RNA–Protein interactions for RNA: ENSMUST00000027404.11

Ptprn-201, Transcript of Receptor-type tyrosine-protein phosphatase-like N, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptprn, Length 3,554 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptprn-201ENSMUST00000027404 Ranbp6Q8BIV3 1105 aa18.36■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Kri1Q8VDQ9 704 aaKnown RBP18.36■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Alpk3Q924C5 1678 aa18.35■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Evi5P97366 809 aa18.35■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Ccdc57Q6PHN1 1016 aa18.35■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Ufl1Q8CCJ3 793 aaKnown RBP18.35■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Etnk1Q9D4V0 363 aa18.35■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Cdc27A2A6Q5 825 aa18.35■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Pet2A2AHY8 747 aa18.35■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Prr29B1ARI9 187 aa18.35■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Specc1lQ2KN98 1118 aaKnown RBP18.35■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Brd3Q8K2F0 726 aaKnown RBP18.35■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Iqca1Q9CUL5 857 aa18.35■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Fbxl16A2RT62 479 aa18.35■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Pde4bB1AWC9 736 aa18.35■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Lrrc6O88978 473 aa18.35■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Nat10Q8K224 1024 aaKnown RBP18.35■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Rapgef3Q8VCC8 918 aa18.35■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Ppp4r3bQ922R5 820 aa18.35■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Ctdp1Q7TSG2 960 aa18.34■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Ehd4Q9EQP2 541 aa18.34■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Pde8bE9Q4S1 865 aa18.34■□□□□ 0.53
Ptprn-201ENSMUST00000027404 TbcaP48428 108 aaKnown RBP18.34■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Prkag3Q8BGM7 489 aa18.34■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Pcdhb22Q91XZ8 794 aa18.34■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Slf2Q6P9P0 1278 aa18.34■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Mast3Q3U214 1321 aa18.33■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Tbc1d2B1AVH7 922 aa18.33■□□□□ 0.53
Ptprn-201ENSMUST00000027404 EmbP21995 330 aa18.33■□□□□ 0.53
Ptprn-201ENSMUST00000027404 H2afxP27661 143 aaKnown RBP18.33■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Usp13Q5BKP2 858 aa18.33■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Jakmip3Q5DTN8 844 aa18.33■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Dpf2Q61103 391 aaKnown RBP18.33■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Secisbp2lQ6A098 1086 aaKnown RBP18.33■□□□□ 0.53
Ptprn-201ENSMUST00000027404 Rims2Q9EQZ7 1530 aa18.33■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Washc1Q8VDD8 475 aa18.33■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Cyp3a59D3Z2W7 503 aa18.32■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Gcom1E9PZ54 550 aa18.32■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Ccng2O08918 344 aa18.32■□□□□ 0.52
Ptprn-201ENSMUST00000027404 MyzapQ3UIJ9 466 aa18.32■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Cdkl5Q3UTQ8 938 aa18.32■□□□□ 0.52
Ptprn-201ENSMUST00000027404 BcorQ8CGN4 1759 aa18.32■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Atp8a2P98200 1148 aa18.32■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Luc7l2Q7TNC4 392 aaKnown RBP18.32■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Ttc12Q8BW49 704 aa18.32■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Prc1Q99K43 603 aaKnown RBP18.32■□□□□ 0.52
Ptprn-201ENSMUST00000027404 PdclQ9DBX2 301 aa18.32■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Hdac6Q9Z2V5 1149 aa18.32■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Rsph10bE9PYQ0 876 aa18.32■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Mctp2Q5RJH2 878 aa18.32■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Fam193aQ8CGI1 1231 aaKnown RBP18.32■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Smc1bQ920F6 1248 aa18.32■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Rgs12Q8CGE9 1381 aa18.31■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Exoc3l2D3YUP5 789 aa18.31■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Gm42641I6L9G2 585 aa18.31■□□□□ 0.52
Ptprn-201ENSMUST00000027404 AtripQ8BMG1 785 aa18.31■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Tmem143Q8VD26 458 aa18.31■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Ccdc39Q9D5Y1 937 aa18.31■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Eif2ak3Q9Z2B5 1114 aa18.31■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Cyp2j7A0A140T8U1 504 aa18.31■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Prl3d1P18121 224 aa18.31■□□□□ 0.52
Ptprn-201ENSMUST00000027404 BaatQ91X34 420 aa18.31■□□□□ 0.52
Ptprn-201ENSMUST00000027404 SfswapQ3USH5 945 aaKnown RBP18.31■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Adck5Q80V03 582 aa18.31■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Fam53cQ8BXQ8 393 aa18.31■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Trim11Q99PQ2 467 aa18.31■□□□□ 0.52
Ptprn-201ENSMUST00000027404 WtapQ9ER69 396 aa18.31■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Sept1P42209 366 aa18.3■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Rtn1Q8K0T0 780 aa18.3■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Tada3Q8R0L9 432 aa18.3■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Rapgef4Q9EQZ6 1011 aa18.3■□□□□ 0.52
Ptprn-201ENSMUST00000027404 EcsitQ9QZH6 435 aa18.3■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Sycp2lA0A0M3U1B0 842 aa18.3■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Ccdc150Q8CDI7 1110 aa18.3■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Ccdc191J3QQ27 883 aa18.3■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Exoc8Q6PGF7 716 aa18.3■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Pcdhgc5Q91XW9 944 aa18.3■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Riok1Q922Q2 567 aa18.3■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Mroh6V9GX81 722 aa18.3■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Trim30cD3YVI9 513 aa18.29■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Pde11aP0C1Q2 933 aa18.29■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Abtb2Q7TQI7 1024 aa18.29■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Map3k11Q80XI6 850 aa18.29■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Telo2Q9DC40 840 aaKnown RBP18.29■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Carmil3Q3UFQ8 1375 aa18.29■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Sun3Q5SS91 320 aa18.29■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Ubac1Q8VDI7 409 aa18.29■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Mtmr6Q8VE11 617 aa18.29■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Plekho1Q9JIY0 408 aa18.29■□□□□ 0.52
Ptprn-201ENSMUST00000027404 GdaQ9R111 454 aa18.29■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Pard3Q99NH2 1333 aa18.29■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Shank2Q80Z38 1476 aa18.29■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Ccdc174Q3U155 467 aa18.29■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Ccdc93Q7TQK5 629 aa18.29■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Tcp11l1Q8BTG3 509 aa18.29■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Cd209bQ8CJ91 325 aa18.29■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Golga5Q9QYE6 729 aa18.29■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Rgs22G3UYX5 1258 aa18.28■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Gm21969J3QJZ1 289 aa18.28■□□□□ 0.52
Ptprn-201ENSMUST00000027404 Ccp110Q7TSH4 1004 aa18.28■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 26.1 ms