RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 ST5P78524 1137 aa18.51■□□□□ 0.55
SCAF1-201ENST00000360565 TAX1BP1Q86VP1 789 aa18.51■□□□□ 0.55
SCAF1-201ENST00000360565 NSUN7Q8NE18 718 aaKnown RBP18.51■□□□□ 0.55
SCAF1-201ENST00000360565 STAMQ92783 540 aa18.51■□□□□ 0.55
SCAF1-201ENST00000360565 VPS16Q9H269 839 aa18.51■□□□□ 0.55
SCAF1-201ENST00000360565 LUC7L2Q9Y383 392 aaKnown RBP18.51■□□□□ 0.55
SCAF1-201ENST00000360565 MRVI1Q9Y6F6 885 aa18.51■□□□□ 0.55
SCAF1-201ENST00000360565 TMCO5BA8MYB1 307 aa18.51■□□□□ 0.55
SCAF1-201ENST00000360565 IGKV5-2P06315 115 aa18.51■□□□□ 0.55
SCAF1-201ENST00000360565 HLTFQ14527 1009 aaKnown RBP eCLIP18.51■□□□□ 0.55
SCAF1-201ENST00000360565 EPHA10Q5JZY3 1008 aa18.51■□□□□ 0.55
SCAF1-201ENST00000360565 FTOQ9C0B1 505 aaKnown RBP eCLIP18.51■□□□□ 0.55
SCAF1-201ENST00000360565 LRRC27Q9C0I9 530 aa18.51■□□□□ 0.55
SCAF1-201ENST00000360565 GREM2Q9H772 168 aa18.51■□□□□ 0.55
SCAF1-201ENST00000360565 SETD1BQ9UPS6 1966 aaKnown RBP18.51■□□□□ 0.55
SCAF1-201ENST00000360565 PNOCQ13519 176 aa18.51■□□□□ 0.55
SCAF1-201ENST00000360565 TRMT44Q8IYL2 757 aaKnown RBP18.51■□□□□ 0.55
SCAF1-201ENST00000360565 GOLGA1Q92805 767 aa18.51■□□□□ 0.55
SCAF1-201ENST00000360565 IMPACTQ9P2X3 320 aa18.51■□□□□ 0.55
SCAF1-201ENST00000360565 ASAP1Q9ULH1 1129 aa18.51■□□□□ 0.55
SCAF1-201ENST00000360565 ZDHHC9Q9Y397 364 aa18.51■□□□□ 0.55
SCAF1-201ENST00000360565 MAST3O60307 1309 aa18.51■□□□□ 0.55
SCAF1-201ENST00000360565 SPAG5Q96R06 1193 aa18.5■□□□□ 0.55
SCAF1-201ENST00000360565 AATFQ9NY61 560 aaKnown RBP eCLIP18.5■□□□□ 0.55
SCAF1-201ENST00000360565 TFCP2L1Q9NZI6 479 aa18.5■□□□□ 0.55
SCAF1-201ENST00000360565 VPS54Q9P1Q0 977 aa18.5■□□□□ 0.55
SCAF1-201ENST00000360565 CNGA4Q8IV77 575 aa18.5■□□□□ 0.55
SCAF1-201ENST00000360565 GNPATO15228 680 aa18.5■□□□□ 0.55
SCAF1-201ENST00000360565 U2AF2P26368 475 aaKnown RBP eCLIP18.5■□□□□ 0.55
SCAF1-201ENST00000360565 GNA11P29992 359 aa18.5■□□□□ 0.55
SCAF1-201ENST00000360565 PHKA1P46020 1223 aa18.5■□□□□ 0.55
SCAF1-201ENST00000360565 POSTNQ15063 836 aa18.5■□□□□ 0.55
SCAF1-201ENST00000360565 LETM2Q2VYF4 491 aa18.5■□□□□ 0.55
SCAF1-201ENST00000360565 IFNL3Q8IZI9 196 aa18.5■□□□□ 0.55
SCAF1-201ENST00000360565 ZNF622Q969S3 477 aaKnown RBP eCLIP18.5■□□□□ 0.552e-9■□□□□ 10.5
SCAF1-201ENST00000360565 RRP36Q96EU6 259 aaKnown RBP18.5■□□□□ 0.55
SCAF1-201ENST00000360565 PYCARDQ9ULZ3 195 aa18.5■□□□□ 0.55
SCAF1-201ENST00000360565 POLR1AO95602 1720 aaPredicted RBP18.5■□□□□ 0.55
SCAF1-201ENST00000360565 RDXP35241 583 aaKnown RBP18.5■□□□□ 0.55
SCAF1-201ENST00000360565 WWC2Q6AWC2 1192 aa18.5■□□□□ 0.55
SCAF1-201ENST00000360565 PI16Q6UXB8 463 aa18.5■□□□□ 0.55
SCAF1-201ENST00000360565 CCDC42Q96M95 316 aa18.5■□□□□ 0.55
SCAF1-201ENST00000360565 A0A087WWV3 80 aa18.49■□□□□ 0.55
SCAF1-201ENST00000360565 CEP152O94986 1710 aa18.49■□□□□ 0.55
SCAF1-201ENST00000360565 NDUFA8P51970 172 aa18.49■□□□□ 0.55
SCAF1-201ENST00000360565 MTX1Q13505 466 aa18.49■□□□□ 0.55
SCAF1-201ENST00000360565 TNIP1Q15025 636 aa18.49■□□□□ 0.55
SCAF1-201ENST00000360565 TTC38Q5R3I4 469 aa18.49■□□□□ 0.55
SCAF1-201ENST00000360565 FEZ1Q99689 392 aa18.49■□□□□ 0.55
SCAF1-201ENST00000360565 GPR108Q9NPR9 543 aa18.49■□□□□ 0.55
SCAF1-201ENST00000360565 EVCP57679 992 aa18.49■□□□□ 0.55
SCAF1-201ENST00000360565 KRT79Q5XKE5 535 aa18.49■□□□□ 0.55
SCAF1-201ENST00000360565 CTR9Q6PD62 1173 aa18.49■□□□□ 0.55
SCAF1-201ENST00000360565 ZNF654Q8IZM8 581 aa18.49■□□□□ 0.55
SCAF1-201ENST00000360565 CEP112Q8N8E3 955 aa18.49■□□□□ 0.55
SCAF1-201ENST00000360565 TMEM94Q12767 1356 aa18.49■□□□□ 0.55
SCAF1-201ENST00000360565 BCL2L12Q9HB09 334 aa18.49■□□□□ 0.55
SCAF1-201ENST00000360565 NRBP1Q9UHY1 535 aa18.49■□□□□ 0.55
SCAF1-201ENST00000360565 CLIC4Q9Y696 253 aa18.49■□□□□ 0.55
SCAF1-201ENST00000360565 BTBD18B2RXH4 712 aa18.48■□□□□ 0.55
SCAF1-201ENST00000360565 KRT86O43790 486 aa18.48■□□□□ 0.55
SCAF1-201ENST00000360565 KIF5AQ12840 1032 aa18.48■□□□□ 0.55
SCAF1-201ENST00000360565 SAP30BPQ9UHR5 308 aaKnown RBP18.48■□□□□ 0.55
SCAF1-201ENST00000360565 FBXO3Q9UK99 471 aa18.48■□□□□ 0.55
SCAF1-201ENST00000360565 CTNND2Q9UQB3 1225 aa18.48■□□□□ 0.55
SCAF1-201ENST00000360565 LMTK2Q8IWU2 1503 aa18.48■□□□□ 0.55
SCAF1-201ENST00000360565 PDE8BO95263 885 aa18.48■□□□□ 0.55
SCAF1-201ENST00000360565 ELF2Q15723 593 aa18.48■□□□□ 0.55
SCAF1-201ENST00000360565 PODXL2Q9NZ53 605 aa18.48■□□□□ 0.55
SCAF1-201ENST00000360565 ARHGEF40Q8TER5 1519 aa18.48■□□□□ 0.55
SCAF1-201ENST00000360565 BCAMP50895 628 aa18.48■□□□□ 0.55
SCAF1-201ENST00000360565 OSBP2Q969R2 916 aa18.48■□□□□ 0.55
SCAF1-201ENST00000360565 ZC3H12CQ9C0D7 883 aaKnown RBP18.48■□□□□ 0.55
SCAF1-201ENST00000360565 SERTAD1Q9UHV2 236 aa18.48■□□□□ 0.55
SCAF1-201ENST00000360565 RHOXF2BP0C7M4 288 aa18.47■□□□□ 0.55
SCAF1-201ENST00000360565 CMA1P23946 247 aa18.47■□□□□ 0.55
SCAF1-201ENST00000360565 SSR1P43307 286 aaKnown RBP18.47■□□□□ 0.55
SCAF1-201ENST00000360565 KRT83P78385 493 aa18.47■□□□□ 0.55
SCAF1-201ENST00000360565 NOSTRINQ8IVI9 506 aa18.47■□□□□ 0.55
SCAF1-201ENST00000360565 RHOXF2Q9BQY4 288 aa18.47■□□□□ 0.55
SCAF1-201ENST00000360565 CARD6Q9BX69 1037 aa18.47■□□□□ 0.55
SCAF1-201ENST00000360565 NAA15Q9BXJ9 866 aaKnown RBP18.47■□□□□ 0.55
SCAF1-201ENST00000360565 AXIN2Q9Y2T1 843 aa18.47■□□□□ 0.55
SCAF1-201ENST00000360565 PLCG2P16885 1265 aa18.47■□□□□ 0.55
SCAF1-201ENST00000360565 SDR42E1Q8WUS8 393 aa18.47■□□□□ 0.55
SCAF1-201ENST00000360565 PPRC1Q5VV67 1664 aaKnown RBP18.47■□□□□ 0.55
SCAF1-201ENST00000360565 ARID5AQ03989 594 aa18.47■□□□□ 0.55
SCAF1-201ENST00000360565 GIGYF2Q6Y7W6 1299 aaKnown RBP18.47■□□□□ 0.55
SCAF1-201ENST00000360565 CLIC6Q96NY7 704 aa18.47■□□□□ 0.55
SCAF1-201ENST00000360565 OGFRQ9NZT2 677 aa18.47■□□□□ 0.55
SCAF1-201ENST00000360565 USP17L12C9JPN9 530 aa18.46■□□□□ 0.55
SCAF1-201ENST00000360565 USP17L21D6R901 530 aa18.46■□□□□ 0.55
SCAF1-201ENST00000360565 ARHGAP6O43182 974 aa18.46■□□□□ 0.55
SCAF1-201ENST00000360565 USP8P40818 1118 aa18.46■□□□□ 0.55
SCAF1-201ENST00000360565 CKAP4Q07065 602 aaKnown RBP18.46■□□□□ 0.55
SCAF1-201ENST00000360565 HMGB2P26583 209 aaKnown RBP18.46■□□□□ 0.55
SCAF1-201ENST00000360565 PPP2R5BQ15173 497 aa18.46■□□□□ 0.55
SCAF1-201ENST00000360565 TEX11Q8IYF3 940 aa18.46■□□□□ 0.55
SCAF1-201ENST00000360565 CAPZA3Q96KX2 299 aa18.46■□□□□ 0.55
SCAF1-201ENST00000360565 SHTN1A0MZ66 631 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms