RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Yeats4Q9CR11 227 aaKnown RBP8.62□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Carmil3Q3UFQ8 1375 aa8.62□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Mst1rQ62190 1378 aa8.62□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Exoc4O35382 975 aa8.62□□□□□ -1.03
Bdnf-209ENSMUST00000111050 CebpaP53566 359 aa8.62□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Tmem232Q5K6N0 675 aa8.62□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Gm21985Q6P6P5 1106 aa8.62□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Mettl5Q8K1A0 209 aa8.62□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Phldb2Q8K1N2 1249 aa8.62□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Fam173bQ9D1Z3 247 aa8.62□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Foxp4Q9DBY0 795 aaKnown RBP8.62□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Depdc5P61460 1591 aa8.62□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Rc3h1Q4VGL6 1130 aaKnown RBP8.62□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Sugp2Q8CH09 1067 aa8.62□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Alg3Q8K2A8 438 aa8.62□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Rexo5D3YW29 759 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Dapk3O54784 448 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Tubb5P99024 444 aaKnown RBP8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Tcp11Q01755 566 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Rap1gap2Q5SVL6 712 aaKnown RBP8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Bend3Q6PAL0 825 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Fmnl3Q6ZPF4 1028 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Ankib1Q6ZPS6 1085 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Dhx38Q80X98 1228 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Ddx42Q810A7 929 aaKnown RBP8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Dnajc28Q8VCE1 385 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Six6os1Q9CTN5 574 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Riok3Q9DBU3 519 aaKnown RBP8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Pus3Q9JI38 481 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Entpd5Q9WUZ9 427 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 PtprmP28828 1452 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Gemin5Q8BX17 1502 aaKnown RBP8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Gspt2Q149F3 632 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Matr3Q8K310 846 aaKnown RBP8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Vmn1r218Q8R261 298 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Gle1Q8R322 699 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 BrapQ99MP8 591 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Baiap2l1Q9DBJ3 514 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 PhaxQ9JJT9 385 aaKnown RBP8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 AdnpQ9Z103 1108 aaKnown RBP8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Sycp2lA0A0M3U1B0 842 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Tpm3-rs7D3Z2H9 248 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Tubb4bP68372 445 aaKnown RBP8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Gucy2cQ3UWA6 1072 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Tab3Q571K4 716 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 A1cfQ5YD48 595 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Nab2Q61127 525 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Pcdhb14Q6PB90 796 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Tubb2aQ7TMM9 445 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Epn1Q80VP1 575 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Tubb2bQ9CWF2 445 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Akap8Q9DBR0 687 aaKnown RBP8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Hsd3b7Q9EQC1 369 aa8.61□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Pnpla7A2AJ88 1352 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Znf518aB2RRF6 1478 aaKnown RBP8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Arhgap23Q69ZH9 1483 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Il27raO70394 623 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Neurod6P48986 337 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Gm28047Q3US59 414 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Luc7l2Q7TNC4 392 aaKnown RBP8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Ptcd1Q8C2E4 695 aaKnown RBP8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Tldc1Q8K0P3 455 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 ParnQ8VDG3 624 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Orc1Q9Z1N2 840 aaKnown RBP8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Cdc45Q9Z1X9 566 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Igsf1Q7TQA1 1317 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Zfp275G3X904 499 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 CltaO08585 235 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Tmem165P52875 323 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Cd37Q61470 281 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Spag7Q7TNE3 227 aaKnown RBP8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Rassf2Q8BMS9 326 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Nek11Q8C0Q4 628 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 MyripQ8K3I4 856 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Eif3hQ91WK2 352 aaKnown RBP8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Wdr17E9Q271 1322 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Atf5O70191 283 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Nek1P51954 1203 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Bcl2l13P59017 434 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Ddx46Q569Z5 1032 aaKnown RBP8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Ankrd24Q80VM7 985 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Acnat2Q8BGG9 420 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Hps6Q8BLY7 805 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Larp6Q8BN59 492 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Fam193aQ8CGI1 1231 aaKnown RBP8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Eps8l2Q99K30 729 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Plekho1Q9JIY0 408 aa8.6□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Zbtb21E9Q444 1094 aa8.59□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Sox5P35710 763 aa8.59□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Capza3P70190 299 aa8.59□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Als2cr12Q8BVM7 383 aa8.59□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Lmbrd2Q8C561 694 aa8.59□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Mfap3lQ9D3X9 409 aa8.59□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Ascc1Q9D8Z1 356 aaKnown RBP8.59□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Clip2Q9Z0H8 1047 aa8.59□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Myo5bP21271 1818 aa8.59□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Rbbp8nlA2ABX0 614 aa8.59□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Pfkfb2P70265 519 aa8.59□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Ezh2Q61188 746 aaKnown RBP8.59□□□□□ -1.03
Bdnf-209ENSMUST00000111050 Cct6bQ61390 531 aa8.59□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms