RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 RAB3GAP1Q15042 981 aa13.74□□□□□ -0.21
FN1-202ENST00000336916 BTG4Q9NY30 223 aa13.74□□□□□ -0.21
FN1-202ENST00000336916 TAOK1Q7L7X3 1001 aa13.74□□□□□ -0.21
FN1-202ENST00000336916 GOLGA5Q8TBA6 731 aa13.74□□□□□ -0.21
FN1-202ENST00000336916 C16orf45Q96MC5 204 aaPredicted RBP13.74□□□□□ -0.21
FN1-202ENST00000336916 HS1BP3Q53T59 392 aa13.73□□□□□ -0.21
FN1-202ENST00000336916 TMC4Q7Z404 712 aa13.73□□□□□ -0.21
FN1-202ENST00000336916 TMX3Q96JJ7 454 aa13.73□□□□□ -0.21
FN1-202ENST00000336916 KCNA6P17658 529 aa13.73□□□□□ -0.21
FN1-202ENST00000336916 AFMP43652 599 aa13.73□□□□□ -0.21
FN1-202ENST00000336916 DPP8Q6V1X1 898 aaPredicted RBP13.73□□□□□ -0.21
FN1-202ENST00000336916 AGTPBP1Q9UPW5 1226 aa13.73□□□□□ -0.21
FN1-202ENST00000336916 CSADQ9Y600 493 aa13.73□□□□□ -0.21
FN1-202ENST00000336916 PPP2R5EQ16537 467 aa13.73□□□□□ -0.21
FN1-202ENST00000336916 MRPL50Q8N5N7 158 aaKnown RBP13.73□□□□□ -0.21
FN1-202ENST00000336916 BIN1O00499 593 aa13.73□□□□□ -0.21
FN1-202ENST00000336916 ACTN4O43707 911 aaKnown RBP13.73□□□□□ -0.21
FN1-202ENST00000336916 CACYBPQ9HB71 228 aaKnown RBP13.73□□□□□ -0.21
FN1-202ENST00000336916 UBXN1Q04323 297 aa13.73□□□□□ -0.21
FN1-202ENST00000336916 C10orf67Q8IYJ2 551 aa13.73□□□□□ -0.21
FN1-202ENST00000336916 TBC1D2Q9BYX2 928 aa13.73□□□□□ -0.21
FN1-202ENST00000336916 LUC7L2Q9Y383 392 aaKnown RBP13.73□□□□□ -0.21
FN1-202ENST00000336916 FBF1Q8TES7 1133 aa13.73□□□□□ -0.21
FN1-202ENST00000336916 CCT6BQ92526 530 aa13.73□□□□□ -0.21
FN1-202ENST00000336916 KIFC2Q96AC6 838 aa13.73□□□□□ -0.21
FN1-202ENST00000336916 FAM114A2Q9NRY5 505 aa13.73□□□□□ -0.21
FN1-202ENST00000336916 EXOC8Q8IYI6 725 aa13.72□□□□□ -0.21
FN1-202ENST00000336916 BAZ2BQ9UIF8 2168 aaKnown RBP13.72□□□□□ -0.21
FN1-202ENST00000336916 ZBTB16Q05516 673 aa13.72□□□□□ -0.21
FN1-202ENST00000336916 RAB11FIP4Q86YS3 637 aa13.72□□□□□ -0.21
FN1-202ENST00000336916 CPLX3Q8WVH0 158 aa13.72□□□□□ -0.21
FN1-202ENST00000336916 DCTPP1Q9H773 170 aa13.72□□□□□ -0.21
FN1-202ENST00000336916 CALCOCO2Q13137 446 aa13.72□□□□□ -0.21
FN1-202ENST00000336916 MUM1L1Q5H9M0 696 aa13.72□□□□□ -0.21
FN1-202ENST00000336916 NT5C3AQ9H0P0 336 aa13.72□□□□□ -0.21
FN1-202ENST00000336916 A0A1W2PP64 1363 aa13.72□□□□□ -0.21
FN1-202ENST00000336916 OTUD7BQ6GQQ9 843 aa13.72□□□□□ -0.21
FN1-202ENST00000336916 HOXA7P31268 230 aaPredicted RBP13.72□□□□□ -0.21
FN1-202ENST00000336916 BAG6P46379 1132 aa13.72□□□□□ -0.21
FN1-202ENST00000336916 LPIN2Q92539 896 aa13.72□□□□□ -0.21
FN1-202ENST00000336916 APPBP2Q92624 585 aa13.72□□□□□ -0.21
FN1-202ENST00000336916 UFL1O94874 794 aa13.72□□□□□ -0.21
FN1-202ENST00000336916 RFX1P22670 979 aa13.72□□□□□ -0.21
FN1-202ENST00000336916 GSDMBQ8TAX9 411 aa13.72□□□□□ -0.21
FN1-202ENST00000336916 CARD10Q9BWT7 1032 aa13.72□□□□□ -0.21
FN1-202ENST00000336916 GNPTABQ3T906 1256 aa13.72□□□□□ -0.21
FN1-202ENST00000336916 MMRN2Q9H8L6 949 aa13.72□□□□□ -0.21
FN1-202ENST00000336916 TFIP11Q9UBB9 837 aaKnown RBP13.72□□□□□ -0.21
FN1-202ENST00000336916 MCM7P33993 719 aa13.71□□□□□ -0.21
FN1-202ENST00000336916 DNA2P51530 1060 aa13.71□□□□□ -0.21
FN1-202ENST00000336916 MEIS3Q99687 375 aa13.71□□□□□ -0.21
FN1-202ENST00000336916 BICC1Q9H694 974 aaKnown RBP13.71□□□□□ -0.21
FN1-202ENST00000336916 CFAP157Q5JU67 520 aa13.71□□□□□ -0.21
FN1-202ENST00000336916 CREB3L3Q68CJ9 461 aa13.71□□□□□ -0.21
FN1-202ENST00000336916 PPP1R7Q15435 360 aa13.71□□□□□ -0.21
FN1-202ENST00000336916 SYCE1Q8N0S2 351 aa13.71□□□□□ -0.21
FN1-202ENST00000336916 CCDC114Q96M63 670 aa13.71□□□□□ -0.21
FN1-202ENST00000336916 PLCB3Q01970 1234 aa13.71□□□□□ -0.21
FN1-202ENST00000336916 GALNT17Q6IS24 598 aa13.71□□□□□ -0.21
FN1-202ENST00000336916 KRT26Q7Z3Y9 468 aa13.71□□□□□ -0.21
FN1-202ENST00000336916 ANO6Q4KMQ2 910 aa13.71□□□□□ -0.22
FN1-202ENST00000336916 PSMD1Q99460 953 aa13.71□□□□□ -0.22
FN1-202ENST00000336916 E7EVH7 732 aa13.71□□□□□ -0.22
FN1-202ENST00000336916 USP48Q86UV5 1035 aa13.71□□□□□ -0.22
FN1-202ENST00000336916 FCHSD1Q86WN1 690 aa13.71□□□□□ -0.22
FN1-202ENST00000336916 ARHGEF35A5YM69 484 aa13.7□□□□□ -0.22
FN1-202ENST00000336916 CCNT1O60563 726 aaKnown RBP13.7□□□□□ -0.22
FN1-202ENST00000336916 RNF187Q5TA31 235 aaPredicted RBP13.7□□□□□ -0.22
FN1-202ENST00000336916 CHURC1Q8WUH1 139 aa13.7□□□□□ -0.22
FN1-202ENST00000336916 MAIP1Q8WWC4 291 aa13.7□□□□□ -0.22
FN1-202ENST00000336916 F13A1P00488 732 aa13.7□□□□□ -0.22
FN1-202ENST00000336916 CCDC63Q8NA47 563 aa13.7□□□□□ -0.22
FN1-202ENST00000336916 FAM212AQ96EL1 285 aa13.7□□□□□ -0.22
FN1-202ENST00000336916 HOXC9P31274 260 aa13.7□□□□□ -0.22
FN1-202ENST00000336916 SLC1A4P43007 532 aa13.7□□□□□ -0.22
FN1-202ENST00000336916 KRT25Q7Z3Z0 450 aa13.7□□□□□ -0.22
FN1-202ENST00000336916 NACA2Q9H009 215 aa13.7□□□□□ -0.22
FN1-202ENST00000336916 USH1CQ9Y6N9 552 aa13.7□□□□□ -0.22
FN1-202ENST00000336916 SYT1P21579 422 aa13.7□□□□□ -0.22
FN1-202ENST00000336916 LARGE2Q8N3Y3 721 aa13.7□□□□□ -0.22
FN1-202ENST00000336916 TSKSQ9UJT2 592 aa13.7□□□□□ -0.22
FN1-202ENST00000336916 ERBB4Q15303 1308 aa13.7□□□□□ -0.22
FN1-202ENST00000336916 FAM83GA6ND36 823 aa13.7□□□□□ -0.22
FN1-202ENST00000336916 ZKSCAN3Q9BRR0 538 aa13.7□□□□□ -0.22
FN1-202ENST00000336916 CCDC84Q86UT8 332 aaPredicted RBP13.7□□□□□ -0.22
FN1-202ENST00000336916 MLH3Q9UHC1 1453 aa13.7□□□□□ -0.22
FN1-202ENST00000336916 ERCC5P28715 1186 aaPredicted RBP13.69□□□□□ -0.22
FN1-202ENST00000336916 DAAM2Q86T65 1068 aa13.69□□□□□ -0.22
FN1-202ENST00000336916 ATP2A3Q93084 1043 aa13.69□□□□□ -0.22
FN1-202ENST00000336916 POLKQ9UBT6 870 aa13.69□□□□□ -0.22
FN1-202ENST00000336916 UTP11Q9Y3A2 253 aaKnown RBP13.69□□□□□ -0.22
FN1-202ENST00000336916 IRX3P78415 501 aaPredicted RBP13.69□□□□□ -0.22
FN1-202ENST00000336916 MXRA7P84157 204 aa13.69□□□□□ -0.22
FN1-202ENST00000336916 HAUS1Q96CS2 278 aa13.69□□□□□ -0.22
FN1-202ENST00000336916 ARPP21Q9UBL0 812 aaPredicted RBP13.69□□□□□ -0.22
FN1-202ENST00000336916 PFDN6O15212 129 aa13.69□□□□□ -0.22
FN1-202ENST00000336916 SH3BP5O60239 455 aa13.69□□□□□ -0.22
FN1-202ENST00000336916 LGSNQ5TDP6 509 aa13.69□□□□□ -0.22
FN1-202ENST00000336916 DNM3Q9UQ16 869 aa13.69□□□□□ -0.22
FN1-202ENST00000336916 ABCA8O94911 1581 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms