RNA–Protein interactions for RNA: ENST00000344893.4

AC008543.1-201, humanhuman

TSL 2 BASIC

Gene AC008543.1, Length 3,383 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008543.1-201ENST00000344893 RFC4P35249 363 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 CCDC57Q2TAC2 916 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 PRPF40BQ6NWY9 871 aaKnown RBP10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 CPLX2Q6PUV4 134 aaKnown RBP10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 HNRNPLLQ8WVV9 542 aaKnown RBP10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 CLIC6Q96NY7 704 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 ABCB6Q9NP58 842 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 CNNM1Q9NRU3 951 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 GNL3LQ9NVN8 582 aaKnown RBP10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 TLR7Q9NYK1 1049 aaKnown RBP10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 COL18A1P39060 1754 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 ZSCAN12O43309 604 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 HSP90B1P14625 803 aaKnown RBP10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 SETQ01105 290 aaPredicted RBP10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 DHX8Q14562 1220 aaKnown RBP10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 LRRC24Q50LG9 513 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 CLASRPQ8N2M8 674 aaKnown RBP10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 MIEF2Q96C03 454 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 ZSWIM6Q9HCJ5 1215 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 JAG2Q9Y219 1238 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 COL16A1Q07092 1604 aaPredicted RBP10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 NHSL1Q5SYE7 1610 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 IRS4O14654 1257 aaPredicted RBP10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 ERLIN1O75477 346 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 POTEAQ6S8J7 498 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 BARGINQ6ZT62 677 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 GOLPH3LQ9H4A5 285 aa10.31□□□□□ -0.76
AC008543.1-201ENST00000344893 CHMP4BP1P59074 171 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 GOLGA8FQ08AF8 430 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 GOLGA8DPQ0D2H9 430 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 SCRN1Q12765 414 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 TFCP2Q12800 502 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 CASP8Q14790 479 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 CCDC73Q6ZRK6 1079 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 DDX11Q96FC9 970 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 KAZALD1Q96I82 304 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 TEX13AQ9BXU3 409 aaPredicted RBP10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 ANKZF1Q9H8Y5 726 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 PPP2R2CQ9Y2T4 447 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 NEBLO76041 1014 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 CALRP27797 417 aaKnown RBP10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 TCIRG1Q13488 830 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 PNKPQ96T60 521 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 SLC24A3Q9HC58 644 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 PUF60Q9UHX1 559 aaKnown RBP10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 RTCBQ9Y3I0 505 aaKnown RBP10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 FAM169AQ9Y6X4 670 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 TUBGCP6Q96RT7 1819 aa10.3□□□□□ -0.76
AC008543.1-201ENST00000344893 C21orf2O43822 256 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 TAF5LO75529 589 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 ALDH1L1O75891 902 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 CCT5P48643 541 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 DEFB132Q7Z7B7 95 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 SEC31BQ9NQW1 1179 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 ELF1P32519 619 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 MSL3Q8N5Y2 521 aaKnown RBP10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 AFAP1L1Q8TED9 768 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 CNKSR2Q8WXI2 1034 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 SMARCC1Q92922 1105 aaPredicted RBP10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 FAXDC2Q96IV6 333 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 BCL9O00512 1426 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 RAB11FIP3O75154 756 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 WDHD1O75717 1129 aaPredicted RBP10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 CHGBP05060 677 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 USP5P45974 858 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 PTH1RQ03431 593 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 EN1Q05925 392 aaPredicted RBP10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 STK3Q13188 491 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 NEDD9Q14511 834 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 DPCR1Q3MIW9 517 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 SUSD4Q5VX71 490 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 NAIF1Q69YI7 327 aaPredicted RBP10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 INTS5Q6P9B9 1019 aaKnown RBP10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 LDHAL6AQ6ZMR3 332 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 TCEANC2Q96MN5 208 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 LRRC4BQ9NT99 713 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 RBM28Q9NW13 759 aaKnown RBP10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 CFAP45Q9UL16 551 aa10.29□□□□□ -0.76
AC008543.1-201ENST00000344893 RNF40O75150 1001 aa10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 FKBP4Q02790 459 aaKnown RBP eCLIP10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 TTC19Q6DKK2 380 aaPredicted RBP10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 SLC51AQ86UW1 340 aa10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 NBPF5PQ86XG9 351 aaPredicted RBP10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 JMYQ8N9B5 988 aa10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 TBC1D22AQ8WUA7 517 aa10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 CCDC12Q8WUD4 166 aaPredicted RBP10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 KIFC2Q96AC6 838 aa10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 ACBD3Q9H3P7 528 aa10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 GREM2Q9H772 168 aa10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 MAP3K15Q6ZN16 1313 aa10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 EBAG9O00559 213 aa10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 LMOD1P29536 600 aaPredicted RBP10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 SRGAP1Q7Z6B7 1085 aa10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 STAG1Q8WVM7 1258 aa10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 N4BP2L2Q92802 583 aaPredicted RBP10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 TACO1Q9BSH4 297 aaKnown RBP10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 TM6SF1Q9BZW5 370 aa10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 FTOQ9C0B1 505 aaKnown RBP eCLIP10.28□□□□□ -0.76
AC008543.1-201ENST00000344893 RAB21Q9UL25 225 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms