RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 PRKAG2Q9UGJ0 569 aa2.99□□□□□ -1.93
RNU4-53P-201ENST00000410828 IQSEC3Q9UPP2 1182 aaPredicted RBP2.99□□□□□ -1.93
RNU4-53P-201ENST00000410828 AGTPBP1Q9UPW5 1226 aa2.99□□□□□ -1.93
RNU4-53P-201ENST00000410828 AFG3L2Q9Y4W6 797 aa2.99□□□□□ -1.93
RNU4-53P-201ENST00000410828 LRRFIP2Q9Y608 721 aaKnown RBP2.99□□□□□ -1.93
RNU4-53P-201ENST00000410828 ZNF646O15015 1829 aaPredicted RBP2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 PFASO15067 1338 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 MYBBP1AQ9BQG0 1328 aaKnown RBP2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 VCANP13611 3396 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 DLG5Q8TDM6 1919 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 TRIM75PA6NK02 468 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 TNFRSF10AO00220 468 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 GRM8O00222 908 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 CTNND1O60716 968 aaKnown RBP2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 ENTPD3O75355 529 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 IFIT1P09914 478 aaKnown RBP2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 COL6A1P12109 1028 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 XRCC5P13010 732 aaKnown RBP2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 PRKAR2AP13861 404 aaKnown RBP2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 FOSL2P15408 326 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 CYP2B6P20813 491 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 NFIAQ12857 509 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 TRIM32Q13049 653 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 PABPC4Q13310 644 aaKnown RBP eCLIP2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 PDE3AQ14432 1141 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 LRRC26Q2I0M4 334 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 METTL24Q5JXM2 366 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 EPHA10Q5JZY3 1008 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 BEND3Q5T5X7 828 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 MAP3K21Q5TCX8 1036 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 CCAR1Q8IX12 1150 aaKnown RBP2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 TRMT44Q8IYL2 757 aaKnown RBP2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 PROCA1Q8NCQ7 364 aaPredicted RBP2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 SOCS4Q8WXH5 440 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 MYLIPQ8WY64 445 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 TRIB2Q92519 343 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 FAM122AQ96E09 287 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 NUDT12Q9BQG2 462 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 IDI2Q9BXS1 227 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 PUS3Q9BZE2 481 aaKnown RBP2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 SPINK5Q9NQ38 1064 aaPredicted RBP2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 USP40Q9NVE5 1235 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 C9orf78Q9NZ63 289 aaPredicted RBP2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 FAM198AQ9UFP1 575 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 GJD2Q9UKL4 321 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 DAGLAQ9Y4D2 1042 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 UNC80Q8N2C7 3258 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 MUC6Q6W4X9 2439 aa2.98□□□□□ -1.93
RNU4-53P-201ENST00000410828 KIF16BQ96L93 1317 aa2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 TMEM265A0A087WTH1 108 aa2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 F6X3S4 739 aa2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 TBC1D12O60347 775 aa2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 MSCO60682 206 aa2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 ALDH1L1O75891 902 aa2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 PDE8BO95263 885 aa2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 LDHBP07195 334 aaKnown RBP2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 SLC5A1P13866 664 aa2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 ZKSCAN1P17029 563 aaPredicted RBP2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 PRDX5P30044 214 aa2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 MAPK4P31152 587 aa2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 PLA2G5P39877 138 aa2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 RGS3P49796 1198 aa2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 IRX3P78415 501 aaPredicted RBP2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 SMAD3P84022 425 aaKnown RBP2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 MAP3K10Q02779 954 aa2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 SPP2Q13103 211 aa2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 PUM3Q15397 648 aaKnown RBP2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 SHHQ15465 462 aa2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 DIXDC1Q155Q3 683 aa2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 TREML2Q5T2D2 321 aa2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 MFSD14CQ5VZR4 134 aa2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 LHX8Q68G74 356 aa2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 ZFPM1Q8IX07 1006 aa2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 ZNF280CQ8ND82 737 aa2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 GPRC5AQ8NFJ5 357 aa2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 ATXN2LQ8WWM7 1075 aaKnown RBP2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 TSR2Q969E8 191 aaKnown RBP2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 TBC1D2Q9BYX2 928 aa2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 SENP6Q9GZR1 1112 aaPredicted RBP2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 ASCC2Q9H1I8 757 aaPredicted RBP2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 AS3MTQ9HBK9 375 aa2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 GNL3LQ9NVN8 582 aaKnown RBP2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 MORF4L1Q9UBU8 362 aa2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 PTPRZ1P23471 2315 aaPredicted RBP2.97□□□□□ -1.93
RNU4-53P-201ENST00000410828 PRUNE2Q8WUY3 3088 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 DDTLA6NHG4 134 aaPredicted RBP2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 USP17L5A8MUK1 530 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 DNM1LO00429 736 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 SEMA3EO15041 775 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 VAMP4O75379 141 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 GLRX3O76003 335 aaKnown RBP2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 FGFR2P21802 821 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 CCND3P30281 292 aaPredicted RBP2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 HOXA7P31268 230 aaPredicted RBP2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 HOXD11P31277 338 aaPredicted RBP2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 RGS2P41220 211 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 ATN1P54259 1190 aaPredicted RBP2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 HMGCS2P54868 508 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 RTP1P59025 263 aa2.96□□□□□ -1.94
RNU4-53P-201ENST00000410828 CCNA1P78396 465 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms