RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 AKNAD1Q5T1N1 836 aa20.12■□□□□ 0.81
COL9A1-201ENST00000320755 UTP14AQ9BVJ6 771 aaKnown RBP20.12■□□□□ 0.81
COL9A1-201ENST00000320755 SMTNL1A8MU46 457 aa20.11■□□□□ 0.81
COL9A1-201ENST00000320755 SMIM22K7EJ46 135 aa20.11■□□□□ 0.81
COL9A1-201ENST00000320755 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.11■□□□□ 0.81
COL9A1-201ENST00000320755 NIP7Q9Y221 180 aaKnown RBP eCLIP20.11■□□□□ 0.81
COL9A1-201ENST00000320755 MYH7P12883 1935 aa20.11■□□□□ 0.81
COL9A1-201ENST00000320755 NEMFO60524 1076 aa20.11■□□□□ 0.81
COL9A1-201ENST00000320755 JMYQ8N9B5 988 aa20.11■□□□□ 0.81
COL9A1-201ENST00000320755 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.11■□□□□ 0.81
COL9A1-201ENST00000320755 V9GYY5 206 aaPredicted RBP20.11■□□□□ 0.81
COL9A1-201ENST00000320755 ADAMTS2O95450 1211 aa20.11■□□□□ 0.81
COL9A1-201ENST00000320755 TPM4P67936 248 aa20.11■□□□□ 0.81
COL9A1-201ENST00000320755 PTPAQ15257 358 aa20.1■□□□□ 0.81
COL9A1-201ENST00000320755 LONRF3Q496Y0 759 aa20.1■□□□□ 0.81
COL9A1-201ENST00000320755 SDR42E1Q8WUS8 393 aa20.1■□□□□ 0.81
COL9A1-201ENST00000320755 IGHMBP2P38935 993 aaKnown RBP20.1■□□□□ 0.81
COL9A1-201ENST00000320755 CRKLP46109 303 aaKnown RBP20.1■□□□□ 0.81
COL9A1-201ENST00000320755 NACAP1Q9BZK3 213 aa20.1■□□□□ 0.81
COL9A1-201ENST00000320755 FOXN1O15353 648 aa20.09■□□□□ 0.81
COL9A1-201ENST00000320755 RBM6P78332 1123 aaKnown RBP20.09■□□□□ 0.81
COL9A1-201ENST00000320755 WTAPQ15007 396 aa20.09■□□□□ 0.81
COL9A1-201ENST00000320755 CNNM3Q8NE01 707 aa20.09■□□□□ 0.81
COL9A1-201ENST00000320755 MAP3K14Q99558 947 aa20.09■□□□□ 0.81
COL9A1-201ENST00000320755 hCG_1642624A0A1W2PR95 340 aa20.08■□□□□ 0.81
COL9A1-201ENST00000320755 U2AF2P26368 475 aaKnown RBP eCLIP20.08■□□□□ 0.81
COL9A1-201ENST00000320755 EIF5P55010 431 aaKnown RBP20.08■□□□□ 0.81
COL9A1-201ENST00000320755 NCAPHQ15003 741 aa20.08■□□□□ 0.81
COL9A1-201ENST00000320755 RTN1Q16799 776 aa20.08■□□□□ 0.81
COL9A1-201ENST00000320755 SGMS1Q86VZ5 419 aa20.08■□□□□ 0.81
COL9A1-201ENST00000320755 DIS3L2Q8IYB7 885 aaKnown RBP20.08■□□□□ 0.81
COL9A1-201ENST00000320755 PAXBP1Q9Y5B6 917 aa20.08■□□□□ 0.81
COL9A1-201ENST00000320755 ERICH2A1L162 156 aa20.08■□□□□ 0.81
COL9A1-201ENST00000320755 CTIFO43310 598 aaKnown RBP20.08■□□□□ 0.81
COL9A1-201ENST00000320755 SERPINC1P01008 464 aa20.08■□□□□ 0.81
COL9A1-201ENST00000320755 CYP7A1P22680 504 aa20.08■□□□□ 0.81
COL9A1-201ENST00000320755 FANCCQ00597 558 aa20.08■□□□□ 0.81
COL9A1-201ENST00000320755 GRIN1Q05586 938 aa20.08■□□□□ 0.81
COL9A1-201ENST00000320755 NCBP1Q09161 790 aaKnown RBP20.08■□□□□ 0.81
COL9A1-201ENST00000320755 INTS5Q6P9B9 1019 aaKnown RBP20.08■□□□□ 0.81
COL9A1-201ENST00000320755 PDILTQ8N807 584 aa20.08■□□□□ 0.81
COL9A1-201ENST00000320755 CCDC87Q9NVE4 849 aa20.08■□□□□ 0.81
COL9A1-201ENST00000320755 RAI14Q9P0K7 980 aa20.08■□□□□ 0.81
COL9A1-201ENST00000320755 KCNH3Q9ULD8 1083 aa20.08■□□□□ 0.81
COL9A1-201ENST00000320755 NPHP1O15259 732 aa20.08■□□□□ 0.8
COL9A1-201ENST00000320755 NR5A1Q13285 461 aa20.08■□□□□ 0.8
COL9A1-201ENST00000320755 SAFBQ15424 915 aaKnown RBP eCLIP20.08■□□□□ 0.8
COL9A1-201ENST00000320755 CCDC152Q4G0S7 254 aa20.08■□□□□ 0.8
COL9A1-201ENST00000320755 ARMCX5Q6P1M9 558 aa20.08■□□□□ 0.8
COL9A1-201ENST00000320755 CCAR2Q8N163 923 aaKnown RBP20.08■□□□□ 0.8
COL9A1-201ENST00000320755 KRT23Q9C075 422 aa20.08■□□□□ 0.8
COL9A1-201ENST00000320755 SFPQP23246 707 aaKnown RBP eCLIP20.07■□□□□ 0.8
COL9A1-201ENST00000320755 LIFRP42702 1097 aa20.07■□□□□ 0.8
COL9A1-201ENST00000320755 SART3Q15020 963 aaKnown RBP20.07■□□□□ 0.8
COL9A1-201ENST00000320755 ALX1Q15699 326 aa20.07■□□□□ 0.8
COL9A1-201ENST00000320755 TRIM22Q8IYM9 498 aa20.07■□□□□ 0.8
COL9A1-201ENST00000320755 ITGB4P16144 1822 aa20.07■□□□□ 0.8
COL9A1-201ENST00000320755 GYG1P46976 350 aa20.07■□□□□ 0.8
COL9A1-201ENST00000320755 GSDMDP57764 484 aa20.07■□□□□ 0.8
COL9A1-201ENST00000320755 CHRNDQ07001 517 aa20.07■□□□□ 0.8
COL9A1-201ENST00000320755 NOSTRINQ8IVI9 506 aa20.07■□□□□ 0.8
COL9A1-201ENST00000320755 CNNM2Q9H8M5 875 aa20.07■□□□□ 0.8
COL9A1-201ENST00000320755 ATRNO75882 1429 aa20.07■□□□□ 0.8
COL9A1-201ENST00000320755 PPP6R2O75170 966 aa20.06■□□□□ 0.8
COL9A1-201ENST00000320755 GOLGA8FQ08AF8 430 aa20.06■□□□□ 0.8
COL9A1-201ENST00000320755 GOLGA8DPQ0D2H9 430 aa20.06■□□□□ 0.8
COL9A1-201ENST00000320755 FOXP4Q8IVH2 680 aaPredicted RBP20.06■□□□□ 0.8
COL9A1-201ENST00000320755 PCDHA5Q9Y5H7 936 aa20.06■□□□□ 0.8
COL9A1-201ENST00000320755 KCNQ4P56696 695 aa20.06■□□□□ 0.8
COL9A1-201ENST00000320755 CFAP100Q494V2 611 aa20.06■□□□□ 0.8
COL9A1-201ENST00000320755 ADGRA1Q86SQ6 560 aa20.06■□□□□ 0.8
COL9A1-201ENST00000320755 DPF2Q92785 391 aa20.06■□□□□ 0.8
COL9A1-201ENST00000320755 NUP98P52948 1817 aa20.06■□□□□ 0.8
COL9A1-201ENST00000320755 FMNL1O95466 1100 aaPredicted RBP20.06■□□□□ 0.8
COL9A1-201ENST00000320755 RESP18Q5W5W9 173 aa20.06■□□□□ 0.8
COL9A1-201ENST00000320755 BICDL1Q6ZP65 573 aa20.06■□□□□ 0.8
COL9A1-201ENST00000320755 SMIM5Q71RC9 77 aa20.06■□□□□ 0.8
COL9A1-201ENST00000320755 METTL16Q86W50 562 aaKnown RBP20.06■□□□□ 0.8
COL9A1-201ENST00000320755 UBAC1Q9BSL1 405 aa20.06■□□□□ 0.8
COL9A1-201ENST00000320755 CYP2D7A0A087X1C5 515 aa20.05■□□□□ 0.8
COL9A1-201ENST00000320755 PRDM1O75626 825 aa20.05■□□□□ 0.8
COL9A1-201ENST00000320755 UBASH3AP57075 661 aa20.05■□□□□ 0.8
COL9A1-201ENST00000320755 HPSEQ9Y251 543 aa20.05■□□□□ 0.8
COL9A1-201ENST00000320755 OLFM4Q6UX06 510 aa20.05■□□□□ 0.8
COL9A1-201ENST00000320755 KRI1Q8N9T8 703 aaKnown RBP20.05■□□□□ 0.8
COL9A1-201ENST00000320755 OXER1Q8TDS5 423 aa20.05■□□□□ 0.8
COL9A1-201ENST00000320755 BPIFA3Q9BQP9 254 aa20.05■□□□□ 0.8
COL9A1-201ENST00000320755 OSBPL5Q9H0X9 879 aaPredicted RBP20.05■□□□□ 0.8
COL9A1-201ENST00000320755 IFNAR1P17181 557 aa20.04■□□□□ 0.8
COL9A1-201ENST00000320755 TOB1P50616 345 aaPredicted RBP20.04■□□□□ 0.8
COL9A1-201ENST00000320755 GRAMD1CQ8IYS0 662 aa20.04■□□□□ 0.8
COL9A1-201ENST00000320755 ANKRD7Q92527 254 aa20.04■□□□□ 0.8
COL9A1-201ENST00000320755 MYH3P11055 1940 aa20.04■□□□□ 0.8
COL9A1-201ENST00000320755 LOC102724428A0A0B4J2F2 783 aa20.04■□□□□ 0.8
COL9A1-201ENST00000320755 SIK1P57059 783 aa20.04■□□□□ 0.8
COL9A1-201ENST00000320755 ITPK1Q13572 414 aa20.04■□□□□ 0.8
COL9A1-201ENST00000320755 DDB1Q16531 1140 aa20.04■□□□□ 0.8
COL9A1-201ENST00000320755 FANCLQ9NW38 375 aa20.04■□□□□ 0.8
COL9A1-201ENST00000320755 PCDHB6Q9Y5E3 794 aa20.04■□□□□ 0.8
COL9A1-201ENST00000320755 POLR2DO15514 142 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms