RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 NFE2Q16621 373 aaPredicted RBP4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 C21orf62-AS1Q17RA5 79 aa4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 FNDC3BQ53EP0 1204 aaKnown RBP4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 C6orf118Q5T5N4 469 aa4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 WWC2Q6AWC2 1192 aa4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 MRM1Q6IN84 353 aaKnown RBP4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 VHLLQ6RSH7 139 aa4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 TMEM40Q8WWA1 233 aa4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 HPS1Q92902 700 aa4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 NSUN5Q96P11 429 aaKnown RBP4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 KIF2CQ99661 725 aa4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 SPOCK3Q9BQ16 436 aa4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 RASSF4Q9H2L5 321 aa4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 PHAXQ9H814 394 aaKnown RBP4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 MAPRE3Q9UPY8 281 aa4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 PRR36Q9H6K5 1346 aa4.96□□□□□ -1.62
RNU6-1249P-201ENST00000363237 UPK3BL1B0FP48 263 aa4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 UPK3BL2E5RIL1 263 aa4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 AGRPO00253 132 aa4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 IRS4O14654 1257 aaPredicted RBP4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 PLD2O14939 933 aa4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 ADCY3O60266 1144 aa4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 GRIN3BO60391 1043 aa4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 GFRA3O60609 400 aa4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 PDE8AO60658 829 aa4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 SMNDC1O75940 238 aaKnown RBP eCLIP4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 GHRHP01286 108 aa4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 MAPTP10636 758 aaKnown RBP4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 RHBDL3P58872 404 aa4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 GPLD1P80108 840 aa4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 ZNF252P-AS1Q0IIN9 211 aa4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 HLTFQ14527 1009 aaKnown RBP eCLIP4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 TTF1Q15361 905 aaPredicted RBP4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 AKAP4Q5JQC9 854 aa4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 MRPL14Q6P1L8 145 aaKnown RBP4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 GRIN3AQ8TCU5 1115 aa4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 BHMTQ93088 406 aa4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 POP1Q99575 1024 aaKnown RBP4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 RUSC1Q9BVN2 902 aa4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 FAM126AQ9BYI3 521 aaPredicted RBP4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 STK17AQ9UEE5 414 aa4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 SOS2Q07890 1332 aaPredicted RBP4.95□□□□□ -1.62
RNU6-1249P-201ENST00000363237 DCDC2BA2VCK2 349 aa4.94□□□□□ -1.62
RNU6-1249P-201ENST00000363237 FIGNL2A6NMB9 653 aa4.94□□□□□ -1.62
RNU6-1249P-201ENST00000363237 TSPAN6O43657 245 aa4.94□□□□□ -1.62
RNU6-1249P-201ENST00000363237 PLIN1O60240 522 aa4.94□□□□□ -1.62
RNU6-1249P-201ENST00000363237 SUSD5O60279 629 aa4.94□□□□□ -1.62
RNU6-1249P-201ENST00000363237 CAND2O75155 1236 aa4.94□□□□□ -1.62
RNU6-1249P-201ENST00000363237 SCARF1Q14162 830 aa4.94□□□□□ -1.62
RNU6-1249P-201ENST00000363237 PPP2R5AQ15172 486 aa4.94□□□□□ -1.62
RNU6-1249P-201ENST00000363237 ZNF423Q2M1K9 1284 aa4.94□□□□□ -1.62
RNU6-1249P-201ENST00000363237 LCE2AQ5TA79 106 aaPredicted RBP4.94□□□□□ -1.62
RNU6-1249P-201ENST00000363237 UNC5AQ6ZN44 842 aa4.94□□□□□ -1.62
RNU6-1249P-201ENST00000363237 RNF180Q86T96 592 aa4.94□□□□□ -1.62
RNU6-1249P-201ENST00000363237 WDR75Q8IWA0 830 aaKnown RBP4.94□□□□□ -1.62
RNU6-1249P-201ENST00000363237 ATL2Q8NHH9 583 aa4.94□□□□□ -1.62
RNU6-1249P-201ENST00000363237 STK35Q8TDR2 534 aa4.94□□□□□ -1.62
RNU6-1249P-201ENST00000363237 IPO9Q96P70 1041 aaKnown RBP4.94□□□□□ -1.62
RNU6-1249P-201ENST00000363237 RPS6KC1Q96S38 1066 aa4.94□□□□□ -1.62
RNU6-1249P-201ENST00000363237 ANTXR1Q9H6X2 564 aa4.94□□□□□ -1.62
RNU6-1249P-201ENST00000363237 NCOA5Q9HCD5 579 aaKnown RBP4.94□□□□□ -1.62
RNU6-1249P-201ENST00000363237 STRN4Q9NRL3 753 aa4.94□□□□□ -1.62
RNU6-1249P-201ENST00000363237 INTS7Q9NVH2 962 aaKnown RBP4.94□□□□□ -1.62
RNU6-1249P-201ENST00000363237 DNAJC25-GNG10A0A024R161 153 aa4.93□□□□□ -1.62
RNU6-1249P-201ENST00000363237 GSG1L2A8MUP6 293 aa4.93□□□□□ -1.62
RNU6-1249P-201ENST00000363237 H7C1W4 665 aa4.93□□□□□ -1.62
RNU6-1249P-201ENST00000363237 J3QW42 95 aa4.93□□□□□ -1.62
RNU6-1249P-201ENST00000363237 EIF4EBP3O60516 100 aaPredicted RBP4.93□□□□□ -1.62
RNU6-1249P-201ENST00000363237 HTR3BO95264 441 aa4.93□□□□□ -1.62
RNU6-1249P-201ENST00000363237 RASGRP1O95267 797 aa4.93□□□□□ -1.62
RNU6-1249P-201ENST00000363237 NME1P15531 152 aaKnown RBP4.93□□□□□ -1.62
RNU6-1249P-201ENST00000363237 GUCY2FP51841 1108 aa4.93□□□□□ -1.62
RNU6-1249P-201ENST00000363237 ATP11AP98196 1134 aa4.93□□□□□ -1.62
RNU6-1249P-201ENST00000363237 PTPN11Q06124 597 aaPredicted RBP4.93□□□□□ -1.62
RNU6-1249P-201ENST00000363237 AP3B2Q13367 1082 aa4.93□□□□□ -1.62
RNU6-1249P-201ENST00000363237 OS9Q13438 667 aaPredicted RBP4.93□□□□□ -1.62
RNU6-1249P-201ENST00000363237 FAM50AQ14320 339 aaKnown RBP4.93□□□□□ -1.62
RNU6-1249P-201ENST00000363237 SLC10A6Q3KNW5 377 aa4.93□□□□□ -1.62
RNU6-1249P-201ENST00000363237 CEP135Q66GS9 1140 aa4.93□□□□□ -1.62
RNU6-1249P-201ENST00000363237 TSR2Q969E8 191 aaKnown RBP4.93□□□□□ -1.62
RNU6-1249P-201ENST00000363237 KISS1RQ969F8 398 aaPredicted RBP4.93□□□□□ -1.62
RNU6-1249P-201ENST00000363237 APBA2Q99767 749 aa4.93□□□□□ -1.62
RNU6-1249P-201ENST00000363237 DHRS4Q9BTZ2 278 aa4.93□□□□□ -1.62
RNU6-1249P-201ENST00000363237 GMIPQ9P107 970 aa4.93□□□□□ -1.62
RNU6-1249P-201ENST00000363237 SOX13Q9UN79 622 aa4.93□□□□□ -1.62
RNU6-1249P-201ENST00000363237 TACC3Q9Y6A5 838 aa4.93□□□□□ -1.62
RNU6-1249P-201ENST00000363237 SNCAIPQ9Y6H5 919 aa4.93□□□□□ -1.62
RNU6-1249P-201ENST00000363237 FAM177BA6PVY3 158 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 ZBTB42B2RXF5 422 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 GFRA2O00451 464 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 TNFRSF10CO14798 259 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 ARAFP10398 606 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 NAT2P11245 290 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 PTPRAP18433 802 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 GNALP38405 381 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 ZNF143P52747 638 aaPredicted RBP4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 PRR20EP86478 221 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 PRR20CP86479 221 aa4.92□□□□□ -1.62
RNU6-1249P-201ENST00000363237 PRR20DP86480 221 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms