2A1L162 156 aa13.57□□□□□ -0.24
CD44-209ENST00000433892 ZSCAN20P17040 1043 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms